Non-Coding RNA Search

Cow genome map


           Conread name:
           ruio19_k16.y1
        

               Conread position:
               1-315
               

               Cow position:
               chr1:72284782-72285114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 45
               

               Conread position:
               1-322
               

               Cow position:
               chr1:40700627-40700307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 16
               

               Conread position:
               1-342
               

               Cow position:
               chr1:60410737-60410388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 58
               

               Conread position:
               1-345
               

               Cow position:
               chr1:23370790-23371138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 252
               

               Conread position:
               1-345
               

               Cow position:
               chr1:72035676-72036020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 93
               

               Conread position:
               1-345
               

               Cow position:
               chr1:102010505-102010856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               1-346
               

               Cow position:
               chr1:72306584-72306930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 228
               

               Conread position:
               1-349
               

               Cow position:
               chr1:2599931-2600281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               1-351
               

               Cow position:
               chr1:40603799-40603444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 204
               

               Conread position:
               1-351
               

               Cow position:
               chr1:95655176-95655519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 35
               

               Conread position:
               1-352
               

               Cow position:
               chr1:81356520-81356879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 327
               

               Conread position:
               1-365
               

               Cow position:
               chr1:10034299-10033927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 325
               

               Conread position:
               1-366
               

               Cow position:
               chr1:88297983-88297619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 234
               

               Conread position:
               1-370
               

               Cow position:
               chr1:27495011-27494636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 221
               

               Conread position:
               1-381
               

               Cow position:
               chr1:42887732-42888111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 216
               

               Conread position:
               1-381
               

               Cow position:
               chr1:85773978-85773589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 80
               

               Conread position:
               1-382
               

               Cow position:
               chr1:67013770-67013396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               58, 96
               

               Conread position:
               1-383
               

               Cow position:
               chr1:30785769-30786144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               1-383
               

               Cow position:
               chr1:35785551-35785157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               1-383
               

               Cow position:
               chr1:81925421-81925794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               1-383
               

               Cow position:
               chr1:96193386-96193775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 69
               

               Conread position:
               1-388
               

               Cow position:
               chr1:87831015-87830627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 195
               

               Conread position:
               1-392
               

               Cow position:
               chr1:23578054-23578432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               1-392
               

               Cow position:
               chr1:29606273-29606675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               1-392
               

               Cow position:
               chr1:31316711-31317100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               55, 93
               

               Conread position:
               1-392
               

               Cow position:
               chr1:59248022-59248394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               1-392
               

               Cow position:
               chr1:72803742-72804141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 336
               

               Conread position:
               1-394
               

               Cow position:
               chr1:42554769-42554375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 100
               

               Conread position:
               1-395
               

               Cow position:
               chr1:28176532-28176122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 89
               

               Conread position:
               1-395
               

               Cow position:
               chr1:67290386-67289990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 156
               

               Conread position:
               1-397
               

               Cow position:
               chr1:4452313-4452717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 202
               

               Conread position:
               1-397
               

               Cow position:
               chr1:16116625-16117031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 236
               

               Conread position:
               1-397
               

               Cow position:
               chr1:31238410-31238821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 338
               

               Conread position:
               1-397
               

               Cow position:
               chr1:52054598-52054188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 337
               

               Conread position:
               1-397
               

               Cow position:
               chr1:57120060-57120471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 182
               

               Conread position:
               1-397
               

               Cow position:
               chr1:97075729-97076133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 175
               

               Conread position:
               1-397
               

               Cow position:
               chr1:102321351-102321749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 126
               

               Conread position:
               1-398
               

               Cow position:
               chr1:6165751-6165344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               1-398
               

               Cow position:
               chr1:74302349-74302745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 43
               

               Conread position:
               1-398
               

               Cow position:
               chr1:101834147-101833767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 62
               

               Conread position:
               1-399
               

               Cow position:
               chr1:14528694-14529098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 104
               

               Conread position:
               1-399
               

               Cow position:
               chr1:20866823-20867242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 143
               

               Conread position:
               1-399
               

               Cow position:
               chr1:22790170-22789770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 131
               

               Conread position:
               1-399
               

               Cow position:
               chr1:23117436-23117842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 92
               

               Conread position:
               1-399
               

               Cow position:
               chr1:30495328-30494930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 244
               

               Conread position:
               1-399
               

               Cow position:
               chr1:41736100-41736509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 61
               

               Conread position:
               1-399
               

               Cow position:
               chr1:54117000-54116610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 35
               

               Conread position:
               1-399
               

               Cow position:
               chr1:61221192-61220795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 93
               

               Conread position:
               1-399
               

               Cow position:
               chr1:66684792-66685168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               23, 32
               

               Conread position:
               1-399
               

               Cow position:
               chr1:68282310-68281915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               1-399
               

               Cow position:
               chr1:71691327-71690921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 266
               

               Conread position:
               1-399
               

               Cow position:
               chr1:76699968-76700378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 50
               

               Conread position:
               1-399
               

               Cow position:
               chr1:82370182-82369783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               289
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               38, 108
               

               Conread position:
               1-399
               

               Cow position:
               chr1:95474136-95474536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 266
               

               Conread position:
               1-399
               

               Cow position:
               chr1:100887733-100888142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 65
               

               Conread position:
               1-400
               

               Cow position:
               chr1:3263760-3263354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 195
               

               Conread position:
               1-400
               

               Cow position:
               chr1:4337531-4337131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 266
               

               Conread position:
               1-400
               

               Cow position:
               chr1:18196369-18195960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 333
               

               Conread position:
               1-400
               

               Cow position:
               chr1:29429378-29428964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 333
               

               Conread position:
               1-400
               

               Cow position:
               chr1:52354900-52355307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 169
               

               Conread position:
               1-400
               

               Cow position:
               chr1:56190645-56191054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 333
               

               Conread position:
               1-400
               

               Cow position:
               chr1:77461904-77461503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 244
               

               Conread position:
               1-401
               

               Cow position:
               chr1:3340435-3340032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 149
               

               Conread position:
               1-401
               

               Cow position:
               chr1:3930567-3930976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 40
               

               Conread position:
               1-401
               

               Cow position:
               chr1:4226756-4226361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 22
               

               Conread position:
               1-401
               

               Cow position:
               chr1:5505712-5505302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 333
               

