Cow genome map
| Conread name: | ruio19_k16.y1 | 
| Conread position: | 1-299 | 
| Cow position: | chr6:51879420-51879122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 23, 136 | 
| Conread position: | 1-321 | 
| Cow position: | chr6:24988737-24988408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 166 | 
| Conread position: | 1-321 | 
| Cow position: | chr6:46570672-46570342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 20 | 
| Conread position: | 1-339 | 
| Cow position: | chr6:32125644-32125295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 226 | 
| Conread position: | 1-345 | 
| Cow position: | chr6:47977627-47977277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 195 | 
| Conread position: | 1-352 | 
| Cow position: | chr6:11192888-11193245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 57 | 
| Conread position: | 1-353 | 
| Cow position: | chr6:47988607-47988261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 223, 31 | 
| Conread position: | 1-360 | 
| Cow position: | chr6:46292783-46293145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 93 | 
| Conread position: | 1-361 | 
| Cow position: | chr6:4389408-4389039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 326 | 
| Conread position: | 1-366 | 
| Cow position: | chr6:42420814-42420439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 310 | 
| Conread position: | 1-383 | 
| Cow position: | chr6:1263855-1263460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 171 | 
| Conread position: | 1-383 | 
| Cow position: | chr6:27342278-27341899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 55, 20 | 
| Conread position: | 1-388 | 
| Cow position: | chr6:51674461-51674065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 74 | 
| Conread position: | 1-389 | 
| Cow position: | chr6:47155077-47154705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 103, 22 | 
| Conread position: | 1-390 | 
| Cow position: | chr6:19059969-19059573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 88 | 
| Conread position: | 1-392 | 
| Cow position: | chr6:49733481-49733081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 52, 118 | 
| Conread position: | 1-393 | 
| Cow position: | chr6:41410297-41409897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 333 | 
| Conread position: | 1-393 | 
| Cow position: | chr6:50637952-50637562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 172 | 
| Conread position: | 1-395 | 
| Cow position: | chr6:706690-706290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 113 | 
| Conread position: | 1-395 | 
| Cow position: | chr6:12352534-12352134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 20 | 
| Conread position: | 1-397 | 
| Cow position: | chr6:46283410-46283809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 33 | 
| Conread position: | 1-397 | 
| Cow position: | chr6:47383281-47382885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 277 | 
| Conread position: | 1-398 | 
| Cow position: | chr6:24623450-24623854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 143 | 
| Conread position: | 1-398 | 
| Cow position: | chr6:35884504-35884100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 26 | 
| Conread position: | 1-398 | 
| Cow position: | chr6:42267412-42267017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 116 | 
| Conread position: | 1-399 | 
| Cow position: | chr6:2582306-2581891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 68 | 
| Conread position: | 1-399 | 
| Cow position: | chr6:9839433-9839849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 149 | 
| Conread position: | 1-399 | 
| Cow position: | chr6:38872832-38873240 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 333 | 
| Conread position: | 1-399 | 
| Cow position: | chr6:43789672-43790080 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 333 | 
| Conread position: | 1-399 | 
| Cow position: | chr6:45065485-45065867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 35 | 
| Conread position: | 1-399 | 
| Cow position: | chr6:47171743-47171350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 175 | 
| Conread position: | 1-399 | 
| Cow position: | chr6:60876991-60876584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 235 | 
| Conread position: | 1-399 | 
| Cow position: | chr6:65910021-65909615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 281 | 
| Conread position: | 1-400 | 
| Cow position: | chr6:11721520-11721921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 185 | 
| Conread position: | 1-400 | 
| Cow position: | chr6:34548718-34548320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 108 | 
| Conread position: | 1-400 | 
| Cow position: | chr6:44510790-44510374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 20 | 
| Conread position: | 1-400 | 
| Cow position: | chr6:55903785-55903376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 333 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:1834690-1834281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 35 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:1887101-1887510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 127 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:2110719-2111114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 106 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:2607160-2606751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 192 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:3271785-3272196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 237 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:4468310-4467909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 123 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:5946079-5946489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 333 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:6182031-6182433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 176 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:6459805-6459394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 310 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:6613986-6613582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 8 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:6721670-6721260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 5, 135 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:7190928-7191326 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 224 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:7216480-7216081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 9 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:8205883-8205473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 327 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:8535103-8535508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 205 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:8753762-8754169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 114 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:10236878-10236481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 129 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:12387779-12388176 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 139 