Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 15-317 |
| Cow position: | chr7:58644248-58643930 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 15-352 |
| Cow position: | chr7:50657756-50658123 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 75, 26 |
| Conread position: | 20-364 |
| Cow position: | chr7:22879770-22879413 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 91-313 |
| Cow position: | chr7:55289916-55290146 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 101 |
| Conread position: | 91-332 |
| Cow position: | chr7:21877057-21877310 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 187 |
| Conread position: | 91-358 |
| Cow position: | chr7:21423703-21423981 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 180 |
| Conread position: | 91-358 |
| Cow position: | chr7:53992135-53991870 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 98 |
| Conread position: | 91-375 |
| Cow position: | chr7:21990308-21990013 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-386 |
| Cow position: | chr7:54484-54789 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-386 |
| Cow position: | chr7:8140417-8140722 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 297 |
| Conread position: | 91-386 |
| Cow position: | chr7:54807684-54807988 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-386 |
| Cow position: | chr7:60726788-60727093 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 297 |
| Conread position: | 91-389 |
| Cow position: | chr7:845587-845278 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr7:7249100-7249409 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 98 |
| Conread position: | 91-389 |
| Cow position: | chr7:14131774-14131465 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr7:18865658-18865349 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr7:22598681-22598372 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr7:33308578-33308887 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 92 |
| Conread position: | 91-389 |
| Cow position: | chr7:49217417-49217107 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-389 |
| Cow position: | chr7:54822756-54823065 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr7:62766602-62766293 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr7:65556753-65557061 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr7:65712312-65712003 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-396 |
| Cow position: | chr7:34229066-34229382 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 91-396 |
| Cow position: | chr7:60279252-60279568 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 112-350 |
| Cow position: | chr7:24549100-24548870 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 9 |
| Conread position: | 112-375 |
| Cow position: | chr7:63771321-63771046 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 77 |
| Conread position: | 112-392 |
| Cow position: | chr7:32283321-32283035 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 97, 169 |
| Conread position: | 113-374 |
| Cow position: | chr7:29603784-29603512 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 113-386 |
| Cow position: | chr7:33962744-33963020 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 113-394 |
| Cow position: | chr7:29748677-29748384 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 114-358 |
| Cow position: | chr7:21227250-21227497 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 114-362 |
| Cow position: | chr7:21914810-21914567 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 47, 126 |
| Conread position: | 115-363 |
| Cow position: | chr7:65134854-65135103 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 80, 70 |
| Conread position: | 116-386 |
| Cow position: | chr7:24827468-24827188 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-389 |
| Cow position: | chr7:12773548-12773264 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 67 |
| Conread position: | 117-386 |
| Cow position: | chr7:53070760-53070482 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 44, 156 |
| Conread position: | 118-386 |
| Cow position: | chr7:16934943-16934664 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 271 |
| Conread position: | 118-386 |
| Cow position: | chr7:19463215-19463487 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 264 |
| Conread position: | 118-386 |
| Cow position: | chr7:29474067-29473799 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 43, 157 |
| Conread position: | 118-386 |
| Cow position: | chr7:46749620-46749342 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 270 |
| Conread position: | 123-386 |
| Cow position: | chr7:55534286-55534559 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 38, 267 |
| Conread position: | 123-389 |
| Cow position: | chr7:66908875-66908600 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 35, 12 |
Show alignments to all cow chromosomes.