Cow genome map
| Conread name: | ruio19_n10.y1 |
| Conread position: | 1-88 |
| Cow position: | chr4:60072688-60072603 (view UCSC Genome Browser custom track) |
| Alignm length: | 88 |
| Alignm identity: | 78 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-135 |
| Cow position: | chr4:30845428-30845564 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 1-143 |
| Cow position: | chr4:50131573-50131709 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 111, 45 |
| Conread position: | 1-145 |
| Cow position: | chr4:19708996-19709132 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-145 |
| Cow position: | chr4:27699088-27699229 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 99, 52 |
| Conread position: | 1-146 |
| Cow position: | chr4:3853532-3853669 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-147 |
| Cow position: | chr4:16762669-16762528 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 86, 52 |
| Conread position: | 1-147 |
| Cow position: | chr4:19542993-19543134 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 48 |
| Conread position: | 1-147 |
| Cow position: | chr4:32458803-32458665 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-147 |
| Cow position: | chr4:54937138-54937285 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 1-147 |
| Cow position: | chr4:67393148-67393286 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-150 |
| Cow position: | chr4:23444989-23444844 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 97, 14 |
| Conread position: | 1-150 |
| Cow position: | chr4:26959912-26959772 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-150 |
| Cow position: | chr4:33388914-33389056 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-150 |
| Cow position: | chr4:45250027-45250168 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 147, 56 |
| Conread position: | 1-150 |
| Cow position: | chr4:68076482-68076345 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1-153 |
| Cow position: | chr4:26684418-26684583 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 110 |
| Conread position: | 1-155 |
| Cow position: | chr4:12245266-12245412 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 1-155 |
| Cow position: | chr4:22073267-22073117 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 1-155 |
| Cow position: | chr4:23943588-23943444 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-155 |
| Cow position: | chr4:27521609-27521759 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 59, 80 |
| Conread position: | 1-155 |
| Cow position: | chr4:34722424-34722570 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-155 |
| Cow position: | chr4:50837758-50837904 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 143, 54 |
| Conread position: | 1-155 |
| Cow position: | chr4:61451270-61451417 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 1-156 |
| Cow position: | chr4:13393689-13393851 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 1-156 |
| Cow position: | chr4:20147240-20147385 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-156 |
| Cow position: | chr4:23809761-23809600 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 1-157 |
| Cow position: | chr4:7043763-7043615 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 1-157 |
| Cow position: | chr4:45723302-45723450 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-158 |
| Cow position: | chr4:7816349-7816504 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 1-158 |
| Cow position: | chr4:11186020-11186170 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 145, 45 |
| Conread position: | 1-158 |
| Cow position: | chr4:12473903-12474053 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-158 |
| Cow position: | chr4:13284436-13284586 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-158 |
| Cow position: | chr4:23799709-23799549 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 74, 69 |
| Conread position: | 1-159 |
| Cow position: | chr4:6072998-6072848 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-159 |
| Cow position: | chr4:12901501-12901334 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-159 |
| Cow position: | chr4:13668565-13668415 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-159 |
| Cow position: | chr4:19496551-19496707 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 1-159 |
| Cow position: | chr4:22138164-22138013 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-159 |
| Cow position: | chr4:48902568-48902409 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 1-159 |
| Cow position: | chr4:56755911-56756061 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-160 |
| Cow position: | chr4:9444630-9444478 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-162 |
| Cow position: | chr4:8439170-8439010 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 34 |
| Conread position: | 1-162 |
| Cow position: | chr4:19584760-19584920 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 1-162 |
| Cow position: | chr4:22101208-22101055 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-162 |
| Cow position: | chr4:32561886-32562038 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 1-162 |
| Cow position: | chr4:43909818-43909969 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-162 |
| Cow position: | chr4:45483855-45484011 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 1-162 |
| Cow position: | chr4:53050049-53050201 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 1-163 |
| Cow position: | chr4:2713803-2713650 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-163 |
| Cow position: | chr4:5250244-5250399 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 1-163 |
| Cow position: | chr4:10999658-10999501 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 50, 72 |
| Conread position: | 1-163 |
| Cow position: | chr4:18974480-18974637 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 142, 43 |
