Cow genome map
| Conread name: | ruio19_n10.y1 |
| Conread position: | 1-141 |
| Cow position: | chrX:41363768-41363628 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 1-142 |
| Cow position: | chrX:35681658-35681790 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 1-144 |
| Cow position: | chrX:29478814-29478947 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-147 |
| Cow position: | chrX:9451436-9451569 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-147 |
| Cow position: | chrX:23182892-23182739 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-147 |
| Cow position: | chrX:27393935-27393790 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 46 |
| Conread position: | 1-147 |
| Cow position: | chrX:31250479-31250618 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 111, 45 |
| Conread position: | 1-147 |
| Cow position: | chrX:40337001-40337139 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-147 |
| Cow position: | chrX:42492432-42492293 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 1-147 |
| Cow position: | chrX:42760343-42760481 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-147 |
| Cow position: | chrX:48822251-48822114 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-148 |
| Cow position: | chrX:4109275-4109414 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-149 |
| Cow position: | chrX:37717812-37717951 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-150 |
| Cow position: | chrX:876756-876616 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-150 |
| Cow position: | chrX:3542947-3543096 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 55, 79 |
| Conread position: | 1-150 |
| Cow position: | chrX:13785131-13784981 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 1-150 |
| Cow position: | chrX:27508933-27508793 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-150 |
| Cow position: | chrX:33678382-33678239 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 1-150 |
| Cow position: | chrX:39887123-39886981 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 1-150 |
| Cow position: | chrX:44040267-44040408 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-151 |
| Cow position: | chrX:36283431-36283572 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-154 |
| Cow position: | chrX:37867344-37867489 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-155 |
| Cow position: | chrX:4592411-4592250 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-155 |
| Cow position: | chrX:11670777-11670923 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-155 |
| Cow position: | chrX:24170638-24170489 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 5 |
| Conread position: | 1-157 |
| Cow position: | chrX:19511026-19510870 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 83, 76 |
| Conread position: | 1-157 |
| Cow position: | chrX:31489611-31489759 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-157 |
| Cow position: | chrX:40680705-40680853 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-158 |
| Cow position: | chrX:1996361-1996212 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-158 |
| Cow position: | chrX:17929092-17929237 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 67, 52 |
| Conread position: | 1-158 |
| Cow position: | chrX:30672299-30672145 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 45 |
| Conread position: | 1-158 |
| Cow position: | chrX:42506858-42506707 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 76 |
| Conread position: | 1-158 |
| Cow position: | chrX:42855549-42855702 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 96, 46 |
| Conread position: | 1-159 |
| Cow position: | chrX:51810-51662 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-159 |
| Cow position: | chrX:4632766-4632614 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 47 |
| Conread position: | 1-159 |
| Cow position: | chrX:10278961-10279115 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 56 |
| Conread position: | 1-159 |
| Cow position: | chrX:11589276-11589127 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-159 |
| Cow position: | chrX:14925363-14925514 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 1-159 |
| Cow position: | chrX:19356554-19356705 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 145, 52 |
| Conread position: | 1-159 |
| Cow position: | chrX:25035291-25035141 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-159 |
| Cow position: | chrX:27175089-27175240 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 1-159 |
| Cow position: | chrX:36367844-36367695 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-159 |
| Cow position: | chrX:41941714-41941864 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 144, 52 |
| Conread position: | 1-159 |
| Cow position: | chrX:45044543-45044694 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-161 |
| Cow position: | chrX:42247091-42246937 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 142, 46 |
| Conread position: | 1-161 |
| Cow position: | chrX:46532404-46532247 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 1-162 |
| Cow position: | chrX:19018740-19018585 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-162 |
| Cow position: | chrX:23335885-23335732 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-163 |
| Cow position: | chrX:6407634-6407784 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-163 |
| Cow position: | chrX:25282947-25282768 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-163 |
| Cow position: | chrX:25815810-25815655 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 97, 28 |
| Conread position: | 1-163 |
| Cow position: | chrX:35285264-35285419 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 145, 46 |
| Conread position: | 1-163 |
| Cow position: | chrX:35409843-35409995 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 1-163 |
| Cow position: | chrX:36866264-36866417 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-163 |
| Cow position: | chrX:40480775-40480604 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 35 |
| Conread position: | 1-163 |
| Cow position: | chrX:46587913-46588066 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 156, 43 |
| Conread position: | 1-163 |
| Cow position: | chrX:46909906-46910052 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-164 |
| Cow position: | chrX:12290810-12290963 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-164 |
| Cow position: | chrX:13122029-13122189 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 25, 50 |
| Conread position: | 1-165 |
| Cow position: | chrX:17524293-17524136 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 154, 52 |
| Conread position: | 1-165 |
| Cow position: | chrX:24331867-24332022 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-166 |
| Cow position: | chrX:25037078-25037237 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 163, 54 |
| Conread position: | 1-166 |
| Cow position: | chrX:40531952-40531779 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 1-167 |
| Cow position: | chrX:38967979-38968143 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 45 |
| Conread position: | 1-169 |
| Cow position: | chrX:4403408-4403567 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-169 |
| Cow position: | chrX:17498413-17498575 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 156, 52 |
| Conread position: | 1-169 |
| Cow position: | chrX:26881989-26881829 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-169 |
| Cow position: | chrX:36039490-36039662 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 48, 151 |
| Conread position: | 1-169 |
| Cow position: | chrX:41027250-41027412 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 46 |
| Conread position: | 1-169 |
| Cow position: | chrX:42449923-42449763 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-170 |
| Cow position: | chrX:17231826-17231988 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 1-170 |
