Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 16-359 |
| Cow position: | chr27:15306634-15306987 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 80, 42 |
| Conread position: | 19-424 |
| Cow position: | chr27:12114808-12115207 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 274 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 84, 24 |
| Conread position: | 46-352 |
| Cow position: | chr27:723999-723682 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 106, 143 |
| Conread position: | 91-386 |
| Cow position: | chr27:13182691-13182991 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 196 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-386 |
| Cow position: | chr27:15033293-15033597 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 296 |
| Conread position: | 91-386 |
| Cow position: | chr27:19523111-19523415 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 296 |
| Conread position: | 91-389 |
| Cow position: | chr27:2001443-2001135 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 56 |
| Conread position: | 91-389 |
| Cow position: | chr27:3650080-3649771 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-389 |
| Cow position: | chr27:12006747-12006438 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr27:30306667-30306979 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 108 |
| Conread position: | 113-307 |
| Cow position: | chr27:8320115-8319916 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 113-324 |
| Cow position: | chr27:22208781-22209000 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 113-373 |
| Cow position: | chr27:14999317-14999589 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 49, 74 |
| Conread position: | 113-465 |
| Cow position: | chr27:12554969-12555318 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 47, 66 |
| Conread position: | 116-354 |
| Cow position: | chr27:15871758-15872004 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-358 |
| Cow position: | chr27:13422590-13422843 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 117-363 |
| Cow position: | chr27:27152235-27151985 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 62 |
| Conread position: | 117-386 |
| Cow position: | chr27:11481504-11481225 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 273 |
| Conread position: | 117-386 |
| Cow position: | chr27:27291966-27291687 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 77 |
| Conread position: | 117-387 |
| Cow position: | chr27:8201509-8201228 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 41, 272 |
| Conread position: | 117-489 |
| Cow position: | chr27:29811874-29811484 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 253 |
| Conread position: | 118-379 |
| Cow position: | chr27:9333239-9332967 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 118-403 |
| Cow position: | chr27:12751103-12750812 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 102 |
| Conread position: | 123-389 |
| Cow position: | chr27:9970738-9970461 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 66 |
Show alignments to all cow chromosomes.