Cow genome map

Conread name: ruio04_d15.y1

Conread position: 2-354
Cow position: chrX:25144599-25144241 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 97, 194

Conread position: 10-422
Cow position: chrX:8421757-8421335 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 274
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 220

Conread position: 19-311
Cow position: chrX:37960104-37959795 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 80, 36

Conread position: 30-380
Cow position: chrX:37753867-37753525 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 228
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 79

Conread position: 91-350
Cow position: chrX:30825059-30824789 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 98

Conread position: 91-358
Cow position: chrX:29225889-29225611 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 71, 98

Conread position: 91-375
Cow position: chrX:23452034-23452329 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 189
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 91-386
Cow position: chrX:7572792-7572497 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 53

Conread position: 91-386
Cow position: chrX:18898238-18898543 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 297

Conread position: 91-386
Cow position: chrX:21226888-21226582 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 195
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 91-386
Cow position: chrX:21582853-21582549 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 296

Conread position: 91-386
Cow position: chrX:23341581-23341885 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 194
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 289

Conread position: 91-386
Cow position: chrX:25282082-25282388 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 203
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 68, 300

Conread position: 91-386
Cow position: chrX:27318642-27318337 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 297

Conread position: 91-386
Cow position: chrX:38151099-38150794 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 196
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 298

Conread position: 91-386
Cow position: chrX:41156722-41156417 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 247

Conread position: 91-389
Cow position: chrX:2293189-2293498 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:4343162-4342853 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 197
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:5646693-5647002 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:8529951-8529642 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:11408923-11409232 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:11566325-11566016 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:13030800-13031109 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 197
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:15260208-15260517 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 98

Conread position: 91-389
Cow position: chrX:16086712-16087021 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 198
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 91-389
Cow position: chrX:17782910-17782602 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 197
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 44

Conread position: 91-389
Cow position: chrX:18488303-18488612 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 199
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:28313836-28313527 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:30199581-30199890 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:32643897-32643588 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 70, 98

Conread position: 91-389
Cow position: chrX:39185584-39185275 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-393
Cow position: chrX:14458756-14459069 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 197
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 91-396
Cow position: chrX:10059876-10059560 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 201
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 70, 98

Conread position: 91-396
Cow position: chrX:25289268-25289584 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 203
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 70, 98

Conread position: 91-396
Cow position: chrX:36729795-36729479 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 205
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 98

Conread position: 91-406
Cow position: chrX:19657908-19657585 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 207
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 312

Conread position: 109-389
Cow position: chrX:16325136-16325424 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 80

Conread position: 112-382
Cow position: chrX:16061067-16061350 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 190
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 82

Conread position: 112-385
Cow position: chrX:18247739-18247463 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 76

Conread position: 112-386
Cow position: chrX:16782670-16782386 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 77

Conread position: 112-386
Cow position: chrX:37832083-37832359 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 7

Conread position: 112-392
Cow position: chrX:18455392-18455671 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 182
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 65

Conread position: 112-474
Cow position: chrX:41106619-41106996 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 28

Conread position: 113-314
Cow position: chrX:37681922-37682133 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 83

Conread position: 113-360
Cow position: chrX:28820125-28819885 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 76

Conread position: 113-396
Cow position: chrX:38569869-38569578 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 200
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 51, 267

Conread position: 114-289
Cow position: chrX:33767406-33767229 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 72

Conread position: 115-491
Cow position: chrX:42041999-42042378 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 251
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 46, 74

Conread position: 116-386
Cow position: chrX:20953919-20953639 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 276

Conread position: 116-386
Cow position: chrX:24280289-24280026 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 14

Conread position: 116-389
Cow position: chrX:35533240-35532957 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 73

Conread position: 116-389
Cow position: chrX:36479249-36479533 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 73

Conread position: 116-391
Cow position: chrX:6026314-6026597 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 73

Conread position: 117-357
Cow position: chrX:2274302-2274054 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 69

Conread position: 117-386
Cow position: chrX:30455237-30455514 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 183
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 117

Conread position: 119-386
Cow position: chrX:23387155-23387432 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 183
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 269

Conread position: 119-386
Cow position: chrX:23395990-23395713 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 269

Conread position: 124-429
Cow position: chrX:19880377-19880067 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 221

Show alignments to all cow chromosomes.