Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 10-385 |
| Cow position: | chr29:34314233-34314614 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 70, 121 |
| Conread position: | 16-386 |
| Cow position: | chr29:19761748-19761370 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 8 |
| Conread position: | 16-388 |
| Cow position: | chr29:43625939-43626309 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 136, 68 |
| Conread position: | 19-331 |
| Cow position: | chr29:19400295-19399972 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 96, 74 |
| Conread position: | 20-386 |
| Cow position: | chr29:8623529-8623897 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 91, 63 |
| Conread position: | 91-375 |
| Cow position: | chr29:19891178-19890885 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 95 |
| Conread position: | 91-382 |
| Cow position: | chr29:27814392-27814102 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 101 |
| Conread position: | 91-386 |
| Cow position: | chr29:14207952-14208256 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 242 |
| Conread position: | 91-386 |
| Cow position: | chr29:19398275-19397971 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 68, 98 |
| Conread position: | 91-389 |
| Cow position: | chr29:2461772-2461463 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr29:11119096-11119405 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr29:13623758-13624067 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr29:27702693-27702384 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr29:32292210-32291901 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr29:32329644-32329953 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr29:35265533-35265224 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 91-389 |
| Cow position: | chr29:40157360-40157051 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr29:42255363-42255671 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-391 |
| Cow position: | chr29:28696764-28697074 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 103 |
| Conread position: | 105-408 |
| Cow position: | chr29:4480792-4481100 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 56, 84 |
| Conread position: | 112-314 |
| Cow position: | chr29:18365032-18365241 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 112-354 |
| Cow position: | chr29:3284910-3284666 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 83, 67 |
| Conread position: | 112-375 |
| Cow position: | chr29:20642071-20641805 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 113-388 |
| Cow position: | chr29:34120921-34121200 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 113-389 |
| Cow position: | chr29:18011169-18010882 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 115-319 |
| Cow position: | chr29:20624845-20625058 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 71 |
| Conread position: | 116-358 |
| Cow position: | chr29:528926-529179 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 116-389 |
| Cow position: | chr29:1479042-1478758 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 116-389 |
| Cow position: | chr29:32556153-32556437 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 118-371 |
| Cow position: | chr29:2694289-2694026 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 118-375 |
| Cow position: | chr29:32543722-32543459 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 123-375 |
| Cow position: | chr29:23980289-23980031 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 38, 66 |
| Conread position: | 127-337 |
| Cow position: | chr29:22634473-22634252 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 25, 62 |
Show alignments to all cow chromosomes.