Cow genome map
Conread name: | ruio19_n10.y1 |
Conread position: | 1-136 |
Cow position: | chr24:44987335-44987208 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-143 |
Cow position: | chr24:18313893-18313746 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 112 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 1-147 |
Cow position: | chr24:18615041-18615191 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 117 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 54, 15 |
Conread position: | 1-147 |
Cow position: | chr24:22079500-22079638 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-147 |
Cow position: | chr24:38693839-38693702 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-150 |
Cow position: | chr24:25947822-25947681 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 120 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-150 |
Cow position: | chr24:27066268-27066409 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 119 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 145, 45 |
Conread position: | 1-153 |
Cow position: | chr24:23046858-23046713 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 122 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 144, 45 |
Conread position: | 1-155 |
Cow position: | chr24:18810871-18811015 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 119 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-155 |
Cow position: | chr24:33238225-33238071 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 65, 79 |
Conread position: | 1-155 |
Cow position: | chr24:38006678-38006529 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 97, 52 |
Conread position: | 1-156 |
Cow position: | chr24:18695915-18696067 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 52, 89 |
Conread position: | 1-157 |
Cow position: | chr24:16640950-16641100 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 148, 45 |
Conread position: | 1-158 |
Cow position: | chr24:11836364-11836215 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-159 |
Cow position: | chr24:19623895-19624052 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 117 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 97, 63 |
Conread position: | 1-159 |
Cow position: | chr24:27906479-27906625 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 124 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 1-162 |
Cow position: | chr24:2261707-2261860 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 1-163 |
Cow position: | chr24:43027187-43027033 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 90, 46 |
Conread position: | 1-164 |
Cow position: | chr24:39304881-39304716 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 76, 45 |
Conread position: | 1-169 |
Cow position: | chr24:34272850-34273017 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 128 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 47, 92 |
Conread position: | 1-170 |
Cow position: | chr24:4635128-4634967 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 133 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 90, 52 |
Conread position: | 1-172 |
Cow position: | chr24:18405241-18405078 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 135 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 141, 52 |
Conread position: | 1-172 |
Cow position: | chr24:34465466-34465294 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 125 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 74, 141 |
Conread position: | 1-172 |
Cow position: | chr24:39910993-39910830 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 145, 24 |
Conread position: | 1-174 |
Cow position: | chr24:18702438-18702605 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 135 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 144, 31 |
Conread position: | 1-175 |
Cow position: | chr24:13626323-13626491 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 131 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 141, 62 |
Conread position: | 1-175 |
Cow position: | chr24:18750747-18750911 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 134 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-176 |
Cow position: | chr24:250498-250329 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 132 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 142, 52 |
Conread position: | 1-177 |
Cow position: | chr24:12120936-12121104 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 129 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-177 |
Cow position: | chr24:28787893-28788060 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 135 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-178 |
Cow position: | chr24:29677876-29677700 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 139 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 31, 63 |
Conread position: | 1-190 |
Cow position: | chr24:11028649-11028468 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 142 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 156, 39 |
Conread position: | 2-156 |
Cow position: | chr24:43445973-43445827 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 115, 53 |
Conread position: | 2-158 |
Cow position: | chr24:38428072-38427922 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 143, 44 |
Conread position: | 2-159 |
Cow position: | chr24:27040088-27040237 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 118 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 2-163 |
Cow position: | chr24:34533162-34533329 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 3-143 |
Cow position: | chr24:5152565-5152697 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 3-150 |
Cow position: | chr24:18874779-18874642 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 120 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 3-150 |
Cow position: | chr24:34006167-34006028 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 115 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 137, 43 |
Conread position: | 3-157 |
Cow position: | chr24:162045-162191 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 3-168 |
Cow position: | chr24:39488386-39488545 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 153, 75 |
Conread position: | 3-169 |
Cow position: | chr24:25142651-25142816 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 95, 53 |
Conread position: | 3-170 |
Cow position: | chr24:10840878-10840703 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 133 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 3-170 |
Cow position: | chr24:20017386-20017227 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 3-170 |
Cow position: | chr24:21606637-21606476 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 134 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 154, 50 |
