Cow genome map
Conread name: | ruio04_d15.y1 |
Conread position: | 2-354 |
Cow position: | chrX:25144599-25144241 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 255 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 97, 194 |
Conread position: | 10-422 |
Cow position: | chrX:8421757-8421335 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 274 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 74, 220 |
Conread position: | 19-311 |
Cow position: | chrX:37960104-37959795 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 218 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 80, 36 |
Conread position: | 30-380 |
Cow position: | chrX:37753867-37753525 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 228 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 60, 79 |
Conread position: | 91-350 |
Cow position: | chrX:30825059-30824789 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 180 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 61, 98 |
Conread position: | 91-358 |
Cow position: | chrX:29225889-29225611 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 183 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 71, 98 |
Conread position: | 91-375 |
Cow position: | chrX:23452034-23452329 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 189 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 91-386 |
Cow position: | chrX:7572792-7572497 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 196 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 59, 53 |
Conread position: | 91-386 |
Cow position: | chrX:18898238-18898543 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 199 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 70, 297 |
Conread position: | 91-386 |
Cow position: | chrX:21226888-21226582 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 195 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 91-386 |
Cow position: | chrX:21582853-21582549 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 198 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 70, 296 |
Conread position: | 91-386 |
Cow position: | chrX:23341581-23341885 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 194 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 70, 289 |
Conread position: | 91-386 |
Cow position: | chrX:25282082-25282388 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 203 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 68, 300 |
Conread position: | 91-386 |
Cow position: | chrX:27318642-27318337 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 196 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 70, 297 |
Conread position: | 91-386 |
Cow position: | chrX:38151099-38150794 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 196 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 70, 298 |
Conread position: | 91-386 |
Cow position: | chrX:41156722-41156417 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 198 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 70, 247 |
Conread position: | 91-389 |
Cow position: | chrX:2293189-2293498 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 201 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:4343162-4342853 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 197 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:5646693-5647002 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 198 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:8529951-8529642 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 200 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:11408923-11409232 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 200 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:11566325-11566016 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 199 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:13030800-13031109 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 197 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:15260208-15260517 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 198 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 61, 98 |
Conread position: | 91-389 |
Cow position: | chrX:16086712-16087021 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 198 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 91-389 |
Cow position: | chrX:17782910-17782602 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 197 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 70, 44 |
Conread position: | 91-389 |
Cow position: | chrX:18488303-18488612 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 199 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:28313836-28313527 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 198 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:30199581-30199890 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 200 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:32643897-32643588 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 202 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-389 |
Cow position: | chrX:39185584-39185275 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 198 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-393 |
Cow position: | chrX:14458756-14459069 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 197 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 91-396 |
Cow position: | chrX:10059876-10059560 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 201 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-396 |
Cow position: | chrX:25289268-25289584 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 203 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-396 |
Cow position: | chrX:36729795-36729479 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 205 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 70, 98 |
Conread position: | 91-406 |
Cow position: | chrX:19657908-19657585 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 207 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 70, 312 |
Conread position: | 109-389 |
Cow position: | chrX:16325136-16325424 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 193 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 52, 80 |
Conread position: | 112-382 |
Cow position: | chrX:16061067-16061350 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 190 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 48, 82 |
Conread position: | 112-385 |
Cow position: | chrX:18247739-18247463 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 190 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 47, 76 |
Conread position: | 112-386 |
Cow position: | chrX:16782670-16782386 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 189 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 49, 77 |
Conread position: | 112-386 |
Cow position: | chrX:37832083-37832359 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 185 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 49, 7 |
Conread position: | 112-392 |
Cow position: | chrX:18455392-18455671 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 182 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 73, 65 |
Conread position: | 112-474 |
Cow position: | chrX:41106619-41106996 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 249 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 48, 28 |
Conread position: | 113-314 |
Cow position: | chrX:37681922-37682133 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 154 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 39, 83 |
Conread position: | 113-360 |
Cow position: | chrX:28820125-28819885 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 179 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 47, 76 |
Conread position: | 113-396 |
Cow position: | chrX:38569869-38569578 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 200 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 51, 267 |
Conread position: | 114-289 |
Cow position: | chrX:33767406-33767229 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 47, 72 |
Conread position: | 115-491 |
Cow position: | chrX:42041999-42042378 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 251 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 46, 74 |
Conread position: | 116-386 |
Cow position: | chrX:20953919-20953639 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 184 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 45, 276 |
Conread position: | 116-386 |
Cow position: | chrX:24280289-24280026 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 186 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 45, 14 |
Conread position: | 116-389 |
Cow position: | chrX:35533240-35532957 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 187 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 73 |
Conread position: | 116-389 |
Cow position: | chrX:36479249-36479533 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 186 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 73 |
Conread position: | 116-391 |
Cow position: | chrX:6026314-6026597 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 202 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 45, 73 |
Conread position: | 117-357 |
Cow position: | chrX:2274302-2274054 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 167 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 44, 69 |
Conread position: | 117-386 |
Cow position: | chrX:30455237-30455514 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 183 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 44, 117 |
Conread position: | 119-386 |
Cow position: | chrX:23387155-23387432 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 183 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 42, 269 |
Conread position: | 119-386 |
Cow position: | chrX:23395990-23395713 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 182 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 42, 269 |
Conread position: | 124-429 |
Cow position: | chrX:19880377-19880067 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 206 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 37, 221 |
Show alignments to all cow chromosomes.