Cow genome map

Conread name: ruio19_k16.y1

Conread position: 1-321
Cow position: chr16:27106419-27106091 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 82, 50

Conread position: 1-325
Cow position: chr16:45157932-45158268 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 1-326
Cow position: chr16:18678704-18678381 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 73

Conread position: 1-326
Cow position: chr16:51042474-51042803 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 225

Conread position: 1-330
Cow position: chr16:51043139-51042806 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 252

Conread position: 1-333
Cow position: chr16:43802366-43802015 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 82

Conread position: 1-342
Cow position: chr16:56149816-56149472 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 80

Conread position: 1-345
Cow position: chr16:14662085-14662439 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 1-345
Cow position: chr16:23872144-23872480 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 18

Conread position: 1-355
Cow position: chr16:53225296-53225668 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 20

Conread position: 1-361
Cow position: chr16:5726435-5726080 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 18

Conread position: 1-369
Cow position: chr16:11640908-11640538 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 103, 20

Conread position: 1-383
Cow position: chr16:2480122-2480509 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 50

Conread position: 1-389
Cow position: chr16:14441393-14441024 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 103, 62

Conread position: 1-389
Cow position: chr16:42133991-42133613 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 256
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 19, 71

Conread position: 1-389
Cow position: chr16:49169852-49170236 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 256

Conread position: 1-392
Cow position: chr16:30052971-30052582 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 134

Conread position: 1-396
Cow position: chr16:53621805-53622209 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 38

Conread position: 1-397
Cow position: chr16:11632806-11633212 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-397
Cow position: chr16:49515747-49516149 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 19

Conread position: 1-398
Cow position: chr16:46254215-46254606 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 236

Conread position: 1-399
Cow position: chr16:16096246-16095831 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 118

Conread position: 1-399
Cow position: chr16:24240363-24240770 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 1-399
Cow position: chr16:42079332-42079720 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 15

Conread position: 1-399
Cow position: chr16:42733253-42733655 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 223

Conread position: 1-400
Cow position: chr16:6389611-6390027 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 343

Conread position: 1-400
Cow position: chr16:20475741-20475332 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 332

Conread position: 1-400
Cow position: chr16:25174272-25173869 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 239

Conread position: 1-400
Cow position: chr16:46571540-46571945 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 203

Conread position: 1-401
Cow position: chr16:41576-41162 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 337

Conread position: 1-401
Cow position: chr16:192901-193309 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 235

Conread position: 1-401
Cow position: chr16:600449-600046 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 9

Conread position: 1-401
Cow position: chr16:840308-839899 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 292

Conread position: 1-401
Cow position: chr16:1734774-1734367 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 189

Conread position: 1-401
Cow position: chr16:2232682-2233098 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 130

Conread position: 1-401
Cow position: chr16:2724186-2724596 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 334

Conread position: 1-401
Cow position: chr16:3148003-3148412 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 173

Conread position: 1-401
Cow position: chr16:3332931-3332531 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 269

Conread position: 1-401
Cow position: chr16:3768970-3769383 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 327

Conread position: 1-401
Cow position: chr16:5350470-5350880 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr16:5435863-5435453 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr16:5488909-5488499 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 336

Conread position: 1-401
Cow position: chr16:5756973-5756556 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 241

Conread position: 1-401
Cow position: chr16:5833856-5833426 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 8

Conread position: 1-401
Cow position: chr16:5895468-5895071 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 173

Conread position: 1-401
Cow position: chr16:7010356-7009955 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 36

Conread position: 1-401
Cow position: chr16:7456950-7457354 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 1-401
Cow position: chr16:7467646-7467240 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 333

Conread position: 1-401
Cow position: chr16:7567103-7566695 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 20

Conread position: 1-401
Cow position: chr16:8813067-8813477 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr16:9786354-9785943 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 220

Conread position: 1-401
Cow position: chr16:10441276-10440867 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 326

Conread position: 1-401
Cow position: chr16:12160255-12160655 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 94

Conread position: 1-401
Cow position: chr16:15188093-15187692 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 168

Conread position: 1-401
Cow position: chr16:15485828-15485418 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 314

Conread position: 1-401
Cow position: chr16:15979340-15979750 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 236

Conread position: 1-401
Cow position: chr16:18744999-18745410 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 150