               Conread position:
               1-401
               

               Cow position:
               chr1:7630712-7630312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 26
               

               Conread position:
               1-401
               

               Cow position:
               chr1:7746712-7746297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 187
               

               Conread position:
               1-401
               

               Cow position:
               chr1:8602204-8602612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               1-401
               

               Cow position:
               chr1:11198842-11199267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 348
               

               Conread position:
               1-401
               

               Cow position:
               chr1:11854177-11854586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 177
               

               Conread position:
               1-401
               

               Cow position:
               chr1:12057480-12057885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 175
               

               Conread position:
               1-401
               

               Cow position:
               chr1:13250774-13251181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               1-401
               

               Cow position:
               chr1:14240294-14240703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               1-401
               

               Cow position:
               chr1:16839091-16838681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 172
               

               Conread position:
               1-401
               

               Cow position:
               chr1:16973341-16973748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               1-401
               

               Cow position:
               chr1:17937979-17938390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 334
               

               Conread position:
               1-401
               

               Cow position:
               chr1:20098860-20098465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 185
               

               Conread position:
               1-401
               

               Cow position:
               chr1:20377832-20378230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 83
               

               Conread position:
               1-401
               

               Cow position:
               chr1:20543996-20543591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               1-401
               

               Cow position:
               chr1:20798595-20798183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 200
               

               Conread position:
               1-401
               

               Cow position:
               chr1:21376789-21377194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 185
               

               Conread position:
               1-401
               

               Cow position:
               chr1:21577326-21576906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 173
               

               Conread position:
               1-401
               

               Cow position:
               chr1:22012191-22012597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 331
               

               Conread position:
               1-401
               

               Cow position:
               chr1:23099400-23099000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 162
               

               Conread position:
               1-401
               

               Cow position:
               chr1:24440287-24440697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 334
               

               Conread position:
               1-401
               

               Cow position:
               chr1:24571367-24571777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 30
               

               Conread position:
               1-401
               

               Cow position:
               chr1:24581154-24580770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 45
               

               Conread position:
               1-401
               

               Cow position:
               chr1:25553576-25553168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 154
               

               Conread position:
               1-401
               

               Cow position:
               chr1:26811301-26811710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 235
               

               Conread position:
               1-401
               

               Cow position:
               chr1:28677819-28677419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 221
               

               Conread position:
               1-401
               

               Cow position:
               chr1:28876869-28876461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 331
               

               Conread position:
               1-401
               

               Cow position:
               chr1:30372665-30372257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 174
               

               Conread position:
               1-401
               

               Cow position:
               chr1:30531260-30531659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               1-401
               

               Cow position:
               chr1:32562765-32563171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 239
               

               Conread position:
               1-401
               

               Cow position:
               chr1:33392789-33392382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 188
               

               Conread position:
               1-401
               

               Cow position:
               chr1:33716734-33716324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               1-401
               

               Cow position:
               chr1:38712487-38712076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 328
               

               Conread position:
               1-401
               

               Cow position:
               chr1:39479709-39480127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 341
               

               Conread position:
               1-401
               

               Cow position:
               chr1:40061958-40061586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 57
               

               Conread position:
               1-401
               

               Cow position:
               chr1:40089140-40088739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 216
               

               Conread position:
               1-401
               

               Cow position:
               chr1:47454208-47454616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 234
               

               Conread position:
               1-401
               

               Cow position:
               chr1:50764906-50764510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 159
               

               Conread position:
               1-401
               

               Cow position:
               chr1:51980739-51980343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 14
               

               Conread position:
               1-401
               

               Cow position:
               chr1:52434796-52434390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 126
               

               Conread position:
               1-401
               

               Cow position:
               chr1:52507848-52508257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 327
               

               Conread position:
               1-401
               

               Cow position:
               chr1:52863521-52863925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 233
               

               Conread position:
               1-401
               

               Cow position:
               chr1:53308884-53309295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 339
               

               Conread position:
               1-401
               

               Cow position:
               chr1:53520420-53520026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 140
               

               Conread position:
               1-401
               

               Cow position:
               chr1:53578826-53578420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 329
               

               Conread position:
               1-401
               

               Cow position:
               chr1:55158608-55159019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 334
               

               Conread position:
               1-401
               

               Cow position:
               chr1:55203129-55203546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 13
               

               Conread position:
               1-401
               

               Cow position:
               chr1:55327470-55327873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 267
               

               Conread position:
               1-401
               

               Cow position:
               chr1:55780642-55780235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 332
               

               Conread position:
               1-401
               

               Cow position:
               chr1:56425686-56425274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 335
               

               Conread position:
               1-401
               

               Cow position:
               chr1:56619172-56619583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 244
               

               Conread position:
               1-401
               

               Cow position:
               chr1:56857591-56857197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               94, 65
               

               Conread position:
               1-401
               

               Cow position:
               chr1:57362559-57362969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 334
               

               Conread position:
               1-401
               

               Cow position:
               chr1:57396568-57396954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 185
               

               Conread position:
               1-401
               

               Cow position:
               chr1:57571606-57571196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 333
               

               Conread position:
               1-401
               

               Cow position:
               chr1:57573823-57574223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 160
               

               Conread position:
               1-401
               

               Cow position:
               chr1:57636386-57635975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 334
               

               Conread position:
               1-401
               

               Cow position:
               chr1:57660372-57659964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 141
               

               Conread position:
               1-401
               

               Cow position:
               chr1:57678610-57679015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               1-401
               

               Cow position:
               chr1:58192032-58192442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 333
               

               Conread position:
               1-401
               

               Cow position:
               chr1:58196680-58197090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 8
               

               Conread position:
               1-401
               

               Cow position:
               chr1:58340688-58340278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 236
               

               Conread position:
               1-401
               

               Cow position:
               chr1:58439523-58439935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 136
               

               Conread position:
               1-401
               

               Cow position:
               chr1:61283193-61282787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 235
               

               Conread position:
               1-401
               

               Cow position:
               chr1:63049339-63048942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 149
               

               Conread position:
               1-401
               

               Cow position:
               chr1:63240478-63240056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 265
               

               Conread position:
               1-401
               

               Cow position:
               chr1:64717122-64717528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               1-401
               

               Cow position:
               chr1:65390335-65389921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 337
               

