Cow genome map
Conread name: | ruio19_n10.y1 |
Conread position: | 1-135 |
Cow position: | chr28:20013504-20013644 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 18, 54 |
Conread position: | 1-143 |
Cow position: | chr28:20968511-20968376 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 97, 69 |
Conread position: | 1-144 |
Cow position: | chr28:22278563-22278424 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 46, 80 |
Conread position: | 1-146 |
Cow position: | chr28:4074038-4074180 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 116 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 47, 56 |
Conread position: | 1-146 |
Cow position: | chr28:21263226-21263357 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 121 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-146 |
Cow position: | chr28:30385221-30385358 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-147 |
Cow position: | chr28:5441830-5441693 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-147 |
Cow position: | chr28:13174487-13174350 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 1-147 |
Cow position: | chr28:17680691-17680829 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-147 |
Cow position: | chr28:17738084-17737946 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-150 |
Cow position: | chr28:5236535-5236388 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 111 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-150 |
Cow position: | chr28:16857038-16856899 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 119 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-154 |
Cow position: | chr28:6563828-6563683 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 118 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-155 |
Cow position: | chr28:4163514-4163368 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-155 |
Cow position: | chr28:5630167-5630311 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 1-155 |
Cow position: | chr28:10495232-10495088 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 120 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-155 |
Cow position: | chr28:32014853-32014997 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 126 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 50, 82 |
Conread position: | 1-157 |
Cow position: | chr28:3311155-3311006 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 140, 46 |
Conread position: | 1-158 |
Cow position: | chr28:7885099-7885249 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-158 |
Cow position: | chr28:19024502-19024665 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 1-159 |
Cow position: | chr28:19994881-19994730 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 127 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 42, 53 |
Conread position: | 1-159 |
Cow position: | chr28:26304132-26304283 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 145, 61 |
Conread position: | 1-160 |
Cow position: | chr28:5552646-5552489 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 124 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 43, 81 |
Conread position: | 1-162 |
Cow position: | chr28:7644811-7644960 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 125 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 1-163 |
Cow position: | chr28:659226-659065 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 129 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 82, 52 |
Conread position: | 1-163 |
Cow position: | chr28:5199893-5200047 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 121 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-163 |
Cow position: | chr28:8716319-8716160 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 56, 81 |
Conread position: | 1-164 |
Cow position: | chr28:16200674-16200519 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 133 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 1-168 |
Cow position: | chr28:16252336-16252181 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 134 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 132, 5 |
Conread position: | 1-168 |
Cow position: | chr28:27218391-27218549 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-169 |
Cow position: | chr28:8347800-8347960 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 1-169 |
Cow position: | chr28:30293520-30293361 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 129 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 1-170 |
Cow position: | chr28:2892321-2892485 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 156, 69 |
Conread position: | 1-170 |
Cow position: | chr28:13048215-13048059 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 1-172 |
Cow position: | chr28:21103759-21103588 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 130 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 153, 28 |
Conread position: | 1-172 |
Cow position: | chr28:23296391-23296549 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 132 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 164, 45 |
Conread position: | 1-173 |
Cow position: | chr28:9418897-9418718 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 129 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 1-174 |
Cow position: | chr28:3484649-3484816 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 134 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 23, 59 |
Conread position: | 1-178 |
Cow position: | chr28:6301150-6301319 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 2-142 |
Cow position: | chr28:22183071-22182934 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 89, 55 |
Conread position: | 2-175 |
Cow position: | chr28:3726139-3725976 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 50, 80 |
Conread position: | 3-150 |
Cow position: | chr28:19262516-19262377 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 3-154 |
Cow position: | chr28:11562175-11562032 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 3-165 |
Cow position: | chr28:14657784-14657938 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 126 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 3-168 |
Cow position: | chr28:4937171-4937012 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 128 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 151, 50 |
Conread position: | 3-175 |
Cow position: | chr28:10615875-10615719 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 136 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 52, 78 |
Conread position: | 3-175 |
Cow position: | chr28:34830225-34830385 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 128 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 4-170 |
Cow position: | chr28:11398725-11398569 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 124 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 4-176 |
