Cow genome map


           Conread name:
           ruio15_e14.y1
        

               Conread position:
               8-396
               

               Cow position:
               chr9:13531429-13531022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               55, 134
               

               Conread position:
               8-580
               

               Cow position:
               chr9:20793090-20793683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               602
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 187
               

               Conread position:
               9-343
               

               Cow position:
               chr9:17798126-17798468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               168, 59
               

               Conread position:
               9-462
               

               Cow position:
               chr9:45849927-45849473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 57
               

               Conread position:
               9-467
               

               Cow position:
               chr9:22971230-22970770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               313
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               9-577
               

               Cow position:
               chr9:52948965-52948363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 133
               

               Conread position:
               17-543
               

               Cow position:
               chr9:3596638-3597185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               563
               

               Alignm identity:
               370
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               6, 49
               

               Conread position:
               92-580
               

               Cow position:
               chr9:11804856-11805341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               502
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               
Show alignments to all cow chromosomes.