Cow genome map

Conread name: ruio19_k16.y1

Conread position: 1-323
Cow position:
Alignm length: 344
Alignm identity: 240
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 46, 15

Conread position: 1-333
Cow position:
Alignm length: 343
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 328

Conread position: 1-346
Cow position:
Alignm length: 362
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 186

Conread position: 1-379
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 39, 49

Conread position: 1-383
Cow position:
Alignm length: 392
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 300

Conread position: 1-389
Cow position:
Alignm length: 405
Alignm identity: 279
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 58, 106

Conread position: 1-393
Cow position:
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 25

Conread position: 1-395
Cow position:
Alignm length: 403
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 168

Conread position: 1-398
Cow position:
Alignm length: 409
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-398
Cow position:
Alignm length: 421
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 345

Conread position: 1-399
Cow position:
Alignm length: 408
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 31

Conread position: 1-399
Cow position:
Alignm length: 412
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 326

Conread position: 1-401
Cow position:
Alignm length: 410
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 75

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 177

Conread position: 1-401
Cow position:
Alignm length: 411
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 332

Conread position: 1-401
Cow position:
Alignm length: 410
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 22

Conread position: 1-401
Cow position:
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 107

Conread position: 1-401
Cow position:
Alignm length: 427
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 179

Conread position: 1-401
Cow position:
Alignm length: 413
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 334

Conread position: 1-401
Cow position:
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 339

Conread position: 1-401
Cow position:
Alignm length: 430
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 364

Conread position: 1-401
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 188

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position:
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 102

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 25

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 135

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 235

Conread position: 1-401
Cow position:
Alignm length: 433
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 192

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 181

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 106

Conread position: 1-401
Cow position:
Alignm length: 414
Alignm identity: 277
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 55, 106

Conread position: 1-401
Cow position:
Alignm length: 418
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 65

Conread position: 1-401
Cow position:
Alignm length: 426
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 211

Conread position: 1-401
Cow position:
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 332

Conread position: 1-401
Cow position:
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 325

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position:
Alignm length: 416
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position:
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 102

Conread position: 1-401
Cow position:
Alignm length: 415
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 327

Conread position: 1-401
Cow position:
Alignm length: 412
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position:
Alignm length: 409
Alignm identity: 269
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 90, 69

Conread position: 1-401
Cow position:
Alignm length: 411
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 28

Conread position: 1-402
Cow position:
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 325

Conread position: 2-345
Cow position:
Alignm length: 352
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 325

Conread position: 2-345
Cow position:
Alignm length: 353
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 194

Conread position: 2-345
Cow position:
Alignm length: 354
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 327

Conread position: 2-345
Cow position:
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-361
Cow position:
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 72

Conread position: 2-393
Cow position:
Alignm length: 410
Alignm identity: 273
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 68, 56

Conread position: 2-397
Cow position:
Alignm length: 403
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 330

Conread position: 2-398
Cow position:
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 38

Conread position: 2-399
Cow position:
Alignm length: 411
Alignm identity: 267
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 57, 328

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 122

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 175

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 13

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 234

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 297

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 180

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 212

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 95

Conread position: 2-401
Cow position:
Alignm length: 406
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 142

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 412
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 44

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position:
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 332

Conread position: 3-374
Cow position:
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 163

Conread position: 3-398
Cow position:
Alignm length: 405
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 103

Conread position: 3-399
Cow position:
Alignm length: 408
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 26

Conread position: 3-399
Cow position:
Alignm length: 411
Alignm identity: 276
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 101, 64

Conread position: 3-401
Cow position:
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 82

Conread position: 4-401
Cow position:
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 17

Conread position: 4-401
Cow position:
Alignm length: 406
Alignm identity: 281
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 23, 17

Conread position: 4-401
Cow position:
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 47

Conread position: 5-401
Cow position:
Alignm length: 409
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 208

Conread position: 9-399
Cow position:
Alignm length: 399
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 264

Conread position: 10-401
Cow position:
Alignm length: 411
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 186

Conread position: 11-369
Cow position:
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 25

Conread position: 18-401
Cow position:
Alignm length: 395
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 316

Conread position: 23-401
Cow position:
Alignm length: 385
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 103

Conread position: 24-401
Cow position:
Alignm length: 390
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 217

Conread position: 29-393
Cow position:
Alignm length: 379
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 45

Conread position: 41-401
Cow position:
Alignm length: 372
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 135

Conread position: 43-345
Cow position:
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 281

Conread position: 50-394
Cow position:
Alignm length: 352
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 147

Conread position: 50-398
Cow position:
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 81

Conread position: 53-386
Cow position:
Alignm length: 344
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 274

Conread position: 56-401
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 127

Conread position: 68-401
Cow position:
Alignm length: 351
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 273

Conread position: 75-397
Cow position:
Alignm length: 326
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 118

Conread position: 83-401
Cow position:
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 126

Conread position: 99-401
Cow position:
Alignm length: 310
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 6

Conread position: 104-399
Cow position:
Alignm length: 303
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 12

Conread position: 104-401
Cow position:
Alignm length: 305
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 82

Conread position: 114-394
Cow position:
Alignm length: 292
Alignm identity: 209
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 132, 60

Conread position: 114-401
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 21

Conread position: 122-413
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 149, 47

Conread position: 127-397
Cow position:
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 199

Conread position: 137-345
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 108, 185

Conread position: 137-401
Cow position:
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 193

Conread position: 138-326
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 107, 54

Conread position: 145-401
Cow position:
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 87

Conread position: 151-401
Cow position:
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 179

Conread position: 154-399
Cow position:
Alignm length: 249
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 193, 61

Conread position: 176-402
Cow position:
Alignm length: 234
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 148

Conread position: 177-401
Cow position:
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 68, 154

Conread position: 179-401
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 13, 143

Conread position: 181-401
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 102

Conread position: 190-401
Cow position:
Alignm length: 219
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 55, 23

Conread position: 197-401
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 128

Conread position: 226-401
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 104

Conread position: 233-401
Cow position:
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 89

Conread position: 238-401
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 84

Conread position: 267-401
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 61

Conread position: 269-401
Cow position:
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 85, 56

Conread position: 401-491
Cow position:
Alignm length: 92
Alignm identity: 79
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 401-493
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.