Conread position: 1-401
Cow position: chr16:19062872-19062464 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 123

Conread position: 1-401
Cow position: chr16:19409319-19409727 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 16

Conread position: 1-401
Cow position: chr16:20205018-20204631 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 166

Conread position: 1-401
Cow position: chr16:23532963-23533371 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 77

Conread position: 1-401
Cow position: chr16:23986351-23985941 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 236

Conread position: 1-401
Cow position: chr16:24147678-24147280 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 135

Conread position: 1-401
Cow position: chr16:25454440-25454833 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 181

Conread position: 1-401
Cow position: chr16:26500668-26500283 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 198

Conread position: 1-401
Cow position: chr16:26659002-26658593 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 98

Conread position: 1-401
Cow position: chr16:26666748-26666332 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 123

Conread position: 1-401
Cow position: chr16:27013428-27013025 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 88

Conread position: 1-401
Cow position: chr16:28206074-28206483 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 31

Conread position: 1-401
Cow position: chr16:28468085-28468495 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 327

Conread position: 1-401
Cow position: chr16:29158638-29158245 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 223

Conread position: 1-401
Cow position: chr16:29538785-29539183 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 50

Conread position: 1-401
Cow position: chr16:34483186-34482790 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 178

Conread position: 1-401
Cow position: chr16:37057955-37058385 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 16

Conread position: 1-401
Cow position: chr16:37477823-37478233 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 333

Conread position: 1-401
Cow position: chr16:39033314-39033717 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 186

Conread position: 1-401
Cow position: chr16:40293132-40293543 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 1-401
Cow position: chr16:43770111-43770529 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 26

Conread position: 1-401
Cow position: chr16:43894225-43894634 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 175

Conread position: 1-401
Cow position: chr16:44676393-44675981 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 326

Conread position: 1-401
Cow position: chr16:45609447-45609037 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 327

Conread position: 1-401
Cow position: chr16:47368010-47367614 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 175

Conread position: 1-401
Cow position: chr16:48341171-48341580 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 11

Conread position: 1-401
Cow position: chr16:48411682-48411263 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 342

Conread position: 1-401
Cow position: chr16:49142032-49142445 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 191

Conread position: 1-401
Cow position: chr16:53509482-53509899 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr16:54703506-54703124 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 352, 69

Conread position: 1-402
Cow position: chr16:56913205-56913611 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 2-299
Cow position: chr16:23472258-23471955 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 87

Conread position: 2-320
Cow position: chr16:7712653-7712326 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 2-321
Cow position: chr16:7701812-7701477 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 83

Conread position: 2-330
Cow position: chr16:45551372-45551049 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 59

Conread position: 2-345
Cow position: chr16:2426066-2426417 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 326

Conread position: 2-345
Cow position: chr16:23877511-23877160 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-345
Cow position: chr16:34021815-34022167 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 327

Conread position: 2-365
Cow position: chr16:39787967-39788340 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-367
Cow position: chr16:10866793-10866419 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 2-369
Cow position: chr16:14029119-14029501 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 26

Conread position: 2-380
Cow position: chr16:24752890-24753278 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 326

Conread position: 2-381
Cow position: chr16:7718244-7717853 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 328

Conread position: 2-383
Cow position: chr16:13662215-13662598 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 247
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 60, 170

Conread position: 2-383
Cow position: chr16:42745443-42745838 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 330

Conread position: 2-383
Cow position: chr16:49126678-49127055 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 56

Conread position: 2-397
Cow position: chr16:825507-825105 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 136

Conread position: 2-397
Cow position: chr16:16540434-16540042 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 258

Conread position: 2-397
Cow position: chr16:29738034-29738430 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 264
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 102, 141

Conread position: 2-399
Cow position: chr16:15349129-15349524 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 57

Conread position: 2-399
Cow position: chr16:19777900-19778308 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 147

Conread position: 2-399
Cow position: chr16:35342462-35342871 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 334

Conread position: 2-399
Cow position: chr16:46555459-46555052 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:2960716-2960307 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:4342882-4343278 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 72

Conread position: 2-401
Cow position: chr16:4722515-4722107 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 164

Conread position: 2-401
Cow position: chr16:5525064-5525471 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 163

Conread position: 2-401
Cow position: chr16:5666135-5665729 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 232