               Conread position:
               1-401
               

               Cow position:
               chr1:66242292-66242697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               1-401
               

               Cow position:
               chr1:66491351-66490945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 252
               

               Conread position:
               1-401
               

               Cow position:
               chr1:66971398-66971795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 191
               

               Conread position:
               1-401
               

               Cow position:
               chr1:67078053-67078463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 327
               

               Conread position:
               1-401
               

               Cow position:
               chr1:68253104-68252693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               1-401
               

               Cow position:
               chr1:68601856-68602266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 333
               

               Conread position:
               1-401
               

               Cow position:
               chr1:69406936-69406522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 337
               

               Conread position:
               1-401
               

               Cow position:
               chr1:70865017-70864611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 244
               

               Conread position:
               1-401
               

               Cow position:
               chr1:71081075-71081479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 239
               

               Conread position:
               1-401
               

               Cow position:
               chr1:71135659-71135264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 74
               

               Conread position:
               1-401
               

               Cow position:
               chr1:72087357-72086963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               1-401
               

               Cow position:
               chr1:72114909-72114504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 251
               

               Conread position:
               1-401
               

               Cow position:
               chr1:72766262-72766673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 329
               

               Conread position:
               1-401
               

               Cow position:
               chr1:72812929-72812524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 233
               

               Conread position:
               1-401
               

               Cow position:
               chr1:72987229-72986822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 235
               

               Conread position:
               1-401
               

               Cow position:
               chr1:73017704-73018106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 61
               

               Conread position:
               1-401
               

               Cow position:
               chr1:73761777-73762181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 92
               

               Conread position:
               1-401
               

               Cow position:
               chr1:76617715-76618111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               244, 61
               

               Conread position:
               1-401
               

               Cow position:
               chr1:76748621-76749028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 241
               

               Conread position:
               1-401
               

               Cow position:
               chr1:77657309-77656907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 118
               

               Conread position:
               1-401
               

               Cow position:
               chr1:79255766-79255350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 203
               

               Conread position:
               1-401
               

               Cow position:
               chr1:79334212-79334623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               1-401
               

               Cow position:
               chr1:79632781-79633188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 236
               

               Conread position:
               1-401
               

               Cow position:
               chr1:82091668-82091258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 156
               

               Conread position:
               1-401
               

               Cow position:
               chr1:82920367-82920778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 334
               

               Conread position:
               1-401
               

               Cow position:
               chr1:85776688-85777095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 309
               

               Conread position:
               1-401
               

               Cow position:
               chr1:86599237-86599648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 333
               

               Conread position:
               1-401
               

               Cow position:
               chr1:88028585-88028186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               1-401
               

               Cow position:
               chr1:88179632-88179223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 332
               

               Conread position:
               1-401
               

               Cow position:
               chr1:89185691-89186101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 255
               

               Conread position:
               1-401
               

               Cow position:
               chr1:89484873-89484457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 311
               

               Conread position:
               1-401
               

               Cow position:
               chr1:89766769-89767167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 68
               

               Conread position:
               1-401
               

               Cow position:
               chr1:92196747-92196340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 235
               

               Conread position:
               1-401
               

               Cow position:
               chr1:93858286-93857886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 94
               

               Conread position:
               1-401
               

               Cow position:
               chr1:94663427-94663017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 327
               

               Conread position:
               1-401
               

               Cow position:
               chr1:98618435-98618029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 22
               

               Conread position:
               1-401
               

               Cow position:
               chr1:99571821-99572202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 127
               

               Conread position:
               1-401
               

               Cow position:
               chr1:99628310-99628713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               1-401
               

               Cow position:
               chr1:100591000-100591409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 148
               

               Conread position:
               2-314
               

               Cow position:
               chr1:86372265-86372587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               2-321
               

               Cow position:
               chr1:61281783-61281455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               2-325
               

               Cow position:
               chr1:99438678-99438994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               2-333
               

               Cow position:
               chr1:78558200-78557861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-340
               

               Cow position:
               chr1:40351628-40351282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-341
               

               Cow position:
               chr1:68480915-68481261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               2-345
               

               Cow position:
               chr1:3012046-3012394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 311
               

               Conread position:
               2-345
               

               Cow position:
               chr1:33040591-33040240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 326
               

               Conread position:
               2-345
               

               Cow position:
               chr1:52818558-52818208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 332
               

               Conread position:
               2-345
               

               Cow position:
               chr1:72806245-72806585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 174
               

               Conread position:
               2-345
               

               Cow position:
               chr1:97206128-97205776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 327
               

               Conread position:
               2-367
               

               Cow position:
               chr1:8744724-8745099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-367
               

               Cow position:
               chr1:9309263-9308888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-379
               

               Cow position:
               chr1:30312200-30311815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 324
               

               Conread position:
               2-383
               

               Cow position:
               chr1:1028140-1027756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 217
               

               Conread position:
               2-383
               

               Cow position:
               chr1:71123866-71124257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-394
               

               Cow position:
               chr1:87472938-87473348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               283
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               2-397
               

               Cow position:
               chr1:18699203-18698798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-397
               

               Cow position:
               chr1:67188652-67189061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 138
               

               Conread position:
               2-398
               

               Cow position:
               chr1:26446914-26446522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 60
               

               Conread position:
               2-399
               

               Cow position:
               chr1:9262269-9261862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-399
               

               Cow position:
               chr1:19235724-19236131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-399
               

               Cow position:
               chr1:39234734-39235137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 251
               

               Conread position:
               2-399
               

               Cow position:
               chr1:40680957-40681365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 333
               

               Conread position:
               2-399
               

               Cow position:
               chr1:68845943-68846348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 229
               

               Conread position:
               2-399
               

               Cow position:
               chr1:84894335-84893928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 180
               

               Conread position:
               2-399
               

               Cow position:
               chr1:85338624-85338227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 17
               

               Conread position:
               2-400
               

               Cow position:
               chr1:68854704-68854320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 44
               

               Conread position:
               2-400
               

               Cow position:
               chr1:80901722-80902112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 60
               

               Conread position:
               2-401
               

               Cow position:
               chr1:2990256-2989847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:3440735-3440327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:3931867-3932276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:7162046-7162444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 60
               

               Conread position:
               2-401
               

               Cow position:
               chr1:7197113-7196718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 157
               

