Cow genome map
| Conread name: | ruio15_e14.y1 |
| Conread position: | 8-539 |
| Cow position: | chr1:15491058-15491616 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 371 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 109, 55 |
| Conread position: | 8-580 |
| Cow position: | chr1:80713378-80713967 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 54 |
| Conread position: | 9-373 |
| Cow position: | chr1:25265416-25265034 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 9-373 |
| Cow position: | chr1:25270466-25270084 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 33 |
| Conread position: | 9-461 |
| Cow position: | chr1:73913747-73914181 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 9-566 |
| Cow position: | chr1:20418490-20417916 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 26 |
| Conread position: | 9-580 |
| Cow position: | chr1:71598834-71599408 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 41 |
| Conread position: | 9-580 |
| Cow position: | chr1:73244979-73244395 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 25 |
| Conread position: | 10-438 |
| Cow position: | chr1:3426080-3425652 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 146, 56 |
| Conread position: | 12-471 |
| Cow position: | chr1:11674431-11674905 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 313 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 120, 49 |
| Conread position: | 14-510 |
| Cow position: | chr1:33518501-33519012 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 338 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 79, 129 |
| Conread position: | 44-423 |
| Cow position: | chr1:51042988-51042611 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 39, 14 |
| Conread position: | 68-417 |
| Cow position: | chr1:12448460-12448816 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 24 |
| Conread position: | 89-462 |
| Cow position: | chr1:15392823-15393211 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 124-572 |
| Cow position: | chr1:61352638-61352173 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 319 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 148-580 |
| Cow position: | chr1:36529524-36529088 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 295 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 73, 57 |
| Conread position: | 187-389 |
| Cow position: | chr1:7046674-7046876 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 189-573 |
| Cow position: | chr1:22936124-22935722 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 189-579 |
| Cow position: | chr1:66711682-66712085 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 25 |
| Conread position: | 194-383 |
| Cow position: | chr1:56024068-56023876 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 194-462 |
| Cow position: | chr1:58096880-58097138 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 198-571 |
| Cow position: | chr1:53249512-53249894 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 98 |
| Conread position: | 218-446 |
| Cow position: | chr1:55434325-55434556 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 182 |
| Conread position: | 223-577 |
| Cow position: | chr1:21709730-21710107 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 61, 187 |
| Conread position: | 279-457 |
| Cow position: | chr1:217201-217377 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 120, 0 |
Show alignments to all cow chromosomes.