Conread position: 2-401
Cow position: chr16:6677754-6677349 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 214

Conread position: 2-401
Cow position: chr16:7385802-7385393 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 332

Conread position: 2-401
Cow position: chr16:8883970-8883561 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 332

Conread position: 2-401
Cow position: chr16:10372399-10372808 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 172

Conread position: 2-401
Cow position: chr16:12485263-12485672 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:12651957-12651556 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 311

Conread position: 2-401
Cow position: chr16:13721551-13721961 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 2-401
Cow position: chr16:14040462-14040053 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 2-401
Cow position: chr16:14100876-14100480 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 80

Conread position: 2-401
Cow position: chr16:15904184-15904592 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 331

Conread position: 2-401
Cow position: chr16:16149711-16150120 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr16:16942753-16942344 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr16:18212158-18212567 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:18650547-18650956 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:18975905-18975496 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:19082083-19081680 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 332

Conread position: 2-401
Cow position: chr16:20278877-20278468 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:22798676-22799076 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 58

Conread position: 2-401
Cow position: chr16:23248925-23249327 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 98

Conread position: 2-401
Cow position: chr16:23772638-23773047 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:24209361-24209770 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr16:24407949-24407538 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr16:24987466-24987876 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 2-401
Cow position: chr16:25075630-25075221 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:25880352-25879944 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 122

Conread position: 2-401
Cow position: chr16:26627788-26627380 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 72

Conread position: 2-401
Cow position: chr16:27592787-27593194 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 300

Conread position: 2-401
Cow position: chr16:28193264-28193672 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr16:32118614-32118207 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 189

Conread position: 2-401
Cow position: chr16:36247462-36247098 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 279
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 102, 57

Conread position: 2-401
Cow position: chr16:42211533-42211124 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:44450980-44450571 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:45464883-45465289 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 298

Conread position: 2-401
Cow position: chr16:45534490-45534090 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 139

Conread position: 2-401
Cow position: chr16:46385511-46385914 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 221

Conread position: 2-401
Cow position: chr16:47248125-47247700 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 342

Conread position: 2-401
Cow position: chr16:49097001-49096592 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:49779913-49780322 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:50712402-50712811 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr16:55151360-55150958 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 98

Conread position: 3-326
Cow position: chr16:26671101-26671426 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 126

Conread position: 3-361
Cow position: chr16:15805337-15804975 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 9

Conread position: 3-392
Cow position: chr16:11055003-11054629 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 117

Conread position: 3-394
Cow position: chr16:14722236-14722626 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 170

Conread position: 3-398
Cow position: chr16:39616251-39615853 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 242

Conread position: 3-399
Cow position: chr16:50190086-50190484 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 233

Conread position: 3-399
Cow position: chr16:51087817-51087413 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 29

Conread position: 3-401
Cow position: chr16:1563351-1563760 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 332

Conread position: 3-401
Cow position: chr16:2962821-2963229 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 334

Conread position: 3-401
Cow position: chr16:3012150-3011746 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 296

Conread position: 3-401
Cow position: chr16:4712405-4711995 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 154

Conread position: 3-401
Cow position: chr16:6379603-6380010 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 331

Conread position: 3-401
Cow position: chr16:14758220-14757816 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 23

Conread position: 3-401
Cow position: chr16:25444912-25444504 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 331

Conread position: 3-401
Cow position: chr16:46101584-46101991 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 29

Conread position: 3-401
Cow position: chr16:47404410-47404008 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 56

Conread position: 3-401
Cow position: chr16:48494880-48495290 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 322

Conread position: 3-401
Cow position: chr16:49253234-49253623 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 16

Conread position: 3-401
Cow position: chr16:52527264-52526859 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 97

Conread position: 4-350
Cow position: chr16:50519204-50518844 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 247
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 66, 79

Conread position: 4-401
Cow position: chr16:1957702-1958099 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 33

Conread position: 4-401
Cow position: chr16:12534933-12535326 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 256

Conread position: 4-402
Cow position: chr16:47773290-47772891 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 119

Conread position: 5-401
Cow position: chr16:31426086-31425686 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 134

Conread position: 5-401
Cow position: chr16:45654536-45654953 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 340

Conread position: 5-402
Cow position: chr16:54231319-54231721 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 132

Conread position: 6-401
Cow position: chr16:702282-701889 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 21

