Cow genome map

Conread name: ruio19_k16.y1

Conread position: 1-318
Cow position: chr9:25214156-25213841 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 226
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 55, 39

Conread position: 1-324
Cow position: chr9:42172342-42172018 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 203

Conread position: 1-334
Cow position: chr9:26478078-26478418 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 326

Conread position: 1-339
Cow position: chr9:37068478-37068138 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 144

Conread position: 1-345
Cow position: chr9:9415822-9415474 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 273

Conread position: 1-345
Cow position: chr9:52753596-52753948 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 327

Conread position: 1-355
Cow position: chr9:59507594-59507958 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 73

Conread position: 1-360
Cow position: chr9:18381379-18381751 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 332

Conread position: 1-367
Cow position: chr9:12194833-12195208 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 169

Conread position: 1-369
Cow position: chr9:13186204-13185843 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 139

Conread position: 1-374
Cow position: chr9:20321256-20320876 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 241

Conread position: 1-378
Cow position: chr9:28726206-28725837 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 25

Conread position: 1-381
Cow position: chr9:59541051-59540670 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 251

Conread position: 1-388
Cow position: chr9:51011133-51010781 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 25

Conread position: 1-389
Cow position: chr9:371609-372010 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 271
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 20

Conread position: 1-389
Cow position: chr9:27314363-27313972 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 321

Conread position: 1-389
Cow position: chr9:31078541-31078139 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 1-389
Cow position: chr9:44920890-44920486 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 26

Conread position: 1-392
Cow position: chr9:19079476-19079088 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 22

Conread position: 1-393
Cow position: chr9:24996976-24996584 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 250

Conread position: 1-394
Cow position: chr9:24428089-24427698 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 73

Conread position: 1-395
Cow position: chr9:35592513-35592920 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 138

Conread position: 1-395
Cow position: chr9:64055058-64054667 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 36

Conread position: 1-397
Cow position: chr9:4861953-4862362 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 39

Conread position: 1-397
Cow position: chr9:33659004-33659401 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 112

Conread position: 1-397
Cow position: chr9:37193809-37194204 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 266

Conread position: 1-398
Cow position: chr9:5058477-5058862 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 20

Conread position: 1-398
Cow position: chr9:20318063-20317641 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 202

Conread position: 1-398
Cow position: chr9:47045572-47045165 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 327

Conread position: 1-398
Cow position: chr9:55032127-55031722 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 177

Conread position: 1-399
Cow position: chr9:1983983-1983588 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 215

Conread position: 1-399
Cow position: chr9:21228839-21228439 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 77

Conread position: 1-399
Cow position: chr9:30736880-30737298 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 37

Conread position: 1-399
Cow position: chr9:62400689-62401105 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 27

Conread position: 1-400
Cow position: chr9:10857656-10857249 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 158

Conread position: 1-400
Cow position: chr9:13181534-13181130 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 337

Conread position: 1-401
Cow position: chr9:39975-40380 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 55, 20

Conread position: 1-401
Cow position: chr9:1062071-1062481 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr9:1405416-1405022 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 207

Conread position: 1-401
Cow position: chr9:1520206-1519801 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 307

Conread position: 1-401
Cow position: chr9:1990929-1991339 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr9:3756223-3756624 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 105

Conread position: 1-401
Cow position: chr9:5007590-5007188 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 324

Conread position: 1-401
Cow position: chr9:5327742-5328152 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 8

Conread position: 1-401
Cow position: chr9:5839518-5839919 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 65

Conread position: 1-401
Cow position: chr9:5886774-5887174 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 273

Conread position: 1-401
Cow position: chr9:6253189-6252779 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr9:6764146-6764554 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 175

Conread position: 1-401
Cow position: chr9:7006364-7005956 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 159

Conread position: 1-401
Cow position: chr9:7058430-7058836 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 173

Conread position: 1-401
Cow position: chr9:8951431-8951835 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 25