Cow position: | chr28:751297-751461 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 131 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 4-183 |
Cow position: | chr28:10252845-10252672 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 137 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 145, 42 |
Conread position: | 5-147 |
Cow position: | chr28:3011197-3011063 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 115 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 5-156 |
Cow position: | chr28:117690-117545 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 123 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 16, 49 |
Conread position: | 5-156 |
Cow position: | chr28:118682-118827 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 119 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 16, 49 |
Conread position: | 5-157 |
Cow position: | chr28:8165143-8164998 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 122 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 141, 48 |
Conread position: | 5-169 |
Cow position: | chr28:13356298-13356138 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 132 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 93, 48 |
Conread position: | 6-174 |
Cow position: | chr28:9812347-9812516 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 135 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 46, 15 |
Conread position: | 8-176 |
Cow position: | chr28:17620286-17620124 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 127 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 138, 45 |
Conread position: | 8-176 |
Cow position: | chr28:19128099-19127937 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 127 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 149, 45 |
Conread position: | 12-159 |
Cow position: | chr28:18761930-18761792 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 12-177 |
Cow position: | chr28:16964887-16964729 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 134, 41 |
Conread position: | 164-378 |
Cow position: | chr28:10163194-10163411 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 163 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 37, 28 |
Conread position: | 188-418 |
Cow position: | chr28:978530-978292 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 177 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 125, 0 |
Conread position: | 189-422 |
Cow position: | chr28:11690193-11689960 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 176 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 12, 107 |
Conread position: | 189-426 |
Cow position: | chr28:25306993-25307232 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 179 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 12, 49 |
Conread position: | 196-414 |
Cow position: | chr28:24330433-24330216 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 165 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 108, 186 |
Conread position: | 196-422 |
Cow position: | chr28:7595345-7595115 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 177 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 108, 46 |
Conread position: | 196-422 |
Cow position: | chr28:13179513-13179748 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 173 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 66, 17 |
Conread position: | 196-422 |
Cow position: | chr28:21941743-21941509 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 166 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 96, 207 |
Conread position: | 196-422 |
Cow position: | chr28:31415118-31414882 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 177 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 196-423 |
Cow position: | chr28:7922841-7923070 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 159 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 42, 48 |
Conread position: | 196-425 |
Cow position: | chr28:21118338-21118110 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 175 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 119, 36 |
Conread position: | 196-433 |
Cow position: | chr28:22242257-22242022 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 158 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 168, 55 |
Conread position: | 196-439 |
Cow position: | chr28:22202166-22202415 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 186 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 118, 83 |
Conread position: | 196-455 |
Cow position: | chr28:757250-756999 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 186 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 111, 66 |
Conread position: | 197-422 |
Cow position: | chr28:25315216-25315437 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 158 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 112, 169 |
Conread position: | 199-419 |
Cow position: | chr28:31339342-31339113 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 163 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 70, 27 |
Conread position: | 199-422 |
Cow position: | chr28:2577324-2577551 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 169 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 111, 6 |
Conread position: | 201-423 |
Cow position: | chr28:2641975-2642204 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 166 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 10, 19 |
Conread position: | 207-422 |
Cow position: | chr28:16613540-16613759 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 160 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 92, 128 |
Conread position: | 210-422 |
Cow position: | chr28:25498497-25498292 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 155 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 87, 54 |
Conread position: | 213-424 |
Cow position: | chr28:28438613-28438832 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 163 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 225-442 |
Cow position: | chr28:4404043-4404270 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 165 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 79, 15 |
Conread position: | 226-398 |
Cow position: | chr28:5158398-5158578 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 133 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 40, 19 |
Conread position: | 228-417 |
Cow position: | chr28:1885344-1885538 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 144 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 79, 33 |
Conread position: | 230-355 |
Cow position: | chr28:17333738-17333867 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 238-420 |
Cow position: | chr28:4110917-4111101 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 142 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 64, 18 |
Conread position: | 262-416 |
Cow position: | chr28:15993651-15993809 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 49, 33 |
Show alignments to all cow chromosomes.