               Conread position:
               2-401
               

               Cow position:
               chr1:7712546-7712144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 83
               

               Conread position:
               2-401
               

               Cow position:
               chr1:8470390-8470798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 234
               

               Conread position:
               2-401
               

               Cow position:
               chr1:8517298-8517706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               2-401
               

               Cow position:
               chr1:9376606-9377007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 331
               

               Conread position:
               2-401
               

               Cow position:
               chr1:10726396-10725988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:11873873-11874278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 312
               

               Conread position:
               2-401
               

               Cow position:
               chr1:12374531-12374940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:13404612-13405022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 318
               

               Conread position:
               2-401
               

               Cow position:
               chr1:15148871-15149279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 234
               

               Conread position:
               2-401
               

               Cow position:
               chr1:15743590-15743184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 194
               

               Conread position:
               2-401
               

               Cow position:
               chr1:17187467-17187876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:17247890-17248299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-401
               

               Cow position:
               chr1:17435629-17436037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 324
               

               Conread position:
               2-401
               

               Cow position:
               chr1:19056641-19056237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 267
               

               Conread position:
               2-401
               

               Cow position:
               chr1:19157684-19158093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:19828222-19828615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 184
               

               Conread position:
               2-401
               

               Cow position:
               chr1:20527932-20527524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               2-401
               

               Cow position:
               chr1:20832654-20832246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 122
               

               Conread position:
               2-401
               

               Cow position:
               chr1:20846240-20846649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:20848758-20849167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:21079667-21080076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:21257839-21258238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               2-401
               

               Cow position:
               chr1:22253831-22253439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               2-401
               

               Cow position:
               chr1:26536413-26536822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:26588721-26588314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 330
               

               Conread position:
               2-401
               

               Cow position:
               chr1:28811469-28811878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:29038313-29037904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 136
               

               Conread position:
               2-401
               

               Cow position:
               chr1:30281053-30281460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 153
               

               Conread position:
               2-401
               

               Cow position:
               chr1:31350998-31351405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 174
               

               Conread position:
               2-401
               

               Cow position:
               chr1:31535624-31535216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 153
               

               Conread position:
               2-401
               

               Cow position:
               chr1:31645856-31646260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 238
               

               Conread position:
               2-401
               

               Cow position:
               chr1:33855039-33854631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 234
               

               Conread position:
               2-401
               

               Cow position:
               chr1:34534014-34533605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-401
               

               Cow position:
               chr1:36645679-36646087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 270
               

               Conread position:
               2-401
               

               Cow position:
               chr1:38418586-38418185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               2-401
               

               Cow position:
               chr1:39112478-39112073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 166
               

               Conread position:
               2-401
               

               Cow position:
               chr1:40058866-40058469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 335
               

               Conread position:
               2-401
               

               Cow position:
               chr1:46612524-46612933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:47078409-47078816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 117
               

               Conread position:
               2-401
               

               Cow position:
               chr1:48345941-48345534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 174
               

               Conread position:
               2-401
               

               Cow position:
               chr1:49268653-49268248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:51884374-51883973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 295
               

               Conread position:
               2-401
               

               Cow position:
               chr1:52381217-52380808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:53650419-53650016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 57
               

               Conread position:
               2-401
               

               Cow position:
               chr1:54471641-54472050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:54933700-54933292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 331
               

               Conread position:
               2-401
               

               Cow position:
               chr1:55273271-55273678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 330
               

               Conread position:
               2-401
               

               Cow position:
               chr1:56205041-56205446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 287
               

               Conread position:
               2-401
               

               Cow position:
               chr1:56666873-56666464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:59483094-59483499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 172
               

               Conread position:
               2-401
               

               Cow position:
               chr1:62507472-62507878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 323
               

               Conread position:
               2-401
               

               Cow position:
               chr1:63046654-63046249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 172
               

               Conread position:
               2-401
               

               Cow position:
               chr1:63340700-63341108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 122
               

               Conread position:
               2-401
               

               Cow position:
               chr1:66145473-66145064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:66368620-66369029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:67006646-67006242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 30
               

               Conread position:
               2-401
               

               Cow position:
               chr1:67831361-67831772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 328
               

               Conread position:
               2-401
               

               Cow position:
               chr1:68145198-68145607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:69503601-69504010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:69770588-69770183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 87
               

               Conread position:
               2-401
               

               Cow position:
               chr1:70068638-70069047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:71558977-71559386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:71795305-71794897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 165
               

               Conread position:
               2-401
               

               Cow position:
               chr1:72589591-72590000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:72624623-72624212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 300
               

               Conread position:
               2-401
               

               Cow position:
               chr1:73463738-73463328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 19
               

               Conread position:
               2-401
               

               Cow position:
               chr1:74513370-74513779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:75403667-75403258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:76873650-76873246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 234
               

               Conread position:
               2-401
               

               Cow position:
               chr1:76878803-76878396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 164
               

               Conread position:
               2-401
               

               Cow position:
               chr1:77748515-77748107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 122
               

               Conread position:
               2-401
               

               Cow position:
               chr1:77925254-77924845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-401
               

               Cow position:
               chr1:78921236-78921649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 336
               

               Conread position:
               2-401
               

               Cow position:
               chr1:79554267-79553857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               2-401
               

               Cow position:
               chr1:80564304-80564713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:81309134-81308725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:81343292-81342898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 39
               

               Conread position:
               2-401
               

               Cow position:
               chr1:82479756-82479347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:82568181-82567776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 208
               

               Conread position:
               2-401
               

               Cow position:
               chr1:82909054-82909468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 24
               

               Conread position:
               2-401
               

               Cow position:
               chr1:83059869-83060277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 326
               

               Conread position:
               2-401
               

               Cow position:
               chr1:83136707-83136306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               2-401
               

               Cow position:
               chr1:83170214-83169806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               2-401
               

               Cow position:
               chr1:85795720-85795310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 302
               

               Conread position:
               2-401
               

               Cow position:
               chr1:86497062-86496653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:86544370-86544774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 138
               

               Conread position:
               2-401
               

               Cow position:
               chr1:88327711-88328123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               2-401
               

               Cow position:
               chr1:89089764-89090173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:89234260-89234668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 331
               

               Conread position:
               2-401
               

               Cow position:
               chr1:89432176-89431767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:90392986-90393393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 117
               