| Conread position: | 1-163 |
| Cow position: | chr4:23451037-23450879 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 145, 45 |
| Conread position: | 1-163 |
| Cow position: | chr4:25802747-25802900 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-163 |
| Cow position: | chr4:56591094-56591250 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 145, 52 |
| Conread position: | 1-163 |
| Cow position: | chr4:61999141-61998990 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 80 |
| Conread position: | 1-165 |
| Cow position: | chr4:1985704-1985861 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 1-165 |
| Cow position: | chr4:16637018-16636868 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-165 |
| Cow position: | chr4:19238274-19238428 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 153, 59 |
| Conread position: | 1-165 |
| Cow position: | chr4:19573341-19573498 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 46 |
| Conread position: | 1-165 |
| Cow position: | chr4:31505967-31505809 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-165 |
| Cow position: | chr4:43894761-43894600 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-166 |
| Cow position: | chr4:54191146-54191314 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 84 |
| Conread position: | 1-168 |
| Cow position: | chr4:44772986-44772825 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 137, 46 |
| Conread position: | 1-169 |
| Cow position: | chr4:23808006-23808173 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 1-170 |
| Cow position: | chr4:37675670-37675842 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 88 |
| Conread position: | 1-170 |
| Cow position: | chr4:38946272-38946432 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-170 |
| Cow position: | chr4:56852904-56853067 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-170 |
| Cow position: | chr4:63198315-63198149 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 1-172 |
| Cow position: | chr4:66380282-66380120 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-173 |
| Cow position: | chr4:5790699-5790863 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-173 |
| Cow position: | chr4:47305134-47305298 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-174 |
| Cow position: | chr4:19199230-19199066 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-174 |
| Cow position: | chr4:47748468-47748631 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 1-176 |
| Cow position: | chr4:501626-501450 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 69, 52 |
| Conread position: | 1-176 |
| Cow position: | chr4:40995787-40995955 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 169, 52 |
| Conread position: | 1-178 |
| Cow position: | chr4:30935306-30935138 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-179 |
| Cow position: | chr4:29116722-29116552 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 1-252 |
| Cow position: | chr4:56746046-56746297 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 158, 69 |
| Conread position: | 2-147 |
| Cow position: | chr4:9571162-9571297 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 2-150 |
| Cow position: | chr4:51986521-51986380 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2-163 |
| Cow position: | chr4:38949477-38949321 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-166 |
| Cow position: | chr4:47230940-47230786 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 50 |
| Conread position: | 2-166 |
| Cow position: | chr4:47283955-47283802 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 50 |
| Conread position: | 2-178 |
| Cow position: | chr4:1646034-1645863 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 3-147 |
| Cow position: | chr4:2774778-2774914 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-147 |
| Cow position: | chr4:46061001-46061139 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 3-147 |
| Cow position: | chr4:46656188-46656325 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 3-150 |
| Cow position: | chr4:25197436-25197296 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 44 |
| Conread position: | 3-163 |
| Cow position: | chr4:23271341-23271489 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-169 |
| Cow position: | chr4:42347543-42347698 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-170 |
| Cow position: | chr4:36876800-36876641 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 142, 43 |
| Conread position: | 3-186 |
| Cow position: | chr4:22164135-22164307 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 49 |
| Conread position: | 4-177 |
| Cow position: | chr4:48321464-48321282 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 5-176 |
| Cow position: | chr4:58172963-58173136 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 62 |
| Conread position: | 6-156 |
| Cow position: | chr4:50687804-50687664 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 142, 47 |
| Conread position: | 7-150 |
| Cow position: | chr4:46235102-46234968 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 7-156 |
| Cow position: | chr4:43436325-43436467 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 139, 46 |
| Conread position: | 7-159 |
| Cow position: | chr4:45909914-45909757 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 48, 29 |
| Conread position: | 7-161 |
| Cow position: | chr4:56498817-56498665 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 10-177 |
| Cow position: | chr4:45742023-45741862 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 12-169 |
| Cow position: | chr4:47035657-47035508 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 12-170 |
| Cow position: | chr4:45629979-45629827 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 145, 41 |
| Conread position: | 186-415 |
| Cow position: | chr4:39011341-39011117 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 170, 76 |