Conread position: 1-401
Cow position: chr9:9016696-9016289 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 11

Conread position: 1-401
Cow position: chr9:9443075-9442665 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr9:9957567-9957969 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 270

Conread position: 1-401
Cow position: chr9:10326858-10326448 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr9:12162224-12161805 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 304

Conread position: 1-401
Cow position: chr9:12285082-12285493 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 334

Conread position: 1-401
Cow position: chr9:13471967-13472360 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 88

Conread position: 1-401
Cow position: chr9:14046287-14045880 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 144

Conread position: 1-401
Cow position: chr9:16179209-16178799 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr9:17634113-17633702 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 334

Conread position: 1-401
Cow position: chr9:19155660-19156077 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 340

Conread position: 1-401
Cow position: chr9:20900592-20900189 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 106

Conread position: 1-401
Cow position: chr9:20942102-20941693 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 332

Conread position: 1-401
Cow position: chr9:21412926-21412512 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 138

Conread position: 1-401
Cow position: chr9:22361536-22361936 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 200

Conread position: 1-401
Cow position: chr9:22443092-22442695 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 235

Conread position: 1-401
Cow position: chr9:22656423-22656013 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 333

Conread position: 1-401
Cow position: chr9:22755314-22755709 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 22

Conread position: 1-401
Cow position: chr9:22803037-22803436 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 61

Conread position: 1-401
Cow position: chr9:23028416-23028815 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 39

Conread position: 1-401
Cow position: chr9:24917664-24918073 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 88

Conread position: 1-401
Cow position: chr9:26087386-26087788 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 174

Conread position: 1-401
Cow position: chr9:27038738-27038328 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 333

Conread position: 1-401
Cow position: chr9:28025445-28025034 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 327

Conread position: 1-401
Cow position: chr9:28773641-28774052 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 140

Conread position: 1-401
Cow position: chr9:29192949-29193355 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 213

Conread position: 1-401
Cow position: chr9:29338513-29338122 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 67

Conread position: 1-401
Cow position: chr9:31811202-31810792 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr9:34059009-34059419 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 35

Conread position: 1-401
Cow position: chr9:34568262-34567861 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 136

Conread position: 1-401
Cow position: chr9:34918230-34917832 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 133

Conread position: 1-401
Cow position: chr9:36844321-36844725 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 31

Conread position: 1-401
Cow position: chr9:37157987-37158397 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr9:38634403-38633994 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 13

Conread position: 1-401
Cow position: chr9:40142735-40143136 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 73

Conread position: 1-401
Cow position: chr9:40316747-40316351 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 39

Conread position: 1-401
Cow position: chr9:42570840-42570430 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 333

Conread position: 1-401
Cow position: chr9:42868247-42868657 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 333

Conread position: 1-401
Cow position: chr9:43670464-43670069 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 112

Conread position: 1-401
Cow position: chr9:47263658-47263254 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 145

Conread position: 1-401
Cow position: chr9:51178028-51178454 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 349

Conread position: 1-401
Cow position: chr9:51556594-51556182 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 237

Conread position: 1-401
Cow position: chr9:52001481-52001895 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 31

Conread position: 1-401
Cow position: chr9:52294104-52293691 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 284
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 66, 139

Conread position: 1-401
Cow position: chr9:54996248-54995850 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 179

Conread position: 1-401
Cow position: chr9:59454274-59454682 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 331

Conread position: 1-401
Cow position: chr9:59479233-59479642 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 89

Conread position: 1-401
Cow position: chr9:62668927-62669339 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 329

Conread position: 1-402
Cow position: chr9:4647037-4647429 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 171

Conread position: 1-402
Cow position: chr9:58674278-58674694 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 339

Conread position: 2-320
Cow position: chr9:56530788-56531115 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 2-330
Cow position: chr9:34016031-34015697 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 2-340
Cow position: chr9:15670475-15670129 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-342
Cow position: chr9:29082943-29083290 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 325

Conread position: 2-345
Cow position: chr9:2394001-2394352 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 326