               Conread position:
               2-401
               

               Cow position:
               chr1:91105811-91105406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:91902792-91902383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 335
               

               Conread position:
               2-401
               

               Cow position:
               chr1:95457124-95456716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 324
               

               Conread position:
               2-401
               

               Cow position:
               chr1:98353622-98354031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               2-401
               

               Cow position:
               chr1:98559685-98559277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 142
               

               Conread position:
               2-401
               

               Cow position:
               chr1:98988654-98989063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 326
               

               Conread position:
               2-401
               

               Cow position:
               chr1:99117783-99117382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 78
               

               Conread position:
               2-401
               

               Cow position:
               chr1:100421357-100420962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 185
               

               Conread position:
               2-401
               

               Cow position:
               chr1:102815245-102814837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               2-402
               

               Cow position:
               chr1:72808352-72807942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 332
               

               Conread position:
               3-326
               

               Cow position:
               chr1:19517661-19517998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               3-389
               

               Cow position:
               chr1:72997740-72997347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 91
               

               Conread position:
               3-399
               

               Cow position:
               chr1:42053812-42054209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 206
               

               Conread position:
               3-401
               

               Cow position:
               chr1:4514964-4515360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 121
               

               Conread position:
               3-401
               

               Cow position:
               chr1:4645786-4646170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 112
               

               Conread position:
               3-401
               

               Cow position:
               chr1:7416250-7415849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 64
               

               Conread position:
               3-401
               

               Cow position:
               chr1:18024048-18024456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 334
               

               Conread position:
               3-401
               

               Cow position:
               chr1:57759681-57759277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 294
               

               Conread position:
               3-401
               

               Cow position:
               chr1:63602016-63602424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 334
               

               Conread position:
               3-401
               

               Cow position:
               chr1:68610006-68610411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 331
               

               Conread position:
               3-401
               

               Cow position:
               chr1:68951154-68950771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               3-401
               

               Cow position:
               chr1:78291329-78290921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 325
               

               Conread position:
               3-401
               

               Cow position:
               chr1:95765621-95766016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 58
               

               Conread position:
               3-401
               

               Cow position:
               chr1:99837575-99837987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 335
               

               Conread position:
               4-401
               

               Cow position:
               chr1:11665770-11666177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 330
               

               Conread position:
               4-401
               

               Cow position:
               chr1:33547629-33548037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 331
               

               Conread position:
               4-401
               

               Cow position:
               chr1:35598040-35598447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 330
               

               Conread position:
               4-401
               

               Cow position:
               chr1:46930183-46930590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 330
               

               Conread position:
               4-401
               

               Cow position:
               chr1:84447452-84447046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 120
               

               Conread position:
               5-366
               

               Cow position:
               chr1:96298509-96298870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 229
               

               Conread position:
               5-385
               

               Cow position:
               chr1:95018298-95018688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 102
               

               Conread position:
               5-390
               

               Cow position:
               chr1:1743793-1744182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               275
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               54, 31
               

               Conread position:
               5-401
               

               Cow position:
               chr1:61331193-61331599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 329
               

               Conread position:
               5-401
               

               Cow position:
               chr1:90913597-90913193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               5-401
               

               Cow position:
               chr1:102552753-102552367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 214
               

               Conread position:
               6-401
               

               Cow position:
               chr1:51445026-51444608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 335
               

               Conread position:
               8-382
               

               Cow position:
               chr1:44836750-44837135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 321
               

               Conread position:
               8-401
               

               Cow position:
               chr1:71792701-71792293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 331
               

               Conread position:
               9-383
               

               Cow position:
               chr1:58195334-58195706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               10-401
               

               Cow position:
               chr1:20001244-20001636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               10-401
               

               Cow position:
               chr1:88530228-88530610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               52, 184
               

               Conread position:
               11-401
               

               Cow position:
               chr1:60280290-60279896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 25
               

               Conread position:
               12-399
               

               Cow position:
               chr1:61746418-61746816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 200
               

               Conread position:
               13-401
               

               Cow position:
               chr1:38544955-38545352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 8
               

               Conread position:
               15-383
               

               Cow position:
               chr1:69200881-69201258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               60, 143
               

               Conread position:
               15-398
               

               Cow position:
               chr1:29462072-29461694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               17-401
               

               Cow position:
               chr1:18282731-18282338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 81
               

               Conread position:
               17-401
               

               Cow position:
               chr1:102784280-102783901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               23-366
               

               Cow position:
               chr1:51393920-51393570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 185
               

               Conread position:
               23-392
               

               Cow position:
               chr1:68812189-68812553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 97
               

               Conread position:
               23-399
               

               Cow position:
               chr1:17008982-17009366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 309
               

               Conread position:
               23-401
               

               Cow position:
               chr1:85806880-85807251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 236
               

               Conread position:
               26-399
               

               Cow position:
               chr1:58419411-58419037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 114
               

               Conread position:
               26-401
               

               Cow position:
               chr1:13438844-13438483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               26-401
               

               Cow position:
               chr1:31414482-31414863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               125, 11
               

               Conread position:
               26-401
               

               Cow position:
               chr1:86705884-86705502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               27-392
               

               Cow position:
               chr1:70064845-70064486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               263
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               29, 210
               

               Conread position:
               27-401
               

               Cow position:
               chr1:19440798-19441176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               27-401
               

               Cow position:
               chr1:19483505-19483882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 181
               

               Conread position:
               27-401
               

               Cow position:
               chr1:26838689-26838319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 80
               

               Conread position:
               27-401
               

               Cow position:
               chr1:42057332-42056956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 146
               

               Conread position:
               28-399
               

               Cow position:
               chr1:31515396-31515748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 128
               

               Conread position:
               28-401
               

               Cow position:
               chr1:44078676-44079056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 207
               

               Conread position:
               29-401
               

               Cow position:
               chr1:5013052-5013433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 293
               

               Conread position:
               32-401
               

               Cow position:
               chr1:56170701-56170323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 295
               

               Conread position:
               35-401
               

               Cow position:
               chr1:51967982-51967613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 221
               

               Conread position:
               37-399
               

               Cow position:
               chr1:88563180-88563548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 177
               

               Conread position:
               37-401
               

               Cow position:
               chr1:73564740-73565114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 291
               

               Conread position:
               39-389
               

               Cow position:
               chr1:10005262-10005613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               40-400
               

