Cow genome map
| Conread name: | ruio19_n10.y1 |
| Conread position: | 1-135 |
| Cow position: | chr5:53980664-53980538 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-143 |
| Cow position: | chr5:49821518-49821653 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-143 |
| Cow position: | chr5:64162688-64162544 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 84 |
| Conread position: | 1-144 |
| Cow position: | chr5:43839909-43839774 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-147 |
| Cow position: | chr5:7057312-7057171 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 1-147 |
| Cow position: | chr5:14550494-14550356 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-147 |
| Cow position: | chr5:14903978-14903838 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 142, 69 |
| Conread position: | 1-147 |
| Cow position: | chr5:18574262-18574408 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 20, 72 |
| Conread position: | 1-147 |
| Cow position: | chr5:30492704-30492565 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-147 |
| Cow position: | chr5:45854587-45854727 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-147 |
| Cow position: | chr5:55965804-55965666 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-147 |
| Cow position: | chr5:56643157-56643294 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-147 |
| Cow position: | chr5:57086973-57086836 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-148 |
| Cow position: | chr5:10255062-10255218 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-148 |
| Cow position: | chr5:34347645-34347506 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-150 |
| Cow position: | chr5:19561358-19561217 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-150 |
| Cow position: | chr5:55949589-55949449 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-155 |
| Cow position: | chr5:19052702-19052557 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-155 |
| Cow position: | chr5:64140628-64140772 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-156 |
| Cow position: | chr5:32394689-32394837 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 61, 44 |
| Conread position: | 1-157 |
| Cow position: | chr5:16185468-16185617 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 145, 52 |
| Conread position: | 1-157 |
| Cow position: | chr5:43611788-43611935 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-157 |
| Cow position: | chr5:55783873-55783723 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 1-158 |
| Cow position: | chr5:7012760-7012612 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 1-159 |
| Cow position: | chr5:18062229-18062072 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 1-159 |
| Cow position: | chr5:43858330-43858180 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-159 |
| Cow position: | chr5:57755945-57755796 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-159 |
| Cow position: | chr5:61914654-61914809 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 1-163 |
| Cow position: | chr5:17999406-17999251 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 142, 46 |
| Conread position: | 1-163 |
| Cow position: | chr5:40122520-40122366 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-163 |
| Cow position: | chr5:42064295-42064449 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-163 |
| Cow position: | chr5:54340856-54341008 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-163 |
| Cow position: | chr5:58487465-58487615 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 55, 80 |
| Conread position: | 1-163 |
| Cow position: | chr5:61593356-61593507 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 144, 18 |
| Conread position: | 1-165 |
| Cow position: | chr5:62996047-62996203 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-168 |
| Cow position: | chr5:57399163-57399003 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 148, 52 |
| Conread position: | 1-168 |
| Cow position: | chr5:57447576-57447417 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-168 |
| Cow position: | chr5:60514939-60514778 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 121, 68 |
| Conread position: | 1-170 |
| Cow position: | chr5:15770366-15770203 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 50, 68 |
| Conread position: | 1-172 |
| Cow position: | chr5:35208351-35208514 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-173 |
| Cow position: | chr5:64060536-64060696 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-175 |
| Cow position: | chr5:28881602-28881425 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 1-175 |
| Cow position: | chr5:56624427-56624259 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 156, 69 |
| Conread position: | 1-176 |
| Cow position: | chr5:35969622-35969795 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 52 |
| Conread position: | 1-176 |
| Cow position: | chr5:66582054-66582227 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 1-179 |
| Cow position: | chr5:12902007-12902179 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 144, 45 |
| Conread position: | 1-179 |
| Cow position: | chr5:20882534-20882356 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 1-179 |
| Cow position: | chr5:71445480-71445648 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-147 |
| Cow position: | chr5:66972520-66972656 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 2-157 |
| Cow position: | chr5:32975469-32975321 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 145, 53 |
| Conread position: | 2-162 |
| Cow position: | chr5:50723137-50723289 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-168 |
| Cow position: | chr5:51012090-51012248 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 2-169 |
| Cow position: | chr5:25446976-25447136 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 147, 34 |
| Conread position: | 2-171 |
| Cow position: | chr5:74858666-74858836 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 74 |
| Conread position: | 2-172 |
| Cow position: | chr5:24108969-24108807 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 144, 51 |
| Conread position: | 2-172 |
| Cow position: | chr5:26149125-26149283 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 2-174 |
| Cow position: | chr5:12566452-12566290 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 3-146 |
| Cow position: | chr5:35235597-35235462 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 3-162 |
| Cow position: | chr5:61049424-61049577 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 153, 50 |
| Conread position: | 3-163 |
| Cow position: | chr5:39937207-39937358 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 88, 44 |
| Conread position: | 3-164 |
| Cow position: | chr5:58841-58687 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-147 |
| Cow position: | chr5:40740236-40740100 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 5-162 |
| Cow position: | chr5:52108174-52108017 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 5-177 |
