Cow genome map
| Conread name: | ruio04_d15.y1 |
| Conread position: | 13-322 |
| Cow position: | chr8:31624839-31624508 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 36, 58 |
| Conread position: | 15-371 |
| Cow position: | chr8:5663546-5663910 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 86-389 |
| Cow position: | chr8:22531371-22531685 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 75, 103 |
| Conread position: | 91-352 |
| Cow position: | chr8:18296422-18296694 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-352 |
| Cow position: | chr8:60800619-60800891 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-353 |
| Cow position: | chr8:38402210-38401937 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-358 |
| Cow position: | chr8:817326-817053 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 67, 98 |
| Conread position: | 91-358 |
| Cow position: | chr8:51019309-51019587 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-375 |
| Cow position: | chr8:21989950-21989655 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-375 |
| Cow position: | chr8:22030960-22030669 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-375 |
| Cow position: | chr8:22376339-22376633 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 276 |
| Conread position: | 91-386 |
| Cow position: | chr8:17200168-17200471 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 89 |
| Conread position: | 91-386 |
| Cow position: | chr8:61197419-61197726 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 51, 303 |
| Conread position: | 91-389 |
| Cow position: | chr8:4614781-4615090 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 180 |
| Conread position: | 91-389 |
| Cow position: | chr8:5195962-5195653 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:8382248-8381939 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:10752198-10751889 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:12077959-12078268 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:13931091-13931400 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 99 |
| Conread position: | 91-389 |
| Cow position: | chr8:16194968-16194659 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:25065770-25065461 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:26879388-26879079 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:33045153-33045462 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 61, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:39141494-39141185 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:42317419-42317728 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:49964073-49964382 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:50799973-50800282 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:53120288-53120597 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 91-389 |
| Cow position: | chr8:53838781-53838472 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:54015665-54015356 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-389 |
| Cow position: | chr8:60769553-60769862 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-396 |
| Cow position: | chr8:1508484-1508800 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-397 |
| Cow position: | chr8:40584918-40584601 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 91-442 |
| Cow position: | chr8:50762243-50761884 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 98 |
| Conread position: | 113-322 |
| Cow position: | chr8:22153664-22153877 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 76 |
| Conread position: | 113-336 |
| Cow position: | chr8:21343548-21343316 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 75 |
| Conread position: | 113-352 |
| Cow position: | chr8:45567686-45567929 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 39, 76 |
| Conread position: | 113-360 |
| Cow position: | chr8:33094175-33093933 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 113-423 |
| Cow position: | chr8:33174164-33174472 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 115-252 |
| Cow position: | chr8:31197323-31197466 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 115-307 |
| Cow position: | chr8:28326479-28326674 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 70 |
| Conread position: | 115-364 |
| Cow position: | chr8:12455013-12454763 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 25 |
| Conread position: | 115-390 |
| Cow position: | chr8:30346925-30346641 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 79 |
| Conread position: | 116-352 |
| Cow position: | chr8:46625572-46625325 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-385 |
| Cow position: | chr8:41745764-41746019 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 178, 35 |
| Conread position: | 116-389 |
| Cow position: | chr8:6588209-6588493 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 116-389 |
| Cow position: | chr8:55270703-55270987 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 73 |
| Conread position: | 117-386 |
| Cow position: | chr8:4690221-4689945 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 268 |
| Conread position: | 117-386 |
| Cow position: | chr8:12795211-12794933 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 35, 72 |
| Conread position: | 117-386 |
| Cow position: | chr8:19053107-19052829 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 270 |
| Conread position: | 117-386 |
| Cow position: | chr8:32314807-32315083 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 35, 218 |
| Conread position: | 117-394 |
| Cow position: | chr8:39192086-39192374 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 118-386 |
| Cow position: | chr8:8469101-8468819 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 39, 276 |
| Conread position: | 118-386 |
| Cow position: | chr8:17315413-17315139 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 183 |
| Conread position: | 118-386 |
| Cow position: | chr8:18568086-18568357 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 139 |
| Conread position: | 118-414 |
| Cow position: | chr8:46843493-46843798 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 222 |
| Conread position: | 123-354 |
| Cow position: | chr8:21152500-21152727 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 123-385 |
| Cow position: | chr8:38561641-38561899 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 87 |
| Conread position: | 123-386 |
| Cow position: | chr8:60267185-60266912 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 38, 265 |
Show alignments to all cow chromosomes.