Cow genome map
| Conread name: | ruio19_n10.y1 |
| Conread position: | 1-138 |
| Cow position: | chr11:35109491-35109366 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-139 |
| Cow position: | chr11:60720409-60720279 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 1-144 |
| Cow position: | chr11:33369197-33369332 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-147 |
| Cow position: | chr11:18508984-18508845 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 131, 46 |
| Conread position: | 1-147 |
| Cow position: | chr11:25376546-25376695 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-147 |
| Cow position: | chr11:35351994-35351850 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 83, 45 |
| Conread position: | 1-147 |
| Cow position: | chr11:36300535-36300401 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-147 |
| Cow position: | chr11:45277105-45276965 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-147 |
| Cow position: | chr11:60296776-60296921 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 85, 52 |
| Conread position: | 1-149 |
| Cow position: | chr11:41215779-41215918 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-150 |
| Cow position: | chr11:3740000-3740150 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 1-150 |
| Cow position: | chr11:53816899-53817041 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 1-150 |
| Cow position: | chr11:68913187-68913329 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-150 |
| Cow position: | chr11:69307560-69307716 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 127 |
| Conread position: | 1-150 |
| Cow position: | chr11:80596384-80596542 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-155 |
| Cow position: | chr11:17517445-17517590 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-155 |
| Cow position: | chr11:49486825-49486980 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 1-156 |
| Cow position: | chr11:26823156-26823304 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-156 |
| Cow position: | chr11:43914338-43914484 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-158 |
| Cow position: | chr11:13864058-13863906 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 46 |
| Conread position: | 1-158 |
| Cow position: | chr11:25783759-25783909 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 1-158 |
| Cow position: | chr11:42084629-42084478 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 147, 45 |
| Conread position: | 1-158 |
| Cow position: | chr11:51683262-51683410 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-158 |
| Cow position: | chr11:70600782-70600633 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-159 |
| Cow position: | chr11:1980221-1980070 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-159 |
| Cow position: | chr11:4436794-4436960 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 77 |
| Conread position: | 1-159 |
| Cow position: | chr11:6245361-6245517 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 143, 52 |
| Conread position: | 1-159 |
| Cow position: | chr11:25614767-25614608 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 1-159 |
| Cow position: | chr11:46747814-46747664 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-159 |
| Cow position: | chr11:75479977-75479828 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-160 |
| Cow position: | chr11:71455867-71456026 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 90, 52 |
| Conread position: | 1-161 |
| Cow position: | chr11:70709834-70710009 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-163 |
| Cow position: | chr11:2084190-2084345 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 145, 52 |
| Conread position: | 1-163 |
| Cow position: | chr11:25968808-25968654 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-163 |
| Cow position: | chr11:36917730-36917566 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 1-163 |
| Cow position: | chr11:67345617-67345460 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 1-164 |
| Cow position: | chr11:70483805-70483651 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 1-165 |
| Cow position: | chr11:63849905-63849749 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-165 |
| Cow position: | chr11:66939546-66939389 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 150, 45 |
| Conread position: | 1-166 |
| Cow position: | chr11:33271477-33271631 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-166 |
| Cow position: | chr11:36520926-36521083 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 1-166 |
| Cow position: | chr11:41278232-41278390 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 1-167 |
| Cow position: | chr11:25603994-25604156 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 1-168 |
| Cow position: | chr11:13592782-13592946 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 1-168 |
| Cow position: | chr11:13940232-13940390 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-168 |
| Cow position: | chr11:15772667-15772510 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 97, 45 |
| Conread position: | 1-168 |
| Cow position: | chr11:19591948-19591793 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-168 |
| Cow position: | chr11:41213096-41213255 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 1-168 |
| Cow position: | chr11:44176642-44176795 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-168 |
| Cow position: | chr11:79666215-79666058 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-169 |
| Cow position: | chr11:36361596-36361434 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 146, 45 |
| Conread position: | 1-169 |
| Cow position: | chr11:75246394-75246579 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-170 |
| Cow position: | chr11:8670058-8670220 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 1-170 |
| Cow position: | chr11:16314919-16315080 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-170 |
| Cow position: | chr11:21830163-21830003 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 147, 54 |
| Conread position: | 1-170 |
| Cow position: | chr11:83028040-83028198 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-171 |
| Cow position: | chr11:48650019-48650192 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 54 |
| Conread position: | 1-171 |
| Cow position: | chr11:68570334-68570174 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-172 |
| Cow position: | chr11:62102401-62102237 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 156, 52 |
| Conread position: | 1-173 |
| Cow position: | chr11:69035205-69035372 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 1-174 |
| Cow position: | chr11:59024314-59024144 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 97, 52 |
| Conread position: | 1-175 |
| Cow position: | chr11:12079883-12080055 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 59 |
| Conread position: | 1-175 |
| Cow position: | chr11:47314386-47314214 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 1-176 |
| Cow position: | chr11:21590432-21590600 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 1-176 |
| Cow position: | chr11:27913331-27913497 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-176 |
| Cow position: | chr11:87172030-87171863 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 168, 52 |
| Conread position: | 1-177 |
| Cow position: | chr11:25620344-25620176 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 143, 45 |
| Conread position: | 1-178 |
| Cow position: | chr11:15369434-15369604 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 1-179 |
| Cow position: | chr11:83042197-83042024 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 54 |
| Conread position: | 1-181 |