Conread position: | 3-170 |
Cow position: | chr24:36036016-36035854 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 129 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 88, 22 |
Conread position: | 5-170 |
Cow position: | chr24:35210098-35210255 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 187-422 |
Cow position: | chr24:38473439-38473188 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 177 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 189-362 |
Cow position: | chr24:31104140-31104311 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 130 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 91, 49 |
Conread position: | 193-422 |
Cow position: | chr24:43176503-43176738 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 169 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 111, 68 |
Conread position: | 196-337 |
Cow position: | chr24:37080413-37080276 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 196-361 |
Cow position: | chr24:39209667-39209837 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 196-399 |
Cow position: | chr24:2615945-2616149 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 155 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 25, 63 |
Conread position: | 196-420 |
Cow position: | chr24:31393798-31393568 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 172 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 115, 27 |
Conread position: | 196-422 |
Cow position: | chr24:7464419-7464192 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 162 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 114, 17 |
Conread position: | 196-422 |
Cow position: | chr24:44255894-44256130 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 167 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 101, 223 |
Conread position: | 196-422 |
Cow position: | chr24:44502989-44502744 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 174 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 196-423 |
Cow position: | chr24:36715530-36715755 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 165 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 63, 58 |
Conread position: | 196-433 |
Cow position: | chr24:16190446-16190689 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 184 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 109, 147 |
Conread position: | 196-433 |
Cow position: | chr24:29070173-29069937 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 184 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 108, 71 |
Conread position: | 198-422 |
Cow position: | chr24:23528298-23528068 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 163 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 53, 83 |
Conread position: | 199-350 |
Cow position: | chr24:37074624-37074470 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 199-381 |
Cow position: | chr24:24539084-24538909 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 135 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 25, 98 |
Conread position: | 200-422 |
Cow position: | chr24:27229059-27228840 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 169 |
Alignm E-value: | 8e-34 |
Alignm gaps (pig, cow): | 109, 79 |
Conread position: | 202-420 |
Cow position: | chr24:13783472-13783254 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 162 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 105, 49 |
Conread position: | 205-375 |
Cow position: | chr24:7030126-7029954 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 133 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 102, 122 |
Conread position: | 207-422 |
Cow position: | chr24:39556241-39556451 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 157 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 136, 88 |
Conread position: | 213-400 |
Cow position: | chr24:24777370-24777560 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 145 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 98, 48 |
Conread position: | 213-422 |
Cow position: | chr24:23012856-23013065 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 149 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 93, 72 |
Conread position: | 213-432 |
Cow position: | chr24:29824315-29824093 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 147, 82 |
Conread position: | 215-381 |
Cow position: | chr24:36344681-36344507 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 130 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 22, 82 |
Conread position: | 216-422 |
Cow position: | chr24:41009784-41009997 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 152 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 220-423 |
Cow position: | chr24:27884334-27884129 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 95, 63 |
Conread position: | 221-393 |
Cow position: | chr24:27078775-27078953 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 132 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 83, 72 |
Conread position: | 226-423 |
Cow position: | chr24:26906259-26906463 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 153 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 227-375 |
Cow position: | chr24:5873610-5873462 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 121 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 83, 68 |
Conread position: | 241-433 |
Cow position: | chr24:5531854-5532050 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 146 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 62, 37 |
Conread position: | 243-433 |
Cow position: | chr24:3530069-3530269 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 146 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 249-437 |
Cow position: | chr24:35556544-35556338 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 149 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 258-421 |
Cow position: | chr24:10588196-10588035 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 113, 54 |
Conread position: | 262-422 |
Cow position: | chr24:22201734-22201559 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 138 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 32, 160 |
Conread position: | 265-394 |
Cow position: | chr24:43554592-43554726 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 270-441 |
Cow position: | chr24:32418644-32418465 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 32, 132 |
Conread position: | 272-422 |
Cow position: | chr24:34721401-34721550 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 121 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 92, 42 |
Conread position: | 273-433 |
Cow position: | chr24:20320951-20320787 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 41, 32 |
Show alignments to all cow chromosomes.