Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 6-352 |
| Cow position: | chr24:30766102-30765742 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 185 |
| Conread position: | 10-386 |
| Cow position: | chr24:18222704-18223095 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 251 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 15-390 |
| Cow position: | chr24:6054742-6055130 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 86-389 |
| Cow position: | chr24:22047377-22047687 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 75, 94 |
| Conread position: | 91-352 |
| Cow position: | chr24:26795107-26794835 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-352 |
| Cow position: | chr24:31357276-31357009 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-375 |
| Cow position: | chr24:7596872-7597163 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr24:207310-207614 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 104, 43 |
| Conread position: | 91-389 |
| Cow position: | chr24:10035353-10035662 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr24:11207916-11208225 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr24:18740678-18740987 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr24:38296747-38296438 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr24:40428003-40428312 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-393 |
| Cow position: | chr24:27345205-27345518 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 112-334 |
| Cow position: | chr24:23715186-23715414 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 49, 40 |
| Conread position: | 112-358 |
| Cow position: | chr24:17752579-17752833 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 112-386 |
| Cow position: | chr24:32608981-32608697 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 112-394 |
| Cow position: | chr24:27761727-27761441 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 113-305 |
| Cow position: | chr24:25087253-25087051 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 43, 160 |
| Conread position: | 113-313 |
| Cow position: | chr24:10646179-10646384 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 113-314 |
| Cow position: | chr24:18630155-18629951 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 69 |
| Conread position: | 113-337 |
| Cow position: | chr24:42585242-42585015 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 49, 73 |
| Conread position: | 113-351 |
| Cow position: | chr24:26792930-26793176 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 113-354 |
| Cow position: | chr24:25100808-25101056 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 48, 77 |
| Conread position: | 114-364 |
| Cow position: | chr24:37887005-37886750 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 115-314 |
| Cow position: | chr24:31793238-31793034 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 115-391 |
| Cow position: | chr24:43777676-43777403 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 116-375 |
| Cow position: | chr24:11081117-11081384 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 116-375 |
| Cow position: | chr24:12447157-12446890 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 116-386 |
| Cow position: | chr24:15793352-15793631 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 48, 273 |
| Conread position: | 116-389 |
| Cow position: | chr24:5990522-5990805 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 116-389 |
| Cow position: | chr24:25372768-25372485 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 118-386 |
| Cow position: | chr24:20283548-20283826 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 123-336 |
| Cow position: | chr24:31050611-31050394 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 123-389 |
| Cow position: | chr24:12198697-12198973 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 29, 269 |
| Conread position: | 127-386 |
| Cow position: | chr24:32853867-32853598 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 34, 263 |
| Conread position: | 130-353 |
| Cow position: | chr24:31706965-31707184 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 10, 15 |
Show alignments to all cow chromosomes.