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:12927264-12926859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 271 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:13307702-13308112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 333 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:14199737-14199331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 76 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:14851065-14851462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 144 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:15137477-15137887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 337 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:16049600-16050007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 105 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:17050066-17049659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 58 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:17111470-17111879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 327 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:17344891-17344484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 82 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:19044886-19044492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 226 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:20451652-20451246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 20 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:22225305-22225703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 107 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:24242981-24242573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 31 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:24631558-24631960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 221 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:27173537-27173127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 333 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:33301365-33300951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 326 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:33451517-33451130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 105 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:34030949-34030546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 81 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:34075572-34075153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 251 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:34494364-34493961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 58 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:35873039-35873443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 186 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:36531971-36531560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 334 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:39093312-39092903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 332 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:39330836-39331247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 334 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:39913018-39912608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 333 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:40157840-40158256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 74 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:40975861-40975454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 253 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:44017132-44017542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 236 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:45666244-45666644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 31 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:47039515-47039924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 333 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:47540070-47539665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 92 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:47574481-47574076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 151 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:50120239-50120644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 39 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:51718251-51717840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 234 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:53461475-53461893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 202 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:53673038-53672619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 342 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:53811261-53810873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 37 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:55170166-55169770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 136 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:55538579-55538985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 73 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:55593760-55593356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 61 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:57473941-57473547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 69, 138 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:63040639-63041043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 331 | 
| Conread position: | 1-402 | 
| Cow position: | chr6:479242-478835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 252 | 
| Conread position: | 1-402 | 
| Cow position: | chr6:14897876-14897465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 13 | 
| Conread position: | 1-402 | 
| Cow position: | chr6:40550005-40550415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 181 | 
| Conread position: | 1-403 | 
| Cow position: | chr6:17122085-17121674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 327 | 
| Conread position: | 1-405 | 
| Cow position: | chr6:67187242-67186823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 106 | 
| Conread position: | 2-333 | 
| Cow position: | chr6:41823142-41823481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-341 | 
| Cow position: | chr6:19719265-19718916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 34 | 
| Conread position: | 2-345 | 
| Cow position: | chr6:41495143-41495493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 145 | 
| Conread position: | 2-345 | 
| Cow position: | chr6:45723430-45723781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 326 | 
| Conread position: | 2-345 | 
| Cow position: | chr6:57308916-57308568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 323 | 
| Conread position: | 2-357 | 
| Cow position: | chr6:56556917-56557282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-359 | 
| Cow position: | chr6:28486966-28487331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-365 | 
| Cow position: | chr6:14929139-14928773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 77 | 
| Conread position: | 2-366 | 
| Cow position: | chr6:43049706-43049333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 72 | 
| Conread position: | 2-367 | 