               Cow position:
               chr1:81320592-81320962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 271
               

               Conread position:
               46-392
               

               Cow position:
               chr1:38479336-38478984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 13
               

               Conread position:
               47-401
               

               Cow position:
               chr1:69670894-69671257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 120
               

               Conread position:
               48-401
               

               Cow position:
               chr1:61097227-61096864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 280
               

               Conread position:
               48-401
               

               Cow position:
               chr1:99674609-99674972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 286
               

               Conread position:
               55-401
               

               Cow position:
               chr1:25087962-25088306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 178
               

               Conread position:
               56-383
               

               Cow position:
               chr1:34857986-34858309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 15
               

               Conread position:
               56-387
               

               Cow position:
               chr1:4375088-4375416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 42
               

               Conread position:
               56-399
               

               Cow position:
               chr1:101787239-101787574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               56-401
               

               Cow position:
               chr1:31351923-31352263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 15
               

               Conread position:
               57-399
               

               Cow position:
               chr1:22729874-22730206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               57-401
               

               Cow position:
               chr1:22480950-22481294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 144
               

               Conread position:
               57-401
               

               Cow position:
               chr1:71666759-71667116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 118
               

               Conread position:
               59-393
               

               Cow position:
               chr1:71045217-71044874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 276
               

               Conread position:
               59-394
               

               Cow position:
               chr1:27545268-27544925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               59-401
               

               Cow position:
               chr1:9595232-9595582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 155
               

               Conread position:
               59-401
               

               Cow position:
               chr1:23057986-23057640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               45, 116
               

               Conread position:
               59-401
               

               Cow position:
               chr1:45006653-45006323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 12
               

               Conread position:
               60-365
               

               Cow position:
               chr1:33364723-33364411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 265
               

               Conread position:
               60-365
               

               Cow position:
               chr1:33656556-33656244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 265
               

               Conread position:
               60-401
               

               Cow position:
               chr1:21352614-21352953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               245
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               44, 84
               

               Conread position:
               61-345
               

               Cow position:
               chr1:60554624-60554914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               65-396
               

               Cow position:
               chr1:39889783-39889447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 118
               

               Conread position:
               65-401
               

               Cow position:
               chr1:23861002-23861345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 266
               

               Conread position:
               67-345
               

               Cow position:
               chr1:10936988-10936705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 258
               

               Conread position:
               67-392
               

               Cow position:
               chr1:99865622-99865290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               25, 64
               

               Conread position:
               67-399
               

               Cow position:
               chr1:61342007-61342340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 106
               

               Conread position:
               68-401
               

               Cow position:
               chr1:100536860-100536512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               71-399
               

               Cow position:
               chr1:51313089-51313413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 155
               

               Conread position:
               71-399
               

               Cow position:
               chr1:61747758-61748085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 78
               

               Conread position:
               81-401
               

               Cow position:
               chr1:7837066-7837397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 223
               

               Conread position:
               82-366
               

               Cow position:
               chr1:53780842-53780560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               82-383
               

               Cow position:
               chr1:48036120-48036428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 243
               

               Conread position:
               82-402
               

               Cow position:
               chr1:77103674-77103997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 254
               

               Conread position:
               83-352
               

               Cow position:
               chr1:21132175-21132441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               83-365
               

               Cow position:
               chr1:63044472-63044758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               83-401
               

               Cow position:
               chr1:53372053-53371730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               83-401
               

               Cow position:
               chr1:73433809-73434140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 254
               

               Conread position:
               83-401
               

               Cow position:
               chr1:99917128-99916803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 248
               

               Conread position:
               84-401
               

               Cow position:
               chr1:5162657-5162975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 158
               

               Conread position:
               84-401
               

               Cow position:
               chr1:42874977-42875292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               84-401
               

               Cow position:
               chr1:98789530-98789218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               85-401
               

               Cow position:
               chr1:40509559-40509894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 252
               

               Conread position:
               87-401
               

               Cow position:
               chr1:46821297-46820978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               87-401
               

               Cow position:
               chr1:89112500-89112186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 146
               

               Conread position:
               90-399
               

               Cow position:
               chr1:34392178-34392495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 235
               

               Conread position:
               91-401
               

               Cow position:
               chr1:15463530-15463216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               127, 96
               

               Conread position:
               94-392
               

               Cow position:
               chr1:39249761-39250065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 106
               

               Conread position:
               94-394
               

               Cow position:
               chr1:21113751-21114052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 29
               

               Conread position:
               97-318
               

               Cow position:
               chr1:60033245-60033466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               6, 151
               

               Conread position:
               102-401
               

               Cow position:
               chr1:13718171-13718473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 60
               

               Conread position:
               102-401
               

               Cow position:
               chr1:57506460-57506155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 228
               

               Conread position:
               103-358
               

               Cow position:
               chr1:86574493-86574234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 13
               

               Conread position:
               103-401
               

               Cow position:
               chr1:19884237-19884537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               153, 63
               

               Conread position:
               103-401
               

               Cow position:
               chr1:25052921-25053223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 84
               

               Conread position:
               104-401
               

               Cow position:
               chr1:4207832-4208135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 226
               

               Conread position:
               107-341
               

               Cow position:
               chr1:25548696-25548460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               148, 124
               

               Conread position:
               107-401
               

               Cow position:
               chr1:52371635-52371336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 18
               

               Conread position:
               108-397
               

               Cow position:
               chr1:12468137-12468426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               239, 6
               

               Conread position:
               111-401
               

               Cow position:
               chr1:79453103-79453396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 71
               

               Conread position:
               112-320
               

               Cow position:
               chr1:96390630-96390835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               137, 57
               

               Conread position:
               112-401
               

               Cow position:
               chr1:24655487-24655194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 143
               

               Conread position:
               112-401
               

               Cow position:
               chr1:32960840-32961139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               112-401
               

               Cow position:
               chr1:57946591-57946294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 121
               

               Conread position:
               113-399
               

               Cow position:
               chr1:57957910-57958194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               77, 30
               

               Conread position:
               113-401
               

               Cow position:
               chr1:21534603-21534898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               132, 211
               

               Conread position:
               115-401
               

               Cow position:
               chr1:24202494-24202783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               131, 22
               

