Cow genome map

Conread name: ruio19_k16.y1

Conread position: 1-345
Cow position:
Alignm length: 354
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 36

Conread position: 1-361
Cow position:
Alignm length: 376
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 328

Conread position: 1-383
Cow position:
Alignm length: 390
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 31

Conread position: 1-383
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 118

Conread position: 1-385
Cow position:
Alignm length: 397
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 16

Conread position: 1-386
Cow position:
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 329

Conread position: 1-391
Cow position:
Alignm length: 405
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 244

Conread position: 1-393
Cow position:
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 333

Conread position: 1-395
Cow position:
Alignm length: 402
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 203

Conread position: 1-397
Cow position:
Alignm length: 408
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 327

Conread position: 1-399
Cow position:
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 39

Conread position: 1-399
Cow position:
Alignm length: 423
Alignm identity: 283
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 20

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 144

Conread position: 1-401
Cow position:
Alignm length: 423
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 171

Conread position: 1-401
Cow position:
Alignm length: 408
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 73

Conread position: 1-401
Cow position:
Alignm length: 406
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 1-401
Cow position:
Alignm length: 414
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 335

Conread position: 1-401
Cow position:
Alignm length: 411
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 235

Conread position: 1-401
Cow position:
Alignm length: 404
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 61

Conread position: 1-401
Cow position:
Alignm length: 413
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 37

Conread position: 1-401
Cow position:
Alignm length: 422
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 343

Conread position: 1-401
Cow position:
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 173

Conread position: 1-401
Cow position:
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 135

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 135

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 328

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 78

Conread position: 1-401
Cow position:
Alignm length: 421
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 342

Conread position: 1-401
Cow position:
Alignm length: 408
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 235

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 320

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position:
Alignm length: 417
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 118

Conread position: 1-401
Cow position:
Alignm length: 420
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 341

Conread position: 1-401
Cow position:
Alignm length: 413
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 236

Conread position: 2-322
Cow position:
Alignm length: 330
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 2-345
Cow position:
Alignm length: 353
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-345
Cow position:
Alignm length: 353
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-392
Cow position:
Alignm length: 405
Alignm identity: 260
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 18

Conread position: 2-393
Cow position:
Alignm length: 403
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 219

Conread position: 2-399
Cow position:
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 46

Conread position: 2-399
Cow position:
Alignm length: 410
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 38

Conread position: 2-399
Cow position:
Alignm length: 409
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 289

Conread position: 2-400
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 234

Conread position: 2-401
Cow position:
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 327

Conread position: 2-401
Cow position:
Alignm length: 412
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 333

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position:
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 138

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 117

Conread position: 2-401
Cow position:
Alignm length: 406
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 327

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 147

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 331

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 320

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 412
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 170

Conread position: 2-401
Cow position:
Alignm length: 409
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 185

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 406
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 239

Conread position: 2-401
Cow position:
Alignm length: 409
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 218

Conread position: 2-401
Cow position:
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 172

Conread position: 2-401
Cow position:
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 300

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 150

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 300

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 300

Conread position: 3-394
Cow position:
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 213

Conread position: 3-401
Cow position:
Alignm length: 409
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 332

Conread position: 3-401
Cow position:
Alignm length: 420
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 341

Conread position: 3-401
Cow position:
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 180

Conread position: 4-365
Cow position:
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 256

Conread position: 4-381
Cow position:
Alignm length: 386
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 236

Conread position: 4-399
Cow position:
Alignm length: 407
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 187

Conread position: 5-379
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 60

Conread position: 7-398
Cow position:
Alignm length: 403
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 332

Conread position: 7-398
Cow position:
Alignm length: 403
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 55

Conread position: 7-401
Cow position:
Alignm length: 402
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 91

Conread position: 9-401
Cow position:
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 177

Conread position: 26-401
Cow position:
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 91

Conread position: 30-401
Cow position:
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 99

Conread position: 50-390
Cow position:
Alignm length: 352
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 146

Conread position: 53-393
Cow position:
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 180

Conread position: 55-401
Cow position:
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 209

Conread position: 56-401
Cow position:
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 127

Conread position: 65-401
Cow position:
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 200

Conread position: 71-401
Cow position:
Alignm length: 338
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 227

Conread position: 80-353
Cow position:
Alignm length: 299
Alignm identity: 216
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 24, 166

Conread position: 83-392
Cow position:
Alignm length: 319
Alignm identity: 216
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 22, 82

Conread position: 98-401
Cow position:
Alignm length: 315
Alignm identity: 211
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 6, 149

Conread position: 102-401
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 44

Conread position: 104-401
Cow position:
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 220

Conread position: 105-397
Cow position:
Alignm length: 302
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 105-402
Cow position:
Alignm length: 305
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 225

Conread position: 116-392
Cow position:
Alignm length: 286
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 209

Conread position: 116-401
Cow position:
Alignm length: 289
Alignm identity: 209
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 106, 136

Conread position: 127-401
Cow position:
Alignm length: 282
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 203

Conread position: 135-389
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 99

Conread position: 137-401
Cow position:
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 121, 26

Conread position: 137-402
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 102, 200

Conread position: 138-399
Cow position:
Alignm length: 269
Alignm identity: 193
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 117, 186

Conread position: 139-401
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 112, 23

Conread position: 139-401
Cow position:
Alignm length: 270
Alignm identity: 199
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 116, 93

Conread position: 140-398
Cow position:
Alignm length: 271
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 82, 187

Conread position: 148-397
Cow position:
Alignm length: 254
Alignm identity: 190
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 55, 125

Conread position: 150-401
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 158-399
Cow position:
Alignm length: 249
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 76

Conread position: 165-401
Cow position:
Alignm length: 244
Alignm identity: 181
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 80, 165

Conread position: 173-391
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 10

Conread position: 175-401
Cow position:
Alignm length: 234
Alignm identity: 175
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 70, 155

Conread position: 186-395
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 38, 56

Conread position: 189-401
Cow position:
Alignm length: 218
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 80, 65

Conread position: 192-401
Cow position:
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 27

Conread position: 238-401
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 91

Conread position: 242-401
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 102, 25

Conread position: 402-493
Cow position:
Alignm length: 93
Alignm identity: 79
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.