| Cow position: | chr6:28401340-28400965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-383 | 
| Cow position: | chr6:54900784-54900393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-391 | 
| Cow position: | chr6:42481576-42481177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-393 | 
| Cow position: | chr6:38917344-38917746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 327 | 
| Conread position: | 2-396 | 
| Cow position: | chr6:10536284-10536688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-397 | 
| Cow position: | chr6:51877449-51877044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 44 | 
| Conread position: | 2-398 | 
| Cow position: | chr6:16410749-16410344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 184 | 
| Conread position: | 2-398 | 
| Cow position: | chr6:33949469-33949870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 234 | 
| Conread position: | 2-398 | 
| Cow position: | chr6:46763711-46764117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 332 | 
| Conread position: | 2-399 | 
| Cow position: | chr6:451569-451975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 144 | 
| Conread position: | 2-399 | 
| Cow position: | chr6:889250-888845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 178 | 
| Conread position: | 2-399 | 
| Cow position: | chr6:2088204-2087811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 19 | 
| Conread position: | 2-399 | 
| Cow position: | chr6:11288773-11289179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 113 | 
| Conread position: | 2-399 | 
| Cow position: | chr6:28065683-28065278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 24 | 
| Conread position: | 2-399 | 
| Cow position: | chr6:53739986-53739576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 104 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:126440-126849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:327668-328077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 306 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:1406458-1406861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 233 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:1797320-1796911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:2089953-2089560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 55 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:2875341-2875748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 143 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:3152907-3152501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 168 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:4681302-4680889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 233 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:6568539-6568945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 298 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:7137647-7138056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:7449190-7448781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:7466956-7467364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:9235207-9234797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 333 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:10044901-10044501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 312 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:11020353-11019944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:11402015-11401606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:11453172-11453581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:11869241-11869648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 331 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:12662638-12663029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 57 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:12972091-12971682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:12998111-12997705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 172 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:16417996-16418396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 258 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:16593640-16593236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 18 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:16625486-16625066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 346 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:18912039-18912448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 304 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:19103213-19103622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:19712550-19712959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:20215701-20216110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:20581084-20581490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 194 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:21163998-21163589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:21712401-21711992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:21831966-21832375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 195 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:22043315-22043723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 165 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:22737011-22737420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:23567913-23568307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 137 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:23879364-23879770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 289 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:24583696-24584112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 209 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:25374413-25374822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:26324506-26324914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 30 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:26667330-26667738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 331 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:26830222-26829813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:27093892-27094301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:28136433-28136038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 234 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:28161104-28160695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:28184626-28185033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 234 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:29484669-29484264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 253 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:33808739-33809148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:33921708-33922119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 182 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:34017029-34017436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 233 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:34503830-34504235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 39 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:35703836-35704231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 136 