Conread position: 6-401
Cow position: chr16:15370008-15369618 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 55

Conread position: 8-351
Cow position: chr16:47518340-47517988 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 130

Conread position: 8-401
Cow position: chr16:25345006-25344607 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 107

Conread position: 10-345
Cow position: chr16:29107115-29107458 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 318

Conread position: 10-393
Cow position: chr16:24615046-24615439 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 318

Conread position: 10-401
Cow position: chr16:49577997-49577606 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 27

Conread position: 10-401
Cow position: chr16:52952211-52952612 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 324

Conread position: 13-401
Cow position: chr16:14570601-14570220 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 133

Conread position: 13-401
Cow position: chr16:15495475-15495082 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 33

Conread position: 14-389
Cow position: chr16:52588610-52588973 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 259
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 90, 42

Conread position: 14-401
Cow position: chr16:20503056-20502663 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 202

Conread position: 16-401
Cow position: chr16:7042909-7043304 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 318

Conread position: 23-313
Cow position: chr16:15655839-15655552 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 39, 117

Conread position: 23-401
Cow position: chr16:9417872-9417491 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 129

Conread position: 26-401
Cow position: chr16:44972733-44973119 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 69

Conread position: 27-321
Cow position: chr16:1223650-1223953 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 140

Conread position: 27-401
Cow position: chr16:5416262-5416648 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 309

Conread position: 27-401
Cow position: chr16:49509806-49510190 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 70

Conread position: 30-401
Cow position: chr16:41163769-41164146 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 70

Conread position: 36-312
Cow position: chr16:44050889-44051175 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 40-383
Cow position: chr16:46223505-46223865 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 295

Conread position: 56-391
Cow position: chr16:21091070-21090730 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 237
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 131, 49

Conread position: 56-396
Cow position: chr16:18205211-18204861 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 135

Conread position: 56-398
Cow position: chr16:3027391-3027063 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 107

Conread position: 56-401
Cow position: chr16:25157428-25157772 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 40

Conread position: 58-286
Cow position: chr16:48370733-48370983 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 46, 178

Conread position: 59-395
Cow position: chr16:23563410-23563087 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 60-369
Cow position: chr16:48677171-48677486 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 45, 272

Conread position: 60-391
Cow position: chr16:23810488-23810155 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 47

Conread position: 61-401
Cow position: chr16:13989258-13988919 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 60

Conread position: 65-401
Cow position: chr16:21018529-21018187 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 98

Conread position: 66-401
Cow position: chr16:41036070-41036398 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 76

Conread position: 68-401
Cow position: chr16:23059123-23059459 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 116

Conread position: 68-401
Cow position: chr16:41834833-41834493 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 165

Conread position: 72-401
Cow position: chr16:37670545-37670879 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 252

Conread position: 77-401
Cow position: chr16:29050603-29050273 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 156

Conread position: 82-401
Cow position: chr16:2305314-2304989 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 82-401
Cow position: chr16:8367773-8368098 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 224

Conread position: 82-401
Cow position: chr16:22320335-22320661 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 249

Conread position: 82-401
Cow position: chr16:43562440-43562768 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 251

Conread position: 83-401
Cow position: chr16:417846-417523 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 45

Conread position: 83-401
Cow position: chr16:4427043-4426718 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 251

Conread position: 83-401
Cow position: chr16:15570718-15570398 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 151

Conread position: 83-401
Cow position: chr16:42073948-42074270 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 28

Conread position: 85-401
Cow position: chr16:25743644-25743330 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 36

Conread position: 87-401
Cow position: chr16:7303706-7303384 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 245

Conread position: 87-401
Cow position: chr16:27730433-27730753 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 23

Conread position: 89-393
Cow position: chr16:19797745-19798059 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 15, 40

Conread position: 91-401
Cow position: chr16:23403758-23403442 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 208

Conread position: 92-345
Cow position: chr16:20595373-20595134 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 42

Conread position: 102-399
Cow position: chr16:29864401-29864700 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 167, 31

Conread position: 103-401
Cow position: chr16:48010480-48010769 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 69

Conread position: 105-395
Cow position: chr16:25169155-25168861 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 84

Conread position: 105-401
Cow position: chr16:40879522-40879220 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 225

