Cow genome map

Conread name: ruio19_n10.y1

Conread position: 1-142
Cow position: chr14:35381569-35381437 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-144
Cow position: chr14:28924146-28924011 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 1-145
Cow position: chr14:42419295-42419434 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 45

Conread position: 1-147
Cow position: chr14:7271272-7271415 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 72

Conread position: 1-147
Cow position: chr14:22941750-22941897 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 85, 55

Conread position: 1-147
Cow position: chr14:47200146-47200291 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 97, 76

Conread position: 1-148
Cow position: chr14:10078246-10078096 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-149
Cow position: chr14:5556236-5556098 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 1-149
Cow position: chr14:31342190-31342050 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-150
Cow position: chr14:30260746-30260590 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 66, 81

Conread position: 1-150
Cow position: chr14:34775768-34775909 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-154
Cow position: chr14:15518422-15518568 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 145, 51

Conread position: 1-155
Cow position: chr14:18270339-18270195 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-156
Cow position: chr14:38144129-38144276 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 1-157
Cow position: chr14:27044794-27044958 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-157
Cow position: chr14:37436732-37436890 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 46

Conread position: 1-158
Cow position: chr14:8923606-8923754 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 1-158
Cow position: chr14:12036848-12036997 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 1-159
Cow position: chr14:27364558-27364408 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 1-162
Cow position: chr14:15428456-15428306 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 89, 45

Conread position: 1-162
Cow position: chr14:29282733-29282576 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 148, 45

Conread position: 1-162
Cow position: chr14:34586292-34586120 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 1-163
Cow position: chr14:11285558-11285397 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 113, 52

Conread position: 1-163
Cow position: chr14:40230657-40230808 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 1-164
Cow position: chr14:7198476-7198319 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 144, 45

Conread position: 1-164
Cow position: chr14:44713397-44713242 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-164
Cow position: chr14:45955269-45955111 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 51

Conread position: 1-165
Cow position: chr14:37236348-37236198 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 1-168
Cow position: chr14:1708678-1708837 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-169
Cow position: chr14:10920585-10920747 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 67

Conread position: 1-169
Cow position: chr14:13516011-13516170 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-169
Cow position: chr14:18941307-18941468 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 146, 45

Conread position: 1-170
Cow position: chr14:5044649-5044497 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 1-170
Cow position: chr14:12071546-12071711 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 143, 45

Conread position: 1-170
Cow position: chr14:26918978-26918816 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 77

Conread position: 1-172
Cow position: chr14:5668140-5668304 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 147, 45

Conread position: 1-172
Cow position: chr14:8083176-8083014 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 1-172
Cow position: chr14:19988081-19988246 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 152, 45

Conread position: 1-173
Cow position: chr14:33457065-33457228 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 1-173
Cow position: chr14:40952249-40952078 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 46

Conread position: 1-175
Cow position: chr14:21946370-21946204 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-176
Cow position: chr14:28304807-28304973 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 153, 26

Conread position: 1-179
Cow position: chr14:14327139-14327319 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 66

Conread position: 1-181
Cow position: chr14:46490486-46490659 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 2-162
Cow position: chr14:18412614-18412767 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 144, 51

Conread position: 2-168
Cow position: chr14:11470171-11470328 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 2-170
Cow position: chr14:12137994-12137837 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 2-177
Cow position: chr14:27999058-27999227 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 140, 68

Conread position: 3-154
Cow position: chr14:36723386-36723243 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 3-162
Cow position: chr14:26116038-26115886 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 43

Conread position: 3-162
Cow position: chr14:33341733-33341577 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 16

Conread position: 3-164
Cow position: chr14:35421107-35421261 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 116, 49

Conread position: 3-168
Cow position: chr14:29964996-29964840 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 5-143
Cow position: chr14:20481866-20482005 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 82

Conread position: 6-168
Cow position: chr14:2975111-2975265 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 145, 47

Conread position: 7-169
Cow position: chr14:15944691-15944846 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 84, 40

Conread position: 22-168
Cow position: chr14:13006484-13006347 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 76, 36

Conread position: 164-422
Cow position: chr14:15197937-15198211 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 28

Conread position: 186-423
Cow position: chr14:35734945-35735196 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 193
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 125, 119

Conread position: 186-433
Cow position: chr14:48937558-48937305 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 83

Conread position: 188-417
Cow position: chr14:19542368-19542604 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 189-382
Cow position: chr14:22855039-22855249 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 189-406
Cow position: chr14:40752968-40753182 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 126, 52

Conread position: 189-422
Cow position: chr14:33099162-33098920 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 189-422
Cow position: chr14:35448743-35448991 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 107

Conread position: 189-422
Cow position: chr14:43380380-43380150 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 179

Conread position: 193-422
Cow position: chr14:25952557-25952781 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 123, 17

Conread position: 194-422
Cow position: chr14:34692233-34691997 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 5, 86

Conread position: 196-392
Cow position: chr14:37331581-37331383 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 25, 119

Conread position: 196-422
Cow position: chr14:18161275-18161485 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 125, 32

Conread position: 197-375
Cow position: chr14:41960472-41960295 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 87, 66

Conread position: 199-434
Cow position: chr14:35434849-35435081 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 172, 79

Conread position: 202-422
Cow position: chr14:15239119-15239347 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 104, 41

Conread position: 207-422
Cow position: chr14:25346459-25346245 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 106, 76

Conread position: 210-394
Cow position: chr14:43693796-43693986 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 96, 0

Conread position: 213-374
Cow position: chr14:9921053-9920888 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 27

Conread position: 214-392
Cow position: chr14:50015310-50015126 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 215-422
Cow position: chr14:5943934-5943726 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 110, 78

Conread position: 217-361
Cow position: chr14:40956604-40956754 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 45

Conread position: 222-422
Cow position: chr14:22000129-21999930 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 114

Conread position: 225-420
Cow position: chr14:38240525-38240330 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 69

Conread position: 226-432
Cow position: chr14:38542926-38542714 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 13

Conread position: 227-434
Cow position: chr14:7600195-7600407 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 83, 68

Conread position: 262-413
Cow position: chr14:20396796-20396947 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 33

Conread position: 268-416
Cow position: chr14:4942600-4942752 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 104

Show alignments to all cow chromosomes.