| Cow position: | chrX:44054893-44055053 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-172 |
| Cow position: | chrX:41790338-41790174 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 1-174 |
| Cow position: | chrX:4559824-4559987 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 97, 52 |
| Conread position: | 1-175 |
| Cow position: | chrX:28846199-28846380 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 82, 52 |
| Conread position: | 1-175 |
| Cow position: | chrX:29451460-29451290 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 73 |
| Conread position: | 1-175 |
| Cow position: | chrX:44225640-44225472 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 156, 52 |
| Conread position: | 1-176 |
| Cow position: | chrX:1938105-1938273 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 144, 55 |
| Conread position: | 1-176 |
| Cow position: | chrX:2314528-2314362 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 1-176 |
| Cow position: | chrX:3580035-3580204 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 153, 45 |
| Conread position: | 1-176 |
| Cow position: | chrX:12095681-12095514 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-176 |
| Cow position: | chrX:33466715-33466883 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 148, 45 |
| Conread position: | 1-176 |
| Cow position: | chrX:44995590-44995758 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 145, 45 |
| Conread position: | 1-181 |
| Cow position: | chrX:41435458-41435281 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 57 |
| Conread position: | 1-186 |
| Cow position: | chrX:1960334-1960157 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 176, 52 |
| Conread position: | 2-147 |
| Cow position: | chrX:33654752-33654615 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 2-148 |
| Cow position: | chrX:41991042-41990894 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 2-150 |
| Cow position: | chrX:27261284-27261421 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 50, 81 |
| Conread position: | 2-156 |
| Cow position: | chrX:8759713-8759860 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 52 |
| Conread position: | 2-162 |
| Cow position: | chrX:34193989-34193836 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 143, 51 |
| Conread position: | 2-170 |
| Cow position: | chrX:20345542-20345702 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 3-143 |
| Cow position: | chrX:10479842-10479974 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-157 |
| Cow position: | chrX:4092017-4092161 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 142, 43 |
| Conread position: | 3-169 |
| Cow position: | chrX:30962784-30962625 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 51 |
| Conread position: | 3-169 |
| Cow position: | chrX:41199320-41199471 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 3-176 |
| Cow position: | chrX:8642137-8642303 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 146, 50 |
| Conread position: | 3-176 |
| Cow position: | chrX:26979698-26979534 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 4-155 |
| Cow position: | chrX:20339800-20339659 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 4-159 |
| Cow position: | chrX:5872411-5872573 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 5-144 |
| Cow position: | chrX:10516348-10516479 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 5-159 |
| Cow position: | chrX:34420829-34420976 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 5-162 |
| Cow position: | chrX:37489814-37489972 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 5-174 |
| Cow position: | chrX:34441359-34441201 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 6-157 |
| Cow position: | chrX:42159037-42159180 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 6-169 |
| Cow position: | chrX:597383-597228 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 8-159 |
| Cow position: | chrX:22387152-22387003 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 48 |
| Conread position: | 186-478 |
| Cow position: | chrX:25824254-25823951 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 42, 6 |
| Conread position: | 189-386 |
| Cow position: | chrX:16933509-16933712 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 106, 29 |
| Conread position: | 189-417 |
| Cow position: | chrX:36044367-36044139 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 113, 44 |
| Conread position: | 194-363 |
| Cow position: | chrX:31051146-31051316 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 43 |
| Conread position: | 196-394 |
| Cow position: | chrX:20128829-20128634 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 167, 94 |
| Conread position: | 196-413 |
| Cow position: | chrX:4794136-4793916 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 116, 29 |
| Conread position: | 196-413 |
| Cow position: | chrX:21989874-21990086 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 168, 32 |
| Conread position: | 196-422 |
| Cow position: | chrX:4425021-4425255 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 118, 201 |
| Conread position: | 196-425 |
| Cow position: | chrX:28515815-28515592 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 96, 47 |
| Conread position: | 197-416 |
| Cow position: | chrX:5121028-5121251 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 197-434 |
| Cow position: | chrX:10462679-10462923 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 198-433 |
| Cow position: | chrX:17265043-17264811 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 107, 39 |
| Conread position: | 199-433 |
| Cow position: | chrX:25261394-25261153 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 112, 94 |
| Conread position: | 200-433 |
| Cow position: | chrX:25707774-25707545 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 114, 31 |
| Conread position: | 207-412 |
| Cow position: | chrX:263756-263543 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 208-422 |
| Cow position: | chrX:4629620-4629399 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 33, 85 |
| Conread position: | 208-423 |
| Cow position: | chrX:46372690-46372464 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 98, 85 |
| Conread position: | 209-432 |
| Cow position: | chrX:15844166-15843936 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 95, 220 |
| Conread position: | 213-423 |
| Cow position: | chrX:6570177-6570383 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 70 |
| Conread position: | 214-433 |
| Cow position: | chrX:34865782-34865555 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 90, 80 |
| Conread position: | 229-422 |
| Cow position: | chrX:19976920-19976716 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 230-401 |
| Cow position: | chrX:38693636-38693814 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 35 |
| Conread position: | 238-422 |
| Cow position: | chrX:19093948-19093759 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 76, 57 |
| Conread position: | 244-439 |
| Cow position: | chrX:30377661-30377481 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 250-422 |
| Cow position: | chrX:40342634-40342813 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 264-422 |
| Cow position: | chrX:32736189-32736026 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 140 |
| Conread position: | 264-433 |
| Cow position: | chrX:40333991-40333821 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 267-415 |
| Cow position: | chrX:13909807-13909959 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 271-422 |
| Cow position: | chrX:4162973-4162821 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 91, 24 |
| Conread position: | 275-422 |
| Cow position: | chrX:42529624-42529466 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 278-415 |
| Cow position: | chrX:45070474-45070333 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 311-422 |
| Cow position: | chrX:36029101-36029216 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.