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Cow genome map

           
Conread name:
           
ruio20_a11.y1
        

               
Conread position:
               
258-504
               

               
Cow position:
               
chr25:26090070-26089822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
279-516
               

               
Cow position:
               
chr25:11131344-11131586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
139, 124
               

               
Conread position:
               
282-501
               

               
Cow position:
               
chr25:27868570-27868791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
139, 107
               

               
Conread position:
               
282-512
               

               
Cow position:
               
chr25:7329314-7329547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
282-516
               

               
Cow position:
               
chr25:35332933-35333161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
293-513
               

               
Cow position:
               
chr25:12899532-12899758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
297-482
               

               
Cow position:
               
chr25:2194726-2194912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
54, 146
               

               
Conread position:
               
297-492
               

               
