Cow genome map

Conread name: ruio19_n10.y1

Conread position: 1-131
Cow position: chr17:14025805-14025683 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 1-132
Cow position: chr17:21335458-21335326 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 83

Conread position: 1-139
Cow position: chr17:22773022-22772890 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-146
Cow position: chr17:32278802-32278665 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-146
Cow position: chr17:32280770-32280907 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-147
Cow position: chr17:14003930-14004064 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 1-147
Cow position: chr17:16446331-16446186 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 18

Conread position: 1-147
Cow position: chr17:24841800-24841937 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-147
Cow position: chr17:26183449-26183587 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-147
Cow position: chr17:40355363-40355501 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-148
Cow position: chr17:26000222-26000362 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 141, 52

Conread position: 1-148
Cow position: chr17:30728609-30728748 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 63

Conread position: 1-149
Cow position: chr17:11921060-11920920 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-150
Cow position: chr17:11397770-11397910 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 1-150
Cow position: chr17:30156316-30156176 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 146, 45

Conread position: 1-150
Cow position: chr17:37973962-37973815 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 99, 60

Conread position: 1-154
Cow position: chr17:11618689-11618836 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 52

Conread position: 1-154
Cow position: chr17:26231059-26231212 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 85, 52

Conread position: 1-158
Cow position: chr17:10037512-10037661 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-158
Cow position: chr17:17222445-17222595 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 1-158
Cow position: chr17:20157712-20157859 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-158
Cow position: chr17:20359217-20359364 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 1-159
Cow position: chr17:5762049-5761895 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 144, 45

Conread position: 1-159
Cow position: chr17:7571208-7571360 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 145, 52

Conread position: 1-159
Cow position: chr17:7803070-7802919 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 144, 54

Conread position: 1-159
Cow position: chr17:15883776-15883927 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 1-162
Cow position: chr17:5686009-5685841 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 1-163
Cow position: chr17:18673935-18673782 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 1-163
Cow position: chr17:19898997-19899158 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 84

Conread position: 1-163
Cow position: chr17:39963982-39964135 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 144, 25

Conread position: 1-165
Cow position: chr17:41616839-41616998 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 89

Conread position: 1-167
Cow position: chr17:21738769-21738603 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 97, 52

Conread position: 1-168
Cow position: chr17:4817632-4817791 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-168
Cow position: chr17:9965922-9965760 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 148, 35

Conread position: 1-168
Cow position: chr17:15355036-15355195 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-170
Cow position: chr17:9509891-9509729 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 142, 46

Conread position: 1-170
Cow position: chr17:25117989-25118150 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-170
Cow position: chr17:32027347-32027183 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 54

Conread position: 1-170
Cow position: chr17:35149425-35149268 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-171
Cow position: chr17:21181556-21181718 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 165, 52

Conread position: 1-172
Cow position: chr17:6787041-6787203 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 53

Conread position: 1-172
Cow position: chr17:10508329-10508170 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-173
Cow position: chr17:28888474-28888298 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 165

Conread position: 1-175
Cow position: chr17:3387822-3387987 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 1-175
Cow position: chr17:20929346-20929514 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 149, 51

Conread position: 1-175
Cow position: chr17:27795759-27795923 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 1-175
Cow position: chr17:36814466-36814635 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 144, 69

Conread position: 1-176
Cow position: chr17:25467087-25467261 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 52

Conread position: 1-189
Cow position: chr17:24559395-24559579 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 147, 45

Conread position: 1-200
Cow position: chr17:21959583-21959392 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 196, 52

Conread position: 2-147
Cow position: chr17:17193591-17193730 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 2-147
Cow position: chr17:28795877-28795740 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 2-163
Cow position: chr17:32220778-32220625 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 147, 38

Conread position: 2-164
Cow position: chr17:5048036-5048187 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 3-157
Cow position: chr17:9900009-9900155 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 143, 24

Conread position: 3-159
Cow position: chr17:43323438-43323290 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 3-163
Cow position: chr17:10222103-10221951 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 4-161
Cow position: chr17:27292349-27292203 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 4-168
Cow position: chr17:36468083-36467925 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 150, 52

Conread position: 5-147
Cow position: chr17:17410402-17410540 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 5-163
Cow position: chr17:14668611-14668762 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 141, 51

Conread position: 5-191
Cow position: chr17:27058448-27058265 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 68

Conread position: 6-143
Cow position: chr17:20306433-20306569 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 69

Conread position: 7-170
Cow position: chr17:21236633-21236788 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 15-143
Cow position: chr17:24826967-24826847 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 15-163
Cow position: chr17:4271244-4271102 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 131, 55

Conread position: 54-170
Cow position: chr17:24766781-24766659 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 185-310
Cow position: chr17:31855054-31855180 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 5, 22

Conread position: 188-421
Cow position: chr17:7683969-7684205 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 123, 54

Conread position: 189-418
Cow position: chr17:17134572-17134803 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 58

Conread position: 195-418
Cow position: chr17:14009273-14009055 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 109, 88

Conread position: 196-419
Cow position: chr17:417617-417392 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 171

Conread position: 196-421
Cow position: chr17:10831125-10830900 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 110, 185

Conread position: 197-422
Cow position: chr17:27940198-27939968 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 106, 191

Conread position: 197-433
Cow position: chr17:5226462-5226230 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 46

Conread position: 197-433
Cow position: chr17:5248513-5248755 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 107, 62

Conread position: 199-415
Cow position: chr17:23723922-23724144 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 116, 9

Conread position: 199-422
Cow position: chr17:9348703-9348937 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 82, 0

Conread position: 200-422
Cow position: chr17:12179389-12179160 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 64, 213

Conread position: 202-433
Cow position: chr17:14303640-14303404 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 199

Conread position: 216-417
Cow position: chr17:5990464-5990257 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 91, 55

Conread position: 224-422
Cow position: chr17:16222248-16222047 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 19

Conread position: 226-422
Cow position: chr17:13671289-13671086 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 226-422
Cow position: chr17:34322573-34322375 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 34

Conread position: 226-425
Cow position: chr17:33369932-33369740 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 73, 90

Conread position: 227-433
Cow position: chr17:28800288-28800063 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 218

Conread position: 228-422
Cow position: chr17:9728949-9729143 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 55

Conread position: 244-433
Cow position: chr17:35038608-35038800 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 157

Conread position: 263-422
Cow position: chr17:20155086-20155254 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 265-402
Cow position: chr17:20507267-20507130 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 49, 57

Show alignments to all cow chromosomes.