Cow genome map

Conread name: ruio19_k16.y1

Conread position: 1-345
Cow position:
Alignm length: 354
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 185

Conread position: 1-379
Cow position:
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 39

Conread position: 1-384
Cow position:
Alignm length: 391
Alignm identity: 250
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 61, 41

Conread position: 1-384
Cow position:
Alignm length: 400
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 105

Conread position: 1-391
Cow position:
Alignm length: 411
Alignm identity: 269
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 61, 305

Conread position: 1-392
Cow position:
Alignm length: 400
Alignm identity: 268
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 104, 20

Conread position: 1-392
Cow position:
Alignm length: 404
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 8

Conread position: 1-394
Cow position:
Alignm length: 406
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 19

Conread position: 1-397
Cow position:
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 176

Conread position: 1-398
Cow position:
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 36

Conread position: 1-398
Cow position:
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 20

Conread position: 1-398
Cow position:
Alignm length: 408
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 333

Conread position: 1-399
Cow position:
Alignm length: 416
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 116

Conread position: 1-399
Cow position:
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 110

Conread position: 1-399
Cow position:
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 307

Conread position: 1-399
Cow position:
Alignm length: 411
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 186

Conread position: 1-399
Cow position:
Alignm length: 412
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 191

Conread position: 1-399
Cow position:
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 61

Conread position: 1-399
Cow position:
Alignm length: 409
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-399
Cow position:
Alignm length: 411
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 171

Conread position: 1-400
Cow position:
Alignm length: 409
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 149

Conread position: 1-400
Cow position:
Alignm length: 411
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 185

Conread position: 1-400
Cow position:
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 79

Conread position: 1-401
Cow position:
Alignm length: 407
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 98

Conread position: 1-401
Cow position:
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 344

Conread position: 1-401
Cow position:
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 15

Conread position: 1-401
Cow position:
Alignm length: 407
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 73

Conread position: 1-401
Cow position:
Alignm length: 410
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 259

Conread position: 1-401
Cow position:
Alignm length: 428
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 37

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 315

Conread position: 1-401
Cow position:
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 96

Conread position: 1-401
Cow position:
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 221

Conread position: 1-401
Cow position:
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 39

Conread position: 1-401
Cow position:
Alignm length: 411
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 327

Conread position: 1-401
Cow position:
Alignm length: 417
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 171

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position:
Alignm length: 408
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 185

Conread position: 1-401
Cow position:
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 84

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 34

Conread position: 1-401
Cow position:
Alignm length: 413
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 247

Conread position: 1-401
Cow position:
Alignm length: 409
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 107

Conread position: 1-401
Cow position:
Alignm length: 409
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 128

Conread position: 2-345
Cow position:
Alignm length: 361
Alignm identity: 244
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 60, 38

Conread position: 2-345
Cow position:
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 183

Conread position: 2-367
Cow position:
Alignm length: 377
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 326

Conread position: 2-389
Cow position:
Alignm length: 400
Alignm identity: 262
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 73, 60

Conread position: 2-399
Cow position:
Alignm length: 407
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 234

Conread position: 2-400
Cow position:
Alignm length: 407
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 239

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position:
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 327

Conread position: 2-401
Cow position:
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 174

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 10

Conread position: 2-401
Cow position:
Alignm length: 412
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 295

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 57

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 10

Conread position: 2-401
Cow position:
Alignm length: 409
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 134

Conread position: 2-401
Cow position:
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 300

Conread position: 2-401
Cow position:
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 336

Conread position: 2-401
Cow position:
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 191

Conread position: 2-401
Cow position:
Alignm length: 409
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 243

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 135

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position:
Alignm length: 413
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 328

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 332

Conread position: 2-401
Cow position:
Alignm length: 410
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 34

Conread position: 2-401
Cow position:
Alignm length: 409
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 332

Conread position: 2-401
Cow position:
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 38

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 24

Conread position: 2-401
Cow position:
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 105

Conread position: 2-401
Cow position:
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 21

Conread position: 3-369
Cow position:
Alignm length: 377
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 193

Conread position: 3-381
Cow position:
Alignm length: 389
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 42

Conread position: 3-392
Cow position:
Alignm length: 396
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 185