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:37217334-37216925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:37388261-37387852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:39080612-39080203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:39897368-39897777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:40251109-40251513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 10 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:42897885-42897473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 335 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:44146256-44146661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 174 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:45479393-45479802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:45901298-45901706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 331 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:45937974-45937565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:45976194-45975785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:46225270-46225676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 323 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:46948510-46948102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 289 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:47381365-47380969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 146 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:53537771-53537362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:55239385-55238976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:56842717-56842307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 335 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:57329973-57329564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:57521870-57521461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:58036977-58036567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 19 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:59596950-59596527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 342 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:60379858-60379449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:62333056-62333463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 24 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:62665470-62665061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:63177738-63177329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-401 | 
| Cow position: | chr6:63714581-63714990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 332 | 
| Conread position: | 2-493 | 
| Cow position: | chr6:54978834-54979342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 326 | 
| Conread position: | 3-315 | 
| Cow position: | chr6:11169259-11168948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 164, 74 | 
| Conread position: | 3-321 | 
| Cow position: | chr6:28979850-28980169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 45 | 
| Conread position: | 3-383 | 
| Cow position: | chr6:40814055-40813665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 234 | 
| Conread position: | 3-392 | 
| Cow position: | chr6:29084706-29085087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 56 | 
| Conread position: | 3-392 | 
| Cow position: | chr6:33984489-33984110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 57, 251 | 
| Conread position: | 3-395 | 
| Cow position: | chr6:39137185-39136796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 183 | 
| Conread position: | 3-399 | 
| Cow position: | chr6:32420634-32420236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 237 | 
| Conread position: | 3-399 | 
| Cow position: | chr6:40319954-40319549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 37 | 
| Conread position: | 3-401 | 
| Cow position: | chr6:3885813-3886219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 108 | 
| Conread position: | 3-401 | 
| Cow position: | chr6:15275547-15275954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 334 | 
| Conread position: | 3-401 | 
| Cow position: | chr6:55361101-55361509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 331 | 
| Conread position: | 3-401 | 
| Cow position: | chr6:58031459-58031063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 15 | 
| Conread position: | 3-401 | 
| Cow position: | chr6:67553926-67553518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 331 | 
| Conread position: | 3-402 | 
| Cow position: | chr6:3484726-3485134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 138 | 
| Conread position: | 3-403 | 
| Cow position: | chr6:366760-366345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 425 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 346 | 
| Conread position: | 3-411 | 
| Cow position: | chr6:42988108-42988529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 90 | 
| Conread position: | 4-365 | 
| Cow position: | chr6:65930913-65930548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 208 | 
| Conread position: | 4-394 | 
| Cow position: | chr6:3928827-3928429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 23 | 
| Conread position: | 4-397 | 
| Cow position: | chr6:10695403-10695012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 17 | 
| Conread position: | 4-399 | 
| Cow position: | chr6:9737571-9737966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 268 | 
| Conread position: | 4-401 | 
| Cow position: | chr6:1245228-1245635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 330 | 
| Conread position: | 4-401 | 
| Cow position: | chr6:6119312-6119707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 182 | 
| Conread position: | 4-401 | 
| Cow position: | chr6:15783296-15783707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 333 | 
| Conread position: | 5-401 | 
| Cow position: | chr6:65847679-65848083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 235 | 
| Conread position: | 7-345 | 
| Cow position: | chr6:40139605-40139940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 139 | 
| Conread position: | 7-398 | 
| Cow position: | chr6:58914651-58915047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 69 | 
| Conread position: | 10-397 | 
| Cow position: | chr6:29689541-29689146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 77 | 
| Conread position: | 10-401 | 
| Cow position: | chr6:10266445-10266841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 163 | 
| Conread position: | 10-401 | 
| Cow position: | chr6:10598669-10598287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 36 | 
| Conread position: | 10-401 | 
| Cow position: | chr6:35601347-35600964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 27 | 
| Conread position: | 16-399 | 
| Cow position: | chr6:51150623-51150230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 312 | 
| Conread position: | 17-401 | 
| Cow position: | chr6:53542805-53543197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 57 | 
| Conread position: | 22-401 | 
| Cow position: | chr6:10650134-10650508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 91 | 
| Conread position: | 23-353 | 
| Cow position: | chr6:44906063-44905734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 39, 246 | 
| Conread position: | 26-401 | 
