Cow genome map

Conread name: ruio19_n10.y1

Conread position: 1-136
Cow position: chr23:26591845-26591704 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 1-147
Cow position: chr23:9726475-9726337 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-147
Cow position: chr23:16582843-16582705 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 1-147
Cow position: chr23:37948753-37948891 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-148
Cow position: chr23:41472687-41472828 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 52

Conread position: 1-150
Cow position: chr23:19295164-19295314 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 77, 52

Conread position: 1-150
Cow position: chr23:33232635-33232495 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 1-155
Cow position: chr23:187245-187389 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 1-155
Cow position: chr23:3204845-3204999 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 45

Conread position: 1-155
Cow position: chr23:3890508-3890362 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 46

Conread position: 1-155
Cow position: chr23:4803025-4803173 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-155
Cow position: chr23:18387524-18387377 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 69

Conread position: 1-155
Cow position: chr23:25864630-25864483 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 146, 35

Conread position: 1-157
Cow position: chr23:34264685-34264539 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 39

Conread position: 1-157
Cow position: chr23:40737952-40737801 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 69

Conread position: 1-158
Cow position: chr23:35527146-35527294 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 1-159
Cow position: chr23:3270365-3270513 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 46

Conread position: 1-159
Cow position: chr23:29972454-29972613 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 59

Conread position: 1-159
Cow position: chr23:40494385-40494546 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 77

Conread position: 1-161
Cow position: chr23:809572-809724 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 153, 62

Conread position: 1-162
Cow position: chr23:799602-799449 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-162
Cow position: chr23:18739397-18739240 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 142, 46

Conread position: 1-163
Cow position: chr23:13673965-13673795 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 1-163
Cow position: chr23:21539221-21539375 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-168
Cow position: chr23:9876932-9876776 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 1-169
Cow position: chr23:11129300-11129460 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 31

Conread position: 1-170
Cow position: chr23:2471069-2471230 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-172
Cow position: chr23:1655961-1656123 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 145, 52

Conread position: 1-174
Cow position: chr23:9874721-9874888 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 11

Conread position: 1-174
Cow position: chr23:27526651-27526814 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 0

Conread position: 1-175
Cow position: chr23:4291421-4291590 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 153, 46

Conread position: 1-176
Cow position: chr23:4003713-4003880 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-176
Cow position: chr23:24779476-24779309 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 1-176
Cow position: chr23:28873083-28872920 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 161, 45

Conread position: 1-176
Cow position: chr23:39813566-39813731 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 1-177
Cow position: chr23:344121-343951 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 78

Conread position: 1-180
Cow position: chr23:33434727-33434897 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 35

Conread position: 1-181
Cow position: chr23:27307812-27307984 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 2-141
Cow position: chr23:3835528-3835385 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 50, 87

Conread position: 2-147
Cow position: chr23:4521817-4521679 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 2-147
Cow position: chr23:9760897-9761039 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 45

Conread position: 2-170
Cow position: chr23:307523-307684 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 144, 51

Conread position: 3-150
Cow position: chr23:3983122-3982975 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 81

Conread position: 3-154
Cow position: chr23:5436574-5436431 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 3-158
Cow position: chr23:38096-38245 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 140, 43

Conread position: 3-159
Cow position: chr23:18611696-18611548 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 142, 43

Conread position: 3-176
Cow position: chr23:33244259-33244440 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 83, 44

Conread position: 3-179
Cow position: chr23:35239419-35239585 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 168, 43

Conread position: 4-175
Cow position: chr23:32621355-32621517 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 5-147
Cow position: chr23:38455108-38454961 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 5-179
Cow position: chr23:19269115-19269279 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 7-158
Cow position: chr23:11081328-11081472 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 46

Conread position: 7-182
Cow position: chr23:4416215-4416044 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 48

Conread position: 8-155
Cow position: chr23:3244846-3244705 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 63

Conread position: 8-168
Cow position: chr23:30617405-30617253 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 22-169
Cow position: chr23:19822381-19822241 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 31

Conread position: 188-409
Cow position: chr23:39456979-39456766 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 13, 38

Conread position: 194-360
Cow position: chr23:38107320-38107490 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 102

Conread position: 195-421
Cow position: chr23:32194752-32194529 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 113, 15

Conread position: 196-354
Cow position: chr23:28044816-28044971 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 196-422
Cow position: chr23:9392632-9392405 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 116, 89

Conread position: 196-422
Cow position: chr23:19913750-19913520 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 41

Conread position: 196-422
Cow position: chr23:29699101-29698883 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 62

Conread position: 196-422
Cow position: chr23:36217454-36217220 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 0

Conread position: 196-423
Cow position: chr23:27351083-27350860 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 108, 65

Conread position: 196-423
Cow position: chr23:40498841-40499075 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 94

Conread position: 196-434
Cow position: chr23:37639487-37639247 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 47, 78

Conread position: 196-443
Cow position: chr23:777926-777675 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 194
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 117, 99

Conread position: 199-404
Cow position: chr23:7289178-7288968 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 107, 23

Conread position: 200-399
Cow position: chr23:15289821-15290021 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 115, 26

Conread position: 202-422
Cow position: chr23:25360183-25360416 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 31

Conread position: 203-354
Cow position: chr23:28197848-28197998 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 11, 94

Conread position: 204-422
Cow position: chr23:11093220-11093447 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 57, 17

Conread position: 207-423
Cow position: chr23:36347923-36348151 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 118, 101

Conread position: 207-429
Cow position: chr23:35270571-35270796 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 107, 88

Conread position: 212-434
Cow position: chr23:35383969-35383729 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 92, 0

Conread position: 213-402
Cow position: chr23:12227384-12227196 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 153
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 107, 81

Conread position: 214-354
Cow position: chr23:28846853-28846993 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 88, 45

Conread position: 214-422
Cow position: chr23:28831628-28831842 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 93, 176

Conread position: 226-419
Cow position: chr23:22582949-22583143 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 31

Conread position: 226-422
Cow position: chr23:4602236-4602033 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 89, 121

Conread position: 228-374
Cow position: chr23:39758729-39758583 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 67

Conread position: 230-433
Cow position: chr23:31026210-31026002 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 74, 187

Conread position: 231-421
Cow position: chr23:34773719-34773530 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 128, 64

Conread position: 238-420
Cow position: chr23:28010658-28010481 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 16

Conread position: 238-420
Cow position: chr23:28067491-28067315 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 57, 16

Conread position: 238-421
Cow position: chr23:40920650-40920840 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 66, 55

Conread position: 239-418
Cow position: chr23:19643166-19643352 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 67, 106

Conread position: 247-422
Cow position: chr23:18154616-18154797 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 249-420
Cow position: chr23:15058751-15058577 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 111

Conread position: 250-384
Cow position: chr23:1529899-1529758 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 45

Conread position: 268-418
Cow position: chr23:28174428-28174278 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 27, 97

Show alignments to all cow chromosomes.