Conread position: 106-360
Cow position: chr16:3632993-3632738 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 139, 115

Conread position: 108-400
Cow position: chr16:55682436-55682133 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 231

Conread position: 122-401
Cow position: chr16:28267805-28268088 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 51

Conread position: 124-401
Cow position: chr16:26990030-26990312 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 131, 90

Conread position: 134-401
Cow position: chr16:2407991-2408264 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 165

Conread position: 134-401
Cow position: chr16:24636616-24636886 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 116, 98

Conread position: 135-401
Cow position: chr16:16267019-16267272 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 103

Conread position: 137-280
Cow position: chr16:658895-658753 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 113, 25

Conread position: 137-392
Cow position: chr16:37445806-37446067 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 197
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 82, 96

Conread position: 137-399
Cow position: chr16:51400660-51400924 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 82

Conread position: 137-401
Cow position: chr16:7541378-7541110 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 26

Conread position: 137-401
Cow position: chr16:25935641-25935374 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 108, 175

Conread position: 138-381
Cow position: chr16:29679799-29680038 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 98, 0

Conread position: 139-400
Cow position: chr16:16237087-16237352 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 100, 23

Conread position: 139-401
Cow position: chr16:14351787-14352056 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 192

Conread position: 139-401
Cow position: chr16:18426287-18426034 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 79, 7

Conread position: 144-401
Cow position: chr16:4972633-4972897 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 183

Conread position: 144-402
Cow position: chr16:10859443-10859700 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 29

Conread position: 157-401
Cow position: chr16:12737159-12736908 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 75

Conread position: 158-397
Cow position: chr16:8871564-8871810 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 168

Conread position: 158-401
Cow position: chr16:4399117-4398881 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 144, 79

Conread position: 171-401
Cow position: chr16:26975340-26975573 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 126

Conread position: 173-381
Cow position: chr16:16625217-16625003 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 52

Conread position: 173-401
Cow position: chr16:23065861-23065637 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 48

Conread position: 173-401
Cow position: chr16:41576104-41575871 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 70

Conread position: 182-399
Cow position: chr16:44049071-44049294 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 63, 148

Conread position: 184-401
Cow position: chr16:18694115-18694340 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 128

Conread position: 185-387
Cow position: chr16:25964749-25964545 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 64

Conread position: 185-400
Cow position: chr16:37387952-37388169 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 60, 110

Conread position: 185-401
Cow position: chr16:42254470-42254685 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 14

Conread position: 188-399
Cow position: chr16:39457234-39457019 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 57, 138

Conread position: 188-401
Cow position: chr16:20378292-20378073 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 145

Conread position: 190-400
Cow position: chr16:16543288-16543083 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 62

Conread position: 197-369
Cow position: chr16:41804612-41804797 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 129

Conread position: 214-399
Cow position: chr16:7155420-7155234 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 18

Conread position: 219-398
Cow position: chr16:3030459-3030641 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 50, 31

Conread position: 219-399
Cow position: chr16:41515950-41515761 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 111

Conread position: 219-401
Cow position: chr16:45754819-45754998 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 50, 13

Conread position: 225-397
Cow position: chr16:2224141-2224317 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 70

Conread position: 226-401
Cow position: chr16:45703993-45704169 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 23

Conread position: 226-401
Cow position: chr16:49219147-49219324 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 45, 28

Conread position: 230-399
Cow position: chr16:37454688-37454854 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 35

Conread position: 232-399
Cow position: chr16:4691214-4691044 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 89

Conread position: 233-399
Cow position: chr16:4367421-4367251 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 96

Conread position: 237-401
Cow position: chr16:37925190-37925358 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 32, 14

Conread position: 239-400
Cow position: chr16:39645778-39645612 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 83

Conread position: 248-401
Cow position: chr16:3820153-3819995 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 13

Conread position: 266-400
Cow position: chr16:55591239-55591373 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 62

Conread position: 267-401
Cow position: chr16:12244282-12244416 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 52

Conread position: 267-401
Cow position: chr16:49230517-49230653 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 81, 61

Conread position: 269-401
Cow position: chr16:23711526-23711659 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 56

Conread position: 293-401
Cow position: chr16:15409348-15409457 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 32

Conread position: 401-491
Cow position: chr16:33704356-33704447 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 402-493
Cow position: chr16:49126632-49126540 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.