| Cow position: | chr6:50571862-50571477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 308 | 
| Conread position: | 29-401 | 
| Cow position: | chr6:35416314-35416687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 93 | 
| Conread position: | 37-401 | 
| Cow position: | chr6:20552581-20552956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 181 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:18962746-18963051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 55, 79 | 
| Conread position: | 52-401 | 
| Cow position: | chr6:3987409-3987770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 284 | 
| Conread position: | 56-401 | 
| Cow position: | chr6:17387161-17386809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 275 | 
| Conread position: | 60-401 | 
| Cow position: | chr6:48882377-48882033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 236 | 
| Conread position: | 64-399 | 
| Cow position: | chr6:57857400-57857058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 267 | 
| Conread position: | 65-401 | 
| Cow position: | chr6:2186153-2186496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 266 | 
| Conread position: | 65-401 | 
| Cow position: | chr6:27859085-27858753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 100 | 
| Conread position: | 67-392 | 
| Cow position: | chr6:39957698-39957361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 37, 269 | 
| Conread position: | 67-401 | 
| Cow position: | chr6:49391711-49392055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 266 | 
| Conread position: | 76-344 | 
| Cow position: | chr6:54491322-54491592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 7 | 
| Conread position: | 82-401 | 
| Cow position: | chr6:1401952-1402273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 151 | 
| Conread position: | 82-401 | 
| Cow position: | chr6:31912565-31912889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 163, 5 | 
| Conread position: | 83-401 | 
| Cow position: | chr6:10681594-10681270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 150 | 
| Conread position: | 84-363 | 
| Cow position: | chr6:18969581-18969853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 135 | 
| Conread position: | 84-403 | 
| Cow position: | chr6:42761065-42761389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 241 | 
| Conread position: | 85-365 | 
| Cow position: | chr6:43393503-43393223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 77 | 
| Conread position: | 85-366 | 
| Cow position: | chr6:2545799-2545514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 152 | 
| Conread position: | 90-399 | 
| Cow position: | chr6:41677531-41677217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 20, 14 | 
| Conread position: | 93-321 | 
| Cow position: | chr6:65943492-65943258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 94-398 | 
| Cow position: | chr6:38439192-38438895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 151, 9 | 
| Conread position: | 99-386 | 
| Cow position: | chr6:49442539-49442243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 140 | 
| Conread position: | 99-401 | 
| Cow position: | chr6:3016703-3016398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 5, 87 | 
| Conread position: | 102-401 | 
| Cow position: | chr6:56451513-56451809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 122 | 
| Conread position: | 103-401 | 
| Cow position: | chr6:25408114-25408408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 79 | 
| Conread position: | 103-401 | 
| Cow position: | chr6:52697181-52696870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 237 | 
| Conread position: | 111-358 | 
| Cow position: | chr6:63599228-63598980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 28, 77 | 
| Conread position: | 111-401 | 
| Cow position: | chr6:18987686-18987416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 237, 82 | 
| Conread position: | 112-401 | 
| Cow position: | chr6:8382520-8382225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 218 | 
| Conread position: | 122-310 | 
| Cow position: | chr6:52498281-52498088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 96, 111 | 
| Conread position: | 122-401 | 
| Cow position: | chr6:8633768-8634028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 147, 45 | 
| Conread position: | 124-399 | 
| Cow position: | chr6:727074-727337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 126-401 | 
| Cow position: | chr6:39998893-39999173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 93 | 
| Conread position: | 127-401 | 
| Cow position: | chr6:48872761-48873038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 43 | 
| Conread position: | 132-401 | 
| Cow position: | chr6:43779251-43778981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 60 | 
| Conread position: | 135-392 | 
| Cow position: | chr6:58594848-58595114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 68, 198 | 
| Conread position: | 137-345 | 
| Cow position: | chr6:56441919-56442133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 21, 184 | 
| Conread position: | 137-359 | 
| Cow position: | chr6:39997529-39997757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 121, 114 | 
| Conread position: | 137-367 | 
| Cow position: | chr6:55041615-55041847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 132, 113 | 
| Conread position: | 137-379 | 
| Cow position: | chr6:67213930-67213684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 110, 95 | 
| Conread position: | 137-397 | 
| Cow position: | chr6:65819026-65819292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 187 | 
| Conread position: | 137-399 | 
| Cow position: | chr6:11638652-11638918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 113, 25 | 
| Conread position: | 137-401 | 
| Cow position: | chr6:1537250-1536991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 118, 33 | 
| Conread position: | 137-401 | 
| Cow position: | chr6:6601354-6601620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 192 | 
| Conread position: | 137-401 | 
| Cow position: | chr6:28102316-28102583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 26, 176 | 
| Conread position: | 137-401 | 
| Cow position: | chr6:40863480-40863746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 110, 72 | 
| Conread position: | 137-401 | 
| Cow position: | chr6:43187669-43187395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 26, 197 | 
| Conread position: | 137-401 | 
| Cow position: | chr6:56926289-56926019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 107, 187 | 
| Conread position: | 137-401 | 
| Cow position: | chr6:60332901-60332629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 194 | 
| Conread position: | 137-401 | 
| Cow position: | chr6:64719871-64719604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 99 | 
| Conread position: | 138-401 | 
| Cow position: | chr6:21856820-21857086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 117, 183 | 
| Conread position: | 138-401 | 
| Cow position: | chr6:31941422-31941153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 192 | 
| Conread position: | 139-377 | 
| Cow position: | chr6:12629505-12629264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 7, 98 | 