               Conread position:
               117-319
               

               Cow position:
               chr1:85400467-85400672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               141, 61
               

               Conread position:
               122-379
               

               Cow position:
               chr1:69873121-69872858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               196
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               123, 202
               

               Conread position:
               122-383
               

               Cow position:
               chr1:6765453-6765721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 203
               

               Conread position:
               122-399
               

               Cow position:
               chr1:73968161-73967878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 202
               

               Conread position:
               122-401
               

               Cow position:
               chr1:8845305-8845020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 208
               

               Conread position:
               123-345
               

               Cow position:
               chr1:4563638-4563864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               132, 201
               

               Conread position:
               124-401
               

               Cow position:
               chr1:7406318-7406035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 206
               

               Conread position:
               128-401
               

               Cow position:
               chr1:21507448-21507724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 122
               

               Conread position:
               130-401
               

               Cow position:
               chr1:100451039-100451310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 7
               

               Conread position:
               135-401
               

               Cow position:
               chr1:31391665-31391931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 140
               

               Conread position:
               137-312
               

               Cow position:
               chr1:100435941-100435765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               132, 112
               

               Conread position:
               137-379
               

               Cow position:
               chr1:15049433-15049195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               132, 19
               

               Conread position:
               137-401
               

               Cow position:
               chr1:26722030-26722298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 193
               

               Conread position:
               137-401
               

               Cow position:
               chr1:30079574-30079305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               108, 58
               

               Conread position:
               137-401
               

               Cow position:
               chr1:42740330-42740060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 193
               

               Conread position:
               137-401
               

               Cow position:
               chr1:53397309-53397065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               137-401
               

               Cow position:
               chr1:56632004-56631743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               218, 116
               

               Conread position:
               137-401
               

               Cow position:
               chr1:56746518-56746248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 193
               

               Conread position:
               137-401
               

               Cow position:
               chr1:59202592-59202863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               118, 194
               

               Conread position:
               137-401
               

               Cow position:
               chr1:61204018-61203748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 154
               

               Conread position:
               137-401
               

               Cow position:
               chr1:62928103-62927833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 187
               

               Conread position:
               137-401
               

               Cow position:
               chr1:67913712-67913440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               92, 26
               

               Conread position:
               137-401
               

               Cow position:
               chr1:72139825-72139559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               137-401
               

               Cow position:
               chr1:73063708-73063974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               137-401
               

               Cow position:
               chr1:86505719-86505989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 188
               

               Conread position:
               137-401
               

               Cow position:
               chr1:101973777-101974044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               138-353
               

               Cow position:
               chr1:12677901-12677688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               133, 7
               

               Conread position:
               139-394
               

               Cow position:
               chr1:74939355-74939103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 122
               

               Conread position:
               139-401
               

               Cow position:
               chr1:9438669-9438927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               130, 41
               

               Conread position:
               139-401
               

               Cow position:
               chr1:76851652-76851910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               203, 56
               

               Conread position:
               142-400
               

               Cow position:
               chr1:19049639-19049900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               129, 186
               

               Conread position:
               143-366
               

               Cow position:
               chr1:42770777-42771002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               101, 181
               

               Conread position:
               143-401
               

               Cow position:
               chr1:60250798-60251062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 187
               

               Conread position:
               144-399
               

               Cow position:
               chr1:74886514-74886260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               144-401
               

               Cow position:
               chr1:52379922-52379657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 188
               

               Conread position:
               148-383
               

               Cow position:
               chr1:31498719-31498477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               97, 73
               

               Conread position:
               148-401
               

               Cow position:
               chr1:102431120-102431375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 101
               

               Conread position:
               149-382
               

               Cow position:
               chr1:79002500-79002743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 179
               

               Conread position:
               150-401
               

               Cow position:
               chr1:91889786-91890025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               105, 81
               

               Conread position:
               152-401
               

               Cow position:
               chr1:37323663-37323916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 180
               

               Conread position:
               153-389
               

               Cow position:
               chr1:69286794-69287036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               91, 10
               

               Conread position:
               154-345
               

               Cow position:
               chr1:9469633-9469438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               91, 170
               

               Conread position:
               158-401
               

               Cow position:
               chr1:93850914-93850665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               97, 172
               

               Conread position:
               161-401
               

               Cow position:
               chr1:44127243-44127477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               186, 89
               

               Conread position:
               168-401
               

               Cow position:
               chr1:31814633-31814379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               62, 183
               

               Conread position:
               171-377
               

               Cow position:
               chr1:99792024-99791805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               73, 163
               

               Conread position:
               173-344
               

               Cow position:
               chr1:11728332-11728162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               175-401
               

               Cow position:
               chr1:19793295-19793067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               175-401
               

               Cow position:
               chr1:32795797-32795565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               80, 155
               

               Conread position:
               176-401
               

               Cow position:
               chr1:53311834-53311593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               64, 163
               

               Conread position:
               176-401
               

               Cow position:
               chr1:85630931-85630700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               69, 154
               

               Conread position:
               180-400
               

               Cow position:
               chr1:24921923-24922144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 19
               

               Conread position:
               185-369
               

               Cow position:
               chr1:95994631-95994450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               162, 68
               

               Conread position:
               185-399
               

               Cow position:
               chr1:3382733-3382953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               185-401
               

               Cow position:
               chr1:10365152-10364930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               185-401
               

               Cow position:
               chr1:48810608-48810830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               70, 139
               

               Conread position:
               185-401
               

               Cow position:
               chr1:56475581-56475364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               61, 174
               

               Conread position:
               185-401
               

               Cow position:
               chr1:82163211-82163433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               185-401
               

               Cow position:
               chr1:92279238-92279447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               185-401
               

               Cow position:
               chr1:99105847-99106053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               169, 66
               

               Conread position:
               187-401
               

               Cow position:
               chr1:21678374-21678154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               192-400
               

               Cow position:
               chr1:55019242-55019034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               74, 57
               

               Conread position:
               193-401
               

               Cow position:
               chr1:70387751-70387963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 139
               

               Conread position:
               195-401
               

               Cow position:
               chr1:92920661-92920872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               204-401
               

               Cow position:
               chr1:61339753-61339956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               41, 126
               

               Conread position:
               205-401
               

               Cow position:
               chr1:89793519-89793317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               40, 125
               

