Cow genome map

Conread name: ruio04_d15.y1

Conread position: 10-358
Cow position: chr5:49817054-49816700 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 176

Conread position: 62-306
Cow position: chr5:66982534-66982279 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 14

Conread position: 74-405
Cow position: chr5:39936549-39936211 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 219
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 27

Conread position: 91-352
Cow position: chr5:68273414-68273686 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 98

Conread position: 91-354
Cow position: chr5:75008636-75008903 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 97

Conread position: 91-365
Cow position: chr5:54360686-54360971 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 186
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-373
Cow position: chr5:31217523-31217235 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 70, 98

Conread position: 91-386
Cow position: chr5:6151397-6151702 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 297

Conread position: 91-386
Cow position: chr5:18557983-18558278 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 199
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 169

Conread position: 91-386
Cow position: chr5:49116916-49117221 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 70, 301

Conread position: 91-389
Cow position: chr5:445914-445605 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr5:6455228-6455537 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr5:6694969-6694660 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr5:25913153-25912843 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 202
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 97

Conread position: 91-389
Cow position: chr5:26053166-26052857 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr5:28013292-28012983 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr5:36369557-36369866 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr5:57335929-57336238 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr5:58900609-58900918 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chr5:73485453-73485760 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 91-396
Cow position: chr5:21188365-21188054 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 197
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 94

Conread position: 105-386
Cow position: chr5:59782350-59782632 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 54

Conread position: 112-319
Cow position: chr5:40648935-40648721 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 74

Conread position: 112-330
Cow position: chr5:28700523-28700746 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 52, 77

Conread position: 112-350
Cow position: chr5:38379401-38379157 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 117

Conread position: 112-350
Cow position: chr5:48409044-48409284 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 74

Conread position: 113-311
Cow position: chr5:20430734-20430528 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 71

Conread position: 113-313
Cow position: chr5:69753213-69753424 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 48, 78

Conread position: 113-354
Cow position: chr5:59862116-59862360 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 48, 67

Conread position: 113-387
Cow position: chr5:21220419-21220703 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 76

Conread position: 114-371
Cow position: chr5:2480907-2481166 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 82, 71

Conread position: 114-386
Cow position: chr5:15677468-15677191 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 72

Conread position: 115-317
Cow position: chr5:25638627-25638832 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 45

Conread position: 115-371
Cow position: chr5:54170179-54169916 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 46, 71

Conread position: 116-375
Cow position: chr5:24102060-24101790 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 116-386
Cow position: chr5:7175708-7175428 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 274

Conread position: 117-386
Cow position: chr5:24299422-24299143 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 186
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 271

Conread position: 117-386
Cow position: chr5:53185095-53185373 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 24

Conread position: 117-386
Cow position: chr5:58770463-58770742 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 271

Conread position: 118-386
Cow position: chr5:7498577-7498855 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 181
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 270

Conread position: 118-386
Cow position: chr5:10922253-10921975 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 71

Conread position: 118-386
Cow position: chr5:55631472-55631194 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 263

Conread position: 124-386
Cow position: chr5:1338522-1338791 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 261

Show alignments to all cow chromosomes.