| Conread position: | 139-400 | 
| Cow position: | chr6:19441743-19441496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 209, 67 | 
| Conread position: | 141-401 | 
| Cow position: | chr6:17149629-17149881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 127, 13 | 
| Conread position: | 141-418 | 
| Cow position: | chr6:68047371-68047649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 104, 69 | 
| Conread position: | 148-401 | 
| Cow position: | chr6:47025595-47025339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 105, 7 | 
| Conread position: | 150-331 | 
| Cow position: | chr6:27150641-27150826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 95, 174 | 
| Conread position: | 150-345 | 
| Cow position: | chr6:917597-917402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 119, 99 | 
| Conread position: | 150-401 | 
| Cow position: | chr6:5096272-5096523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 101, 68 | 
| Conread position: | 151-397 | 
| Cow position: | chr6:28549496-28549745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 95, 81 | 
| Conread position: | 152-401 | 
| Cow position: | chr6:16703218-16703452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 13, 80 | 
| Conread position: | 153-401 | 
| Cow position: | chr6:32287094-32286837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 174 | 
| Conread position: | 154-395 | 
| Cow position: | chr6:21588521-21588276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 91, 38 | 
| Conread position: | 157-402 | 
| Cow position: | chr6:65874752-65874999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 113, 92 | 
| Conread position: | 158-399 | 
| Cow position: | chr6:25782880-25783126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 54, 7 | 
| Conread position: | 158-400 | 
| Cow position: | chr6:32269724-32269962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 110, 10 | 
| Conread position: | 159-401 | 
| Cow position: | chr6:32018570-32018829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 110, 163 | 
| Conread position: | 164-401 | 
| Cow position: | chr6:55474842-55474592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 59, 173 | 
| Conread position: | 165-393 | 
| Cow position: | chr6:25373857-25374089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 90, 159 | 
| Conread position: | 170-383 | 
| Cow position: | chr6:25822674-25822886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 101, 81 | 
| Conread position: | 174-398 | 
| Cow position: | chr6:1498720-1498487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 175-399 | 
| Cow position: | chr6:20267799-20268026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 80, 27 | 
| Conread position: | 180-409 | 
| Cow position: | chr6:27869721-27869485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 11, 154 | 
| Conread position: | 185-393 | 
| Cow position: | chr6:10602523-10602741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 39, 82 | 
| Conread position: | 185-401 | 
| Cow position: | chr6:7105022-7105246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 43, 149 | 
| Conread position: | 185-401 | 
| Cow position: | chr6:34236583-34236809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 61, 118 | 
| Conread position: | 189-393 | 
| Cow position: | chr6:2618061-2618272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 50, 111 | 
| Conread position: | 191-401 | 
| Cow position: | chr6:508019-508236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 54, 139 | 
| Conread position: | 196-399 | 
| Cow position: | chr6:10612322-10612120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 59, 72 | 
| Conread position: | 204-393 | 
| Cow position: | chr6:4903512-4903709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 41, 120 | 
| Conread position: | 204-401 | 
| Cow position: | chr6:54887104-54887306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 40, 120 | 
| Conread position: | 213-401 | 
| Cow position: | chr6:32664621-32664816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 32, 112 | 
| Conread position: | 220-401 | 
| Cow position: | chr6:653325-653511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 25, 12 | 
| Conread position: | 220-401 | 
| Cow position: | chr6:6034328-6034512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 30, 12 | 
| Conread position: | 228-401 | 
| Cow position: | chr6:34843251-34843427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 20, 99 | 
| Conread position: | 229-400 | 
| Cow position: | chr6:59603360-59603538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 8, 23 | 
| Conread position: | 232-401 | 
| Cow position: | chr6:6557422-6557247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 13, 98 | 
| Conread position: | 232-401 | 
| Cow position: | chr6:27887364-27887198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 121, 21 | 
| Conread position: | 233-401 | 
| Cow position: | chr6:16766384-16766556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 36, 89 | 
| Conread position: | 233-401 | 
| Cow position: | chr6:50114132-50113965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 20, 39 | 
| Conread position: | 236-401 | 
| Cow position: | chr6:59619529-59619362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 14, 26 | 
| Conread position: | 237-401 | 
| Cow position: | chr6:3574240-3574072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 32, 91 | 
| Conread position: | 240-401 | 
| Cow position: | chr6:67448475-67448640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 31, 88 | 
| Conread position: | 243-401 | 
| Cow position: | chr6:17773434-17773272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 28, 85 | 
| Conread position: | 267-397 | 
| Cow position: | chr6:65049265-65049396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 77, 52 | 
| Conread position: | 267-401 | 
| Cow position: | chr6:1109429-1109294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 80, 52 | 
| Conread position: | 267-402 | 
| Cow position: | chr6:17556252-17556388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 82, 58 | 
| Conread position: | 268-399 | 
| Cow position: | chr6:33508666-33508528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 79, 48 | 
| Conread position: | 269-401 | 
| Cow position: | chr6:43621150-43621017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 85, 56 | 
| Conread position: | 269-401 | 
| Cow position: | chr6:52065702-52065835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 85, 56 | 
| Conread position: | 269-401 | 
| Cow position: | chr6:61829648-61829515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 85, 56 | 
| Conread position: | 274-401 | 
| Cow position: | chr6:49761877-49761750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 80, 19 | 
| Conread position: | 291-401 | 
| Cow position: | chr6:53935241-53935352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 56, 34 | 
| Conread position: | 305-401 | 
| Cow position: | chr6:61632516-61632419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 99 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 43, 20 | 
Show alignments to all cow chromosomes.