| Conread position: | 188-362 |
| Cow position: | chr4:21050103-21050280 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 189-419 |
| Cow position: | chr4:13920100-13919863 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 189-422 |
| Cow position: | chr4:37730039-37729801 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 193-422 |
| Cow position: | chr4:30288337-30288561 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 60 |
| Conread position: | 193-433 |
| Cow position: | chr4:3244988-3245227 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 113, 212 |
| Conread position: | 194-422 |
| Cow position: | chr4:10871403-10871172 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 20 |
| Conread position: | 194-422 |
| Cow position: | chr4:23926757-23926533 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 112, 99 |
| Conread position: | 194-422 |
| Cow position: | chr4:24087693-24087924 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 7, 37 |
| Conread position: | 194-422 |
| Cow position: | chr4:33294998-33294773 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 9, 43 |
| Conread position: | 194-422 |
| Cow position: | chr4:44644942-44644709 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 49 |
| Conread position: | 195-406 |
| Cow position: | chr4:14798674-14798886 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 195-421 |
| Cow position: | chr4:38623703-38623468 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 11, 40 |
| Conread position: | 195-422 |
| Cow position: | chr4:65479007-65478773 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 26, 208 |
| Conread position: | 195-425 |
| Cow position: | chr4:62733849-62733613 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 124, 110 |
| Conread position: | 196-364 |
| Cow position: | chr4:44905040-44904866 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 196-413 |
| Cow position: | chr4:21254485-21254250 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 224 |
| Conread position: | 196-420 |
| Cow position: | chr4:62674290-62674512 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 168, 16 |
| Conread position: | 196-422 |
| Cow position: | chr4:11652981-11653218 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 196-422 |
| Cow position: | chr4:20464901-20465134 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 196-422 |
| Cow position: | chr4:48404240-48404003 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 196-425 |
| Cow position: | chr4:43848214-43847999 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 168, 25 |
| Conread position: | 196-433 |
| Cow position: | chr4:37835937-37835705 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 151 |
| Conread position: | 197-397 |
| Cow position: | chr4:6381278-6381070 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 197-422 |
| Cow position: | chr4:11543158-11543382 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 141, 36 |
| Conread position: | 197-433 |
| Cow position: | chr4:20291019-20291260 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 197-433 |
| Cow position: | chr4:63514700-63514452 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 117, 82 |
| Conread position: | 198-422 |
| Cow position: | chr4:22567880-22568107 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 106, 72 |
| Conread position: | 199-417 |
| Cow position: | chr4:45095653-45095440 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 84 |
| Conread position: | 199-418 |
| Cow position: | chr4:5499233-5499468 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 94, 146 |
| Conread position: | 200-422 |
| Cow position: | chr4:52706808-52707032 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 112, 61 |
| Conread position: | 200-423 |
| Cow position: | chr4:19207395-19207616 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 202-418 |
| Cow position: | chr4:42638244-42638033 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 108, 91 |
| Conread position: | 202-420 |
| Cow position: | chr4:13772485-13772266 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 7, 61 |
| Conread position: | 205-394 |
| Cow position: | chr4:30223279-30223080 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 207-368 |
| Cow position: | chr4:58801965-58801800 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 99, 123 |
| Conread position: | 207-422 |
| Cow position: | chr4:44735128-44734919 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 209-422 |
| Cow position: | chr4:29133671-29133465 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 155, 45 |
| Conread position: | 213-376 |
| Cow position: | chr4:61983059-61982895 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 98, 82 |
| Conread position: | 213-422 |
| Cow position: | chr4:47235640-47235857 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 217-433 |
| Cow position: | chr4:39612870-39613072 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 222-422 |
| Cow position: | chr4:21415129-21414924 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 231-441 |
| Cow position: | chr4:26747726-26747512 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 73, 19 |
| Conread position: | 236-416 |
| Cow position: | chr4:47476766-47476950 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 70, 45 |
| Conread position: | 238-433 |
| Cow position: | chr4:24370399-24370194 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 244-415 |
| Cow position: | chr4:47409187-47409365 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 245-422 |
| Cow position: | chr4:64697208-64697025 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 263-417 |
| Cow position: | chr4:8615389-8615226 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 33, 141 |
| Conread position: | 280-433 |
| Cow position: | chr4:20622084-20621930 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 27, 128 |
Show alignments to all cow chromosomes.