Cow genome map


           Conread name:
           ruio15_e14.y1
        

               Conread position:
               9-266
               

               Cow position:
               chr10:51308414-51308666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               143, 128
               

               Conread position:
               9-347
               

               Cow position:
               chr10:10247651-10247998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               134, 112
               

               Conread position:
               9-462
               

               Cow position:
               chr10:35553610-35553167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               314
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               9-572
               

               Cow position:
               chr10:50148391-50148984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               600
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 25
               

               Conread position:
               11-574
               

               Cow position:
               chr10:25266160-25265601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               11-580
               

               Cow position:
               chr10:9100215-9100798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               599
               

               Alignm identity:
               389
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               100, 21
               

               Conread position:
               69-580
               

               Cow position:
               chr10:19739310-19738804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 69
               

               Conread position:
               114-577
               

               Cow position:
               chr10:37648-38118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               35, 23
               

               Conread position:
               189-580
               

               Cow position:
               chr10:56988184-56987780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 31
               
Show alignments to all cow chromosomes.