Conread position: 2-345
Cow position: chr9:10643314-10643673 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 334

Conread position: 2-345
Cow position: chr9:31361549-31361900 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-382
Cow position: chr9:59197471-59197084 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 323

Conread position: 2-383
Cow position: chr9:3997149-3997537 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 243

Conread position: 2-383
Cow position: chr9:64562810-64562436 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 9

Conread position: 2-393
Cow position: chr9:42696592-42696195 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 208

Conread position: 2-394
Cow position: chr9:9093690-9094092 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-396
Cow position: chr9:3717987-3717583 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 292

Conread position: 2-397
Cow position: chr9:2223265-2222883 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 262
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 35

Conread position: 2-397
Cow position: chr9:17018378-17017973 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-398
Cow position: chr9:6365996-6365594 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 221

Conread position: 2-399
Cow position: chr9:4673679-4673272 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 89

Conread position: 2-399
Cow position: chr9:18711116-18710709 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 326

Conread position: 2-399
Cow position: chr9:19546142-19545727 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 340

Conread position: 2-399
Cow position: chr9:27781288-27781695 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 332

Conread position: 2-399
Cow position: chr9:50900026-50900419 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 143

Conread position: 2-400
Cow position: chr9:777187-777595 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-400
Cow position: chr9:11477636-11478042 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 326

Conread position: 2-401
Cow position: chr9:174151-174558 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 238

Conread position: 2-401
Cow position: chr9:216387-216796 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:771625-772033 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 199

Conread position: 2-401
Cow position: chr9:874277-873867 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 2-401
Cow position: chr9:1070660-1071069 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:1100208-1099809 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 129

Conread position: 2-401
Cow position: chr9:1306726-1307137 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 337

Conread position: 2-401
Cow position: chr9:1838575-1838166 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 2-401
Cow position: chr9:1997655-1998085 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 348

Conread position: 2-401
Cow position: chr9:2548072-2548480 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 7

Conread position: 2-401
Cow position: chr9:2682112-2681703 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:2834378-2834785 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 2-401
Cow position: chr9:2857467-2857058 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 292

Conread position: 2-401
Cow position: chr9:3052888-3052480 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 222

Conread position: 2-401
Cow position: chr9:3062211-3061801 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr9:3075760-3075354 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 192

Conread position: 2-401
Cow position: chr9:4939870-4940284 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 295

Conread position: 2-401
Cow position: chr9:5030311-5030716 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 235

Conread position: 2-401
Cow position: chr9:5452016-5452425 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:7103607-7104016 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr9:7830271-7830688 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 337

Conread position: 2-401
Cow position: chr9:9611263-9611672 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:9634281-9633873 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 164

Conread position: 2-401
Cow position: chr9:10803296-10802888 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 331

Conread position: 2-401
Cow position: chr9:12379069-12378663 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 323

Conread position: 2-401
Cow position: chr9:13620373-13620782 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:15052275-15052674 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 255

Conread position: 2-401
Cow position: chr9:16981448-16981854 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 38

Conread position: 2-401
Cow position: chr9:17060734-17061143 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 335

Conread position: 2-401
Cow position: chr9:18243359-18243768 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 335

Conread position: 2-401
Cow position: chr9:22570727-22570319 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 34

Conread position: 2-401
Cow position: chr9:25701569-25701974 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 305

Conread position: 2-401
Cow position: chr9:26326369-26325961 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:27898650-27898244 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 137

Conread position: 2-401
Cow position: chr9:28785965-28785559 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 331

Conread position: 2-401
Cow position: chr9:30187329-30186921 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:30440009-30439610 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 102

Conread position: 2-401
Cow position: chr9:31416892-31417301 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:33843947-33843538 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 326

Conread position: 2-401
Cow position: chr9:34238131-34238544 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 330

Conread position: 2-401
Cow position: chr9:34689910-34690315 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 297