Conread position: 3-399
Cow position:
Alignm length: 408
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 23

Conread position: 3-401
Cow position:
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 337

Conread position: 3-401
Cow position:
Alignm length: 408
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 149

Conread position: 4-383
Cow position:
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 196

Conread position: 4-399
Cow position:
Alignm length: 408
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 165

Conread position: 4-401
Cow position:
Alignm length: 408
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 94

Conread position: 4-401
Cow position:
Alignm length: 409
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 111

Conread position: 4-401
Cow position:
Alignm length: 407
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 249

Conread position: 4-401
Cow position:
Alignm length: 406
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 62

Conread position: 5-401
Cow position:
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 180

Conread position: 5-401
Cow position:
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 41

Conread position: 10-398
Cow position:
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 261

Conread position: 10-400
Cow position:
Alignm length: 402
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 324

Conread position: 10-401
Cow position:
Alignm length: 402
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 114

Conread position: 14-401
Cow position:
Alignm length: 395
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 254

Conread position: 15-401
Cow position:
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 186

Conread position: 16-401
Cow position:
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 312

Conread position: 26-393
Cow position:
Alignm length: 380
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 298

Conread position: 28-321
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 208

Conread position: 36-401
Cow position:
Alignm length: 389
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 26

Conread position: 47-401
Cow position:
Alignm length: 364
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 15

Conread position: 50-401
Cow position:
Alignm length: 361
Alignm identity: 219
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 27, 250

Conread position: 55-401
Cow position:
Alignm length: 352
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 272

Conread position: 56-397
Cow position:
Alignm length: 349
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 82

Conread position: 68-399
Cow position:
Alignm length: 340
Alignm identity: 232
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 37, 82

Conread position: 71-397
Cow position:
Alignm length: 341
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 71-401
Cow position:
Alignm length: 339
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 112

Conread position: 73-401
Cow position:
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 76-398
Cow position:
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 73

Conread position: 79-392
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 25, 236

Conread position: 82-361
Cow position:
Alignm length: 288
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 31

Conread position: 82-401
Cow position:
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 249

Conread position: 82-401
Cow position:
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 249

Conread position: 85-383
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 17, 123

Conread position: 85-401
Cow position:
Alignm length: 329
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 218

Conread position: 85-401
Cow position:
Alignm length: 326
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 246

Conread position: 95-399
Cow position:
Alignm length: 310
Alignm identity: 204
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 176, 67

Conread position: 106-379
Cow position:
Alignm length: 282
Alignm identity: 196
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 19, 156

Conread position: 111-387
Cow position:
Alignm length: 290
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 219

Conread position: 111-401
Cow position:
Alignm length: 293
Alignm identity: 204
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 236, 157

Conread position: 115-379
Cow position:
Alignm length: 272
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 209

Conread position: 118-401
Cow position:
Alignm length: 291
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 212

Conread position: 123-401
Cow position:
Alignm length: 288
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 5

Conread position: 126-401
Cow position:
Alignm length: 283
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 204

Conread position: 132-401
Cow position:
Alignm length: 281
Alignm identity: 207
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 112, 165

Conread position: 135-366
Cow position:
Alignm length: 246
Alignm identity: 190
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 97, 203

Conread position: 139-401
Cow position:
Alignm length: 270
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 191

Conread position: 139-401
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 27

Conread position: 152-352
Cow position:
Alignm length: 204
Alignm identity: 159
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 119, 102

Conread position: 175-401
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 70, 155

Conread position: 177-375
Cow position:
Alignm length: 208
Alignm identity: 155
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 68, 142

Conread position: 185-401
Cow position:
Alignm length: 224
Alignm identity: 167
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 145

Conread position: 186-399
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 59, 138

Conread position: 199-401
Cow position:
Alignm length: 207
Alignm identity: 144
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 129

Conread position: 217-401
Cow position:
Alignm length: 189
Alignm identity: 131
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 52, 111

Conread position: 220-401
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 111

Conread position: 221-401
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 11

Conread position: 225-395
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 104

Conread position: 226-395
Cow position:
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 35

Conread position: 232-401
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 98

Conread position: 269-401
Cow position:
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 56

Show alignments to all cow chromosomes.