| Cow position: | chr11:23279111-23278936 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 67 |
| Conread position: | 2-147 |
| Cow position: | chr11:69417449-69417586 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-157 |
| Cow position: | chr11:38657136-38656989 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-163 |
| Cow position: | chr11:1265496-1265343 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2-164 |
| Cow position: | chr11:8828053-8828207 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 2-166 |
| Cow position: | chr11:21124563-21124406 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 146, 44 |
| Conread position: | 3-158 |
| Cow position: | chr11:68592066-68592213 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-162 |
| Cow position: | chr11:37100124-37099972 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 148, 51 |
| Conread position: | 3-169 |
| Cow position: | chr11:30165558-30165717 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 142, 55 |
| Conread position: | 3-170 |
| Cow position: | chr11:12555257-12555098 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-170 |
| Cow position: | chr11:46314059-46314220 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 151, 43 |
| Conread position: | 4-145 |
| Cow position: | chr11:21508054-21508192 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 94, 49 |
| Conread position: | 4-157 |
| Cow position: | chr11:18574806-18574661 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 91, 49 |
| Conread position: | 4-163 |
| Cow position: | chr11:24551438-24551590 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 50 |
| Conread position: | 5-147 |
| Cow position: | chr11:79869377-79869527 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 84 |
| Conread position: | 5-175 |
| Cow position: | chr11:32782833-32782667 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 6-147 |
| Cow position: | chr11:53778668-53778803 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 92, 45 |
| Conread position: | 6-149 |
| Cow position: | chr11:30708553-30708690 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 42 |
| Conread position: | 6-163 |
| Cow position: | chr11:4052194-4052043 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 7-154 |
| Cow position: | chr11:34644708-34644847 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 7-163 |
| Cow position: | chr11:64607198-64607045 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 8-148 |
| Cow position: | chr11:11523402-11523257 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 8-163 |
| Cow position: | chr11:57503531-57503679 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 28-146 |
| Cow position: | chr11:30111678-30111794 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 24 |
| Conread position: | 185-422 |
| Cow position: | chr11:27768800-27769033 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 128, 54 |
| Conread position: | 186-403 |
| Cow position: | chr11:53270525-53270304 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 189-422 |
| Cow position: | chr11:34268027-34268257 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 189-422 |
| Cow position: | chr11:40144834-40144604 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 9, 107 |
| Conread position: | 189-433 |
| Cow position: | chr11:45651006-45650766 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 101, 13 |
| Conread position: | 189-433 |
| Cow position: | chr11:54666372-54666125 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 118, 200 |
| Conread position: | 193-422 |
| Cow position: | chr11:18370918-18371150 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 120, 44 |
| Conread position: | 195-422 |
| Cow position: | chr11:56396301-56396066 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 196-395 |
| Cow position: | chr11:3680910-3680708 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 196-398 |
| Cow position: | chr11:48930412-48930218 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 116, 66 |
| Conread position: | 196-399 |
| Cow position: | chr11:12010975-12011178 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 108, 72 |
| Conread position: | 196-418 |
| Cow position: | chr11:25379539-25379312 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 106, 63 |
| Conread position: | 196-419 |
| Cow position: | chr11:44244089-44243869 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 97 |
| Conread position: | 196-422 |
| Cow position: | chr11:43839498-43839717 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 118, 126 |
| Conread position: | 196-422 |
| Cow position: | chr11:50134160-50133930 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 110, 99 |
| Conread position: | 196-422 |
| Cow position: | chr11:64083117-64083339 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 182, 29 |
| Conread position: | 196-422 |
| Cow position: | chr11:74216214-74215983 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 120, 97 |
| Conread position: | 196-423 |
| Cow position: | chr11:27666168-27665930 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 196-433 |
| Cow position: | chr11:28748214-28747969 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 115, 97 |
| Conread position: | 196-433 |
| Cow position: | chr11:29014403-29014645 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 115, 99 |
| Conread position: | 197-380 |
| Cow position: | chr11:32317342-32317159 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 197-422 |
| Cow position: | chr11:16653384-16653172 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 107, 39 |
| Conread position: | 197-422 |
| Cow position: | chr11:86925319-86925092 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 106, 174 |
| Conread position: | 197-433 |
| Cow position: | chr11:43948188-43947961 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 71, 41 |
| Conread position: | 198-432 |
| Cow position: | chr11:9063217-9062983 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 82, 184 |
| Conread position: | 199-419 |
| Cow position: | chr11:21849999-21849780 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 115, 68 |
| Conread position: | 199-420 |
| Cow position: | chr11:60008214-60008443 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 108, 41 |
| Conread position: | 201-426 |
| Cow position: | chr11:21922466-21922697 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 106, 77 |
| Conread position: | 206-418 |
| Cow position: | chr11:11997442-11997646 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 207-423 |
| Cow position: | chr11:31126261-31126481 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 27 |
| Conread position: | 215-403 |
| Cow position: | chr11:21886514-21886322 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 96, 80 |
| Conread position: | 225-410 |
| Cow position: | chr11:45554581-45554397 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 88, 32 |
| Conread position: | 230-439 |
| Cow position: | chr11:12998894-12999114 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 65, 206 |
| Conread position: | 237-423 |
| Cow position: | chr11:26713213-26713020 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 67, 104 |
| Conread position: | 239-419 |
| Cow position: | chr11:42682622-42682435 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 167 |
| Conread position: | 240-476 |
| Cow position: | chr11:81278695-81278930 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 171 |
| Conread position: | 246-394 |
| Cow position: | chr11:49216828-49216981 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 250-440 |
| Cow position: | chr11:58601881-58602070 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 65, 114 |
| Conread position: | 263-422 |
| Cow position: | chr11:45940269-45940101 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.