Conread position: 2-401
Cow position: chr9:35564915-35565324 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:36829428-36829837 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 332

Conread position: 2-401
Cow position: chr9:37173781-37174190 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 332

Conread position: 2-401
Cow position: chr9:37254028-37253619 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:37908472-37908062 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 333

Conread position: 2-401
Cow position: chr9:39302929-39303338 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:42052912-42053315 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 98

Conread position: 2-401
Cow position: chr9:42475463-42475868 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 221

Conread position: 2-401
Cow position: chr9:43494672-43494263 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:44202456-44202865 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr9:45383847-45383441 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 323

Conread position: 2-401
Cow position: chr9:46627934-46627526 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 142

Conread position: 2-401
Cow position: chr9:46667160-46667583 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 7

Conread position: 2-401
Cow position: chr9:47171677-47171268 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr9:48794672-48795077 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 57

Conread position: 2-401
Cow position: chr9:49258885-49259292 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 47

Conread position: 2-401
Cow position: chr9:50327325-50326911 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 337

Conread position: 2-401
Cow position: chr9:50841070-50840647 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 340

Conread position: 2-401
Cow position: chr9:54413007-54413394 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 43

Conread position: 2-401
Cow position: chr9:56177498-56177089 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 326

Conread position: 2-401
Cow position: chr9:59495560-59495968 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 172

Conread position: 2-401
Cow position: chr9:60410026-60409617 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-401
Cow position: chr9:62817597-62818006 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 332

Conread position: 2-452
Cow position: chr9:3311910-3311463 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 333

Conread position: 3-392
Cow position: chr9:34945403-34945790 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 37

Conread position: 3-399
Cow position: chr9:18072103-18071698 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 233

Conread position: 3-399
Cow position: chr9:18205682-18205291 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 328

Conread position: 3-400
Cow position: chr9:2495119-2495525 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 24

Conread position: 3-401
Cow position: chr9:3807215-3806809 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 105

Conread position: 3-401
Cow position: chr9:5431089-5430681 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 331

Conread position: 3-401
Cow position: chr9:5628441-5628034 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 233

Conread position: 3-401
Cow position: chr9:16639897-16639489 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 331

Conread position: 3-401
Cow position: chr9:18506206-18506609 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 269

Conread position: 3-401
Cow position: chr9:30401891-30401497 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 3-401
Cow position: chr9:46524590-46525004 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 284
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 63, 112

Conread position: 3-401
Cow position: chr9:46670542-46670146 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 7

Conread position: 3-402
Cow position: chr9:28821828-28822231 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 226

Conread position: 4-393
Cow position: chr9:30021318-30020925 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 120

Conread position: 4-400
Cow position: chr9:45877140-45876734 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 330

Conread position: 4-401
Cow position: chr9:59432123-59431714 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 259

Conread position: 4-401
Cow position: chr9:64011608-64012014 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 232

Conread position: 5-369
Cow position: chr9:10004263-10004633 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 114

Conread position: 5-401
Cow position: chr9:3932491-3932898 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 76

Conread position: 6-369
Cow position: chr9:30804010-30803646 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 127

Conread position: 6-399
Cow position: chr9:20988913-20988512 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 31

Conread position: 6-401
Cow position: chr9:23422215-23421801 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 334

Conread position: 8-314
Cow position: chr9:26064741-26064428 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 142

Conread position: 8-401
Cow position: chr9:56861563-56861954 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 8-401
Cow position: chr9:58747205-58747605 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 148

Conread position: 9-401
Cow position: chr9:3411283-3411680 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 165

Conread position: 11-401
Cow position: chr9:43301989-43302386 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 314

Conread position: 12-388
Cow position: chr9:5533321-5533710 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 307

Conread position: 18-397
Cow position: chr9:35624922-35624533 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 310

Conread position: 26-353
Cow position: chr9:9985153-9985500 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 227

Conread position: 28-399
Cow position: chr9:4553392-4553013 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 162

Conread position: 29-401
Cow position: chr9:61846109-61845720 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 29

