Cow genome map

Conread name: ruio19_n10.y1

Conread position: 1-143
Cow position: chr19:15076147-15076007 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 85, 54

Conread position: 1-147
Cow position: chr19:6745427-6745571 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 1-147
Cow position: chr19:8603388-8603529 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 52

Conread position: 1-147
Cow position: chr19:14421884-14421740 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 35

Conread position: 1-147
Cow position: chr19:23416830-23416691 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 137, 45

Conread position: 1-147
Cow position: chr19:24453458-24453320 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-147
Cow position: chr19:43431274-43431134 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 1-148
Cow position: chr19:7558598-7558735 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 1-150
Cow position: chr19:4339588-4339439 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 52

Conread position: 1-153
Cow position: chr19:38111518-38111662 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 124, 45

Conread position: 1-154
Cow position: chr19:25041194-25041051 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 1-155
Cow position: chr19:6687950-6687800 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 52

Conread position: 1-155
Cow position: chr19:11211225-11211077 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 142, 52

Conread position: 1-155
Cow position: chr19:14253685-14253833 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 144, 56

Conread position: 1-155
Cow position: chr19:33691184-33691335 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-156
Cow position: chr19:12747723-12747579 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 144, 69

Conread position: 1-156
Cow position: chr19:51621127-51620980 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-157
Cow position: chr19:5912907-5912758 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 145, 52

Conread position: 1-158
Cow position: chr19:2221022-2220874 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 1-158
Cow position: chr19:21199192-21199349 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 45

Conread position: 1-159
Cow position: chr19:18214150-18214003 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 1-159
Cow position: chr19:19468437-19468586 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 1-159
Cow position: chr19:55957518-55957367 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-161
Cow position: chr19:23831396-23831549 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 115, 58

Conread position: 1-162
Cow position: chr19:1791645-1791491 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 1-162
Cow position: chr19:7794706-7794853 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 1-162
Cow position: chr19:19738053-19738206 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 1-162
Cow position: chr19:41946773-41946925 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 143, 45

Conread position: 1-163
Cow position: chr19:25382634-25382478 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 1-163
Cow position: chr19:29139255-29139409 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 1-163
Cow position: chr19:42776484-42776638 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 1-163
Cow position: chr19:54915639-54915469 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-164
Cow position: chr19:52621804-52621642 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 77

Conread position: 1-165
Cow position: chr19:4586494-4586343 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 1-165
Cow position: chr19:8185256-8185410 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 52, 0

Conread position: 1-165
Cow position: chr19:17354911-17355063 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 1-165
Cow position: chr19:20622707-20622863 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 46

Conread position: 1-165
Cow position: chr19:41718911-41718755 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 157, 35

Conread position: 1-165
Cow position: chr19:55247684-55247840 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 162, 79

Conread position: 1-168
Cow position: chr19:25673472-25673310 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 31

Conread position: 1-168
Cow position: chr19:28928960-28928788 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 52

Conread position: 1-168
Cow position: chr19:38410921-38411081 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 52

Conread position: 1-169
Cow position: chr19:46094583-46094417 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 52

Conread position: 1-170
Cow position: chr19:24068231-24068073 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 1-170
Cow position: chr19:42217263-42217100 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 70

Conread position: 1-171
Cow position: chr19:10877276-10877440 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 143, 45

Conread position: 1-173
Cow position: chr19:34757949-34757778 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 85, 52

Conread position: 1-174
Cow position: chr19:1900677-1900509 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 150, 45

Conread position: 1-176
Cow position: chr19:13121230-13121068 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 145, 46

Conread position: 1-176
Cow position: chr19:43035293-43035462 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 141, 52

Conread position: 1-182
Cow position: chr19:42564198-42564370 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 2-147
Cow position: chr19:15438157-15438293 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 2-159
Cow position: chr19:10755356-10755501 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 3-143
Cow position: chr19:34166422-34166552 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 3-162
Cow position: chr19:51294233-51294080 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 144, 43

Conread position: 3-169
Cow position: chr19:30227575-30227733 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 147, 50

Conread position: 3-170
Cow position: chr19:54105508-54105667 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 4-147
Cow position: chr19:33116908-33117054 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 36

Conread position: 4-148
Cow position: chr19:17203409-17203547 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 23

Conread position: 4-155
Cow position: chr19:729691-729552 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 4-159
Cow position: chr19:37075665-37075504 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 4-161
Cow position: chr19:35245998-35246144 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 5-143
Cow position: chr19:43373096-43373232 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 48

Conread position: 5-163
Cow position: chr19:16686927-16686778 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 42

Conread position: 6-156
Cow position: chr19:12497061-12497203 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 6-156
Cow position: chr19:55590290-55590433 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 144, 47

Conread position: 7-168
Cow position: chr19:35351895-35351742 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 74

Conread position: 8-143
Cow position: chr19:36191309-36191436 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 8-155
Cow position: chr19:9391091-9390943 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 78, 45

Conread position: 8-162
Cow position: chr19:38717280-38717130 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 90, 45

Conread position: 10-147
Cow position: chr19:38637725-38637596 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 11-170
Cow position: chr19:4328812-4328661 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 146, 42

Conread position: 12-156
Cow position: chr19:13439535-13439672 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 41

Conread position: 189-422
Cow position: chr19:36010319-36010547 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 171
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 12, 30

Conread position: 193-414
Cow position: chr19:14104433-14104663 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 99, 0

Conread position: 195-423
Cow position: chr19:15494506-15494277 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 158, 114

Conread position: 196-402
Cow position: chr19:41830139-41829933 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 170

Conread position: 196-418
Cow position: chr19:15244603-15244381 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 168, 111

Conread position: 197-422
Cow position: chr19:39199136-39199367 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 107, 206

Conread position: 202-434
Cow position: chr19:48218049-48217807 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 43, 234

Conread position: 208-414
Cow position: chr19:42162941-42162732 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 49

Conread position: 214-422
Cow position: chr19:9005703-9005492 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 98, 0

Conread position: 216-402
Cow position: chr19:2994076-2993889 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 151

Conread position: 222-416
Cow position: chr19:21058552-21058349 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 44, 89

Conread position: 226-420
Cow position: chr19:20314405-20314211 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 89, 76

Conread position: 226-422
Cow position: chr19:42499080-42498866 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 226-434
Cow position: chr19:56312866-56313074 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 80, 140

Conread position: 230-430
Cow position: chr19:9097104-9096893 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 57

Conread position: 234-422
Cow position: chr19:46685491-46685677 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 8

Conread position: 257-422
Cow position: chr19:33440942-33440767 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 270-422
Cow position: chr19:4500519-4500361 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 20

Show alignments to all cow chromosomes.