               Conread position:
               207-400
               

               Cow position:
               chr1:31341848-31342043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               207-401
               

               Cow position:
               chr1:18087993-18087793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 123
               

               Conread position:
               211-400
               

               Cow position:
               chr1:43448951-43449145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               34, 111
               

               Conread position:
               211-401
               

               Cow position:
               chr1:28521211-28521015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               211-401
               

               Cow position:
               chr1:99119044-99118848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 119
               

               Conread position:
               218-401
               

               Cow position:
               chr1:40532337-40532516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               29, 47
               

               Conread position:
               220-399
               

               Cow position:
               chr1:78796524-78796707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               25, 108
               

               Conread position:
               220-401
               

               Cow position:
               chr1:19775541-19775727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               25, 109
               

               Conread position:
               220-401
               

               Cow position:
               chr1:73440517-73440330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               25, 110
               

               Conread position:
               223-401
               

               Cow position:
               chr1:88266582-88266763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               48, 13
               

               Conread position:
               223-402
               

               Cow position:
               chr1:61727541-61727721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               52, 120
               

               Conread position:
               225-383
               

               Cow position:
               chr1:30033812-30033648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 106
               

               Conread position:
               225-401
               

               Cow position:
               chr1:71939183-71939363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 97
               

               Conread position:
               226-401
               

               Cow position:
               chr1:22727844-22727665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 75
               

               Conread position:
               228-399
               

               Cow position:
               chr1:72864485-72864311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               232-401
               

               Cow position:
               chr1:99581917-99582093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               243-401
               

               Cow position:
               chr1:73010510-73010348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               254-401
               

               Cow position:
               chr1:80563419-80563270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               267-399
               

               Cow position:
               chr1:22529312-22529445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               80, 52
               

               Conread position:
               267-401
               

               Cow position:
               chr1:29656687-29656553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               86, 32
               

               Conread position:
               267-401
               

               Cow position:
               chr1:38279238-38279375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               267-401
               

               Cow position:
               chr1:79590350-79590215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               269-401
               

               Cow position:
               chr1:7324568-7324435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               81, 56
               

               Conread position:
               269-401
               

               Cow position:
               chr1:21165266-21165133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               269-401
               

               Cow position:
               chr1:52510621-52510754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               272-401
               

               Cow position:
               chr1:44137330-44137460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               75, 53
               

               Conread position:
               278-401
               

               Cow position:
               chr1:51982936-51982811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               402-492
               

               Cow position:
               chr1:53397542-53397633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               92
               

               Alignm identity:
               79
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-315
Cow position:	chr1:72284782-72285114 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	251
Alignm E-value:	0
Alignm gaps (pig, cow):	59, 45
Conread position:	1-322
Cow position:	chr1:40700627-40700307 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	236
Alignm E-value:	0
Alignm gaps (pig, cow):	90, 16
Conread position:	1-342
Cow position:	chr1:60410737-60410388 (view UCSC Genome Browser custom track)
Alignm length:	354
Alignm identity:	255
Alignm E-value:	0
Alignm gaps (pig, cow):	74, 58
Conread position:	1-345
Cow position:	chr1:23370790-23371138 (view UCSC Genome Browser custom track)
Alignm length:	352
Alignm identity:	274
Alignm E-value:	0
Alignm gaps (pig, cow):	56, 252
Conread position:	1-346
Cow position:	chr1:72306584-72306930 (view UCSC Genome Browser custom track)
Alignm length:	353
Alignm identity:	272
Alignm E-value:	0
Alignm gaps (pig, cow):	58, 228
Conread position:	1-349
Cow position:	chr1:2599931-2600281 (view UCSC Genome Browser custom track)
Alignm length:	356
Alignm identity:	246
Alignm E-value:	0
Alignm gaps (pig, cow):	58, 50
Conread position:	1-351
Cow position:	chr1:40603799-40603444 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	278
Alignm E-value:	0
Alignm gaps (pig, cow):	9, 204
Conread position:	1-352
Cow position:	chr1:81356520-81356879 (view UCSC Genome Browser custom track)
Alignm length:	361
Alignm identity:	284
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 327
Conread position:	1-365
Cow position:	chr1:10034299-10033927 (view UCSC Genome Browser custom track)
Alignm length:	374
Alignm identity:	276
Alignm E-value:	0
Alignm gaps (pig, cow):	56, 325
Conread position:	1-366
Cow position:	chr1:88297983-88297619 (view UCSC Genome Browser custom track)
Alignm length:	375
Alignm identity:	284
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 234
Conread position:	1-370
Cow position:	chr1:27495011-27494636 (view UCSC Genome Browser custom track)
Alignm length:	380
Alignm identity:	278
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 221
Conread position:	1-381
Cow position:	chr1:42887732-42888111 (view UCSC Genome Browser custom track)
Alignm length:	385
Alignm identity:	282
Alignm E-value:	0
Alignm gaps (pig, cow):	103, 216
Conread position:	1-382
Cow position:	chr1:67013770-67013396 (view UCSC Genome Browser custom track)
Alignm length:	387
Alignm identity:	263
Alignm E-value:	1.96182e-44
Alignm gaps (pig, cow):	58, 96
Conread position:	1-383
Cow position:	chr1:30785769-30786144 (view UCSC Genome Browser custom track)
Alignm length:	391
Alignm identity:	257
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	55, 114
Conread position:	1-388
Cow position:	chr1:87831015-87830627 (view UCSC Genome Browser custom track)
Alignm length:	396
Alignm identity:	283
Alignm E-value:	0
Alignm gaps (pig, cow):	55, 195
Conread position:	1-392
Cow position:	chr1:23578054-23578432 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	267
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	20, 53
Conread position:	1-394
Cow position:	chr1:42554769-42554375 (view UCSC Genome Browser custom track)
Alignm length:	402
Alignm identity:	297
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 100
Conread position:	1-395
Cow position:	chr1:28176532-28176122 (view UCSC Genome Browser custom track)
Alignm length:	416
Alignm identity:	303
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 89
Conread position:	1-397
Cow position:	chr1:4452313-4452717 (view UCSC Genome Browser custom track)
Alignm length:	410
Alignm identity:	299
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 202
Conread position:	1-398
Cow position:	chr1:6165751-6165344 (view UCSC Genome Browser custom track)
Alignm length:	414
Alignm identity:	321
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 113