Conread position: 35-401
Cow position: chr9:24424113-24423737 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 293

Conread position: 42-288
Cow position: chr9:12461753-12461508 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 36

Conread position: 42-360
Cow position: chr9:9752317-9752005 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 15

Conread position: 42-401
Cow position: chr9:43496718-43496349 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 292

Conread position: 45-401
Cow position: chr9:23859115-23859463 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 155

Conread position: 55-399
Cow position: chr9:51692060-51692403 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 104

Conread position: 55-402
Cow position: chr9:50689468-50689113 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 57

Conread position: 56-367
Cow position: chr9:7844122-7844440 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 19, 102

Conread position: 56-401
Cow position: chr9:33067927-33068286 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 278

Conread position: 57-401
Cow position: chr9:1938478-1938820 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 231

Conread position: 59-401
Cow position: chr9:28703012-28702664 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 61-401
Cow position: chr9:6707356-6707703 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 270

Conread position: 62-401
Cow position: chr9:47006294-47005948 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 262

Conread position: 65-401
Cow position: chr9:29106433-29106090 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 266

Conread position: 72-377
Cow position: chr9:2618234-2618546 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 253

Conread position: 74-398
Cow position: chr9:20959344-20959013 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 64

Conread position: 80-401
Cow position: chr9:49073524-49073848 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 42

Conread position: 82-345
Cow position: chr9:15842665-15842406 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 22, 114

Conread position: 82-398
Cow position: chr9:20578300-20577978 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 169

Conread position: 82-400
Cow position: chr9:2527817-2527496 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 249

Conread position: 82-400
Cow position: chr9:13493270-13492961 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 101

Conread position: 82-401
Cow position: chr9:30139073-30139401 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 97

Conread position: 82-401
Cow position: chr9:53603166-53603490 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 197

Conread position: 83-401
Cow position: chr9:17307347-17307023 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 255

Conread position: 83-401
Cow position: chr9:25974449-25974769 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 222
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 161

Conread position: 83-401
Cow position: chr9:49982037-49981716 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 243

Conread position: 84-367
Cow position: chr9:27107041-27107330 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 83

Conread position: 84-401
Cow position: chr9:33999771-33999446 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 104

Conread position: 85-401
Cow position: chr9:34675870-34676198 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 19, 243

Conread position: 88-389
Cow position: chr9:18831267-18830959 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 237

Conread position: 90-401
Cow position: chr9:9491419-9491736 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 17

Conread position: 102-401
Cow position: chr9:63563939-63563635 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 52

Conread position: 105-401
Cow position: chr9:58133078-58133388 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 233

Conread position: 106-399
Cow position: chr9:21461970-21461679 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 96

Conread position: 107-392
Cow position: chr9:6328899-6329184 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 96, 26

Conread position: 108-366
Cow position: chr9:5524846-5525115 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 67

Conread position: 115-389
Cow position: chr9:5608275-5608540 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 146, 18

Conread position: 125-401
Cow position: chr9:59539398-59539124 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 208
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 120, 107

Conread position: 127-401
Cow position: chr9:8281779-8282055 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 129, 43

Conread position: 132-387
Cow position: chr9:10634405-10634143 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 194

Conread position: 135-401
Cow position: chr9:5414567-5414836 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 202
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 110, 47

Conread position: 135-401
Cow position: chr9:15982188-15981917 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 19

Conread position: 135-402
Cow position: chr9:18008086-18007811 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 197
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 106, 0

Conread position: 137-394
Cow position: chr9:21841092-21841357 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 86, 189

Conread position: 137-399
Cow position: chr9:26055515-26055246 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 32

Conread position: 137-401
Cow position: chr9:4305595-4305871 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 190

Conread position: 137-401
Cow position: chr9:9817770-9818038 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 46

Conread position: 137-401
Cow position: chr9:17302495-17302763 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 187

Conread position: 137-401
Cow position: chr9:28657572-28657842 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 187