| Cow position: | chr5:65140393-65140556 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 141, 31 |
| Conread position: | 6-148 |
| Cow position: | chr5:54712975-54712841 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 6-155 |
| Cow position: | chr5:57526834-57526693 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 6-169 |
| Cow position: | chr5:48819363-48819522 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 47 |
| Conread position: | 7-147 |
| Cow position: | chr5:17987799-17987667 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 7-150 |
| Cow position: | chr5:59335866-59336002 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 7-163 |
| Cow position: | chr5:41935561-41935410 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 134, 46 |
| Conread position: | 7-178 |
| Cow position: | chr5:5760220-5760048 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 51 |
| Conread position: | 10-159 |
| Cow position: | chr5:44582670-44582522 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 10-175 |
| Cow position: | chr5:43434905-43434749 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 16-170 |
| Cow position: | chr5:56428469-56428321 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 130, 37 |
| Conread position: | 144-384 |
| Cow position: | chr5:50855704-50855938 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 220, 36 |
| Conread position: | 144-418 |
| Cow position: | chr5:9675587-9675300 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 186-420 |
| Cow position: | chr5:55195471-55195704 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 129, 76 |
| Conread position: | 188-373 |
| Cow position: | chr5:65096597-65096785 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 80 |
| Conread position: | 188-397 |
| Cow position: | chr5:33283409-33283193 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 9, 127 |
| Conread position: | 188-420 |
| Cow position: | chr5:10095768-10095519 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 188-437 |
| Cow position: | chr5:51360984-51361232 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 119, 195 |
| Conread position: | 189-417 |
| Cow position: | chr5:32336016-32335778 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 189-423 |
| Cow position: | chr5:44660136-44659904 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 11, 128 |
| Conread position: | 190-421 |
| Cow position: | chr5:4989635-4989873 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 10, 106 |
| Conread position: | 193-422 |
| Cow position: | chr5:55985466-55985231 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 109, 146 |
| Conread position: | 195-415 |
| Cow position: | chr5:33471195-33470977 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 195-417 |
| Cow position: | chr5:70609048-70609273 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 120, 66 |
| Conread position: | 195-422 |
| Cow position: | chr5:50770296-50770066 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 6, 100 |
| Conread position: | 196-421 |
| Cow position: | chr5:8232449-8232218 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 164, 88 |
| Conread position: | 196-422 |
| Cow position: | chr5:11955445-11955217 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 196-422 |
| Cow position: | chr5:13528547-13528315 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 196-422 |
| Cow position: | chr5:18883031-18882811 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 108, 37 |
| Conread position: | 196-422 |
| Cow position: | chr5:53914810-53914600 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 168, 65 |
| Conread position: | 196-422 |
| Cow position: | chr5:70768607-70768839 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 196-425 |
| Cow position: | chr5:56097063-56096827 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 111, 44 |
| Conread position: | 196-432 |
| Cow position: | chr5:18582861-18583094 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 117, 98 |
| Conread position: | 196-432 |
| Cow position: | chr5:18674612-18674839 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 196-435 |
| Cow position: | chr5:21517089-21516859 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 114, 51 |
| Conread position: | 196-442 |
| Cow position: | chr5:7659590-7659346 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 33, 100 |
| Conread position: | 197-416 |
| Cow position: | chr5:6567947-6568170 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 198-414 |
| Cow position: | chr5:31722704-31722486 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 109, 171 |
| Conread position: | 199-404 |
| Cow position: | chr5:65053704-65053913 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 93, 205 |
| Conread position: | 199-433 |
| Cow position: | chr5:32342352-32342142 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 113, 43 |
| Conread position: | 204-362 |
| Cow position: | chr5:44380510-44380661 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 204-422 |
| Cow position: | chr5:34471004-34470783 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 107, 53 |
| Conread position: | 207-422 |
| Cow position: | chr5:57291059-57290840 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 213-414 |
| Cow position: | chr5:7780469-7780670 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 218-402 |
| Cow position: | chr5:18040841-18041030 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 90, 155 |
| Conread position: | 221-399 |
| Cow position: | chr5:17829532-17829343 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 221-433 |
| Cow position: | chr5:57147687-57147909 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 74, 214 |
| Conread position: | 224-425 |
| Cow position: | chr5:29337112-29336900 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 226-393 |
| Cow position: | chr5:49635203-49635028 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 226-417 |
| Cow position: | chr5:40888748-40888553 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 84, 36 |
| Conread position: | 227-422 |
| Cow position: | chr5:624690-624887 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 94, 7 |
| Conread position: | 229-420 |
| Cow position: | chr5:52816454-52816256 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 234-425 |
| Cow position: | chr5:11975030-11974832 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 79, 161 |
| Conread position: | 252-422 |
| Cow position: | chr5:61876150-61875975 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 259-422 |
| Cow position: | chr5:39327203-39327035 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 52, 34 |
| Conread position: | 262-422 |
| Cow position: | chr5:15806738-15806900 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 265-441 |
| Cow position: | chr5:47083408-47083585 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 294-422 |
| Cow position: | chr5:14493882-14493753 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
Show alignments to all cow chromosomes.