Cow genome map
| Conread name: | ruio12_b3.y1 | 
| Conread position: | 158-265 | 
| Cow position: | chr3:24644546-24644441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 158-265 | 
| Cow position: | chr3:53516926-53516821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 158-268 | 
| Cow position: | chr3:49136243-49136351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 158-268 | 
| Cow position: | chr3:64016043-64016152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 54, 27 | 
| Conread position: | 158-269 | 
| Cow position: | chr3:24588142-24588251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 158-272 | 
| Cow position: | chr3:21181371-21181483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 158-272 | 
| Cow position: | chr3:31416342-31416230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 158-272 | 
| Cow position: | chr3:40824714-40824603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 158-272 | 
| Cow position: | chr3:42448438-42448327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 158-272 | 
| Cow position: | chr3:48229153-48229266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 7e-27 | 
| Alignm gaps (pig, cow): | 31, 26 | 
| Conread position: | 158-273 | 
| Cow position: | chr3:6876852-6876965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 158-275 | 
| Cow position: | chr3:19940217-19940103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 26, 0 | 
| Conread position: | 160-268 | 
| Cow position: | chr3:56146623-56146517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 160-268 | 
| Cow position: | chr3:72671208-72671314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 24, 0 | 
Show alignments to all cow chromosomes.