Conread position: 137-401
Cow position: chr9:62075207-62074946 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 210, 119

Conread position: 138-401
Cow position: chr9:25547656-25547939 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 109, 206

Conread position: 139-392
Cow position: chr9:5517658-5517403 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 111, 40

Conread position: 139-397
Cow position: chr9:4127486-4127737 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 195
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 142, 92

Conread position: 139-399
Cow position: chr9:49151147-49151407 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 132, 23

Conread position: 139-403
Cow position: chr9:11410681-11410415 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 107, 79

Conread position: 144-394
Cow position: chr9:32985847-32985593 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 103, 186

Conread position: 148-401
Cow position: chr9:26124192-26123929 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 52, 187

Conread position: 149-401
Cow position: chr9:1850188-1850437 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 183
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 198, 24

Conread position: 149-401
Cow position: chr9:54459029-54459287 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 91, 181

Conread position: 150-397
Cow position: chr9:8601436-8601670 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 53, 110

Conread position: 152-401
Cow position: chr9:59761103-59760850 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 79, 24

Conread position: 154-401
Cow position: chr9:1740092-1740344 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 91, 175

Conread position: 158-399
Cow position: chr9:62763842-62764089 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 29, 150

Conread position: 159-399
Cow position: chr9:2873938-2873691 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 86, 165

Conread position: 172-401
Cow position: chr9:13220992-13220752 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 50, 0

Conread position: 173-401
Cow position: chr9:29300582-29300805 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 174, 63

Conread position: 175-401
Cow position: chr9:13187651-13187419 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 176
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 70, 155

Conread position: 185-383
Cow position: chr9:49220830-49221034 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 139

Conread position: 185-400
Cow position: chr9:55796657-55796890 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 151

Conread position: 185-401
Cow position: chr9:20409800-20409583 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 64

Conread position: 185-401
Cow position: chr9:52526588-52526366 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 60, 145

Conread position: 187-391
Cow position: chr9:9623365-9623159 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 38

Conread position: 187-401
Cow position: chr9:41312606-41312826 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 137

Conread position: 190-401
Cow position: chr9:10678504-10678715 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 32

Conread position: 195-399
Cow position: chr9:2173960-2173752 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 135

Conread position: 199-399
Cow position: chr9:2596739-2596537 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 99

Conread position: 201-401
Cow position: chr9:24873537-24873740 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 34, 7

Conread position: 204-387
Cow position: chr9:44623953-44624139 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 29

Conread position: 208-401
Cow position: chr9:55758856-55758657 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 37, 122

Conread position: 218-401
Cow position: chr9:17992955-17993139 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 130, 107

Conread position: 224-401
Cow position: chr9:17870899-17870721 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 26

Conread position: 224-401
Cow position: chr9:45792246-45792063 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 106

Conread position: 225-399
Cow position: chr9:52407925-52408107 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 101

Conread position: 225-399
Cow position: chr9:54997266-54997090 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 49, 16

Conread position: 225-401
Cow position: chr9:33057176-33056997 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 16

Conread position: 232-401
Cow position: chr9:36622109-36621936 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 100

Conread position: 234-401
Cow position: chr9:1856462-1856634 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 86

Conread position: 236-401
Cow position: chr9:27443093-27443263 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 20, 93

Conread position: 243-382
Cow position: chr9:9357520-9357377 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 79

Conread position: 243-401
Cow position: chr9:9210520-9210358 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 85

Conread position: 264-396
Cow position: chr9:5314435-5314300 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 267-391
Cow position: chr9:28356075-28356199 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 41

Conread position: 267-401
Cow position: chr9:17987413-17987548 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 80, 58

Conread position: 269-401
Cow position: chr9:44821232-44821099 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 79, 56

Conread position: 394-489
Cow position: chr9:6191978-6192074 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 81
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 401-493
Cow position: chr9:17740469-17740562 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 82
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 0

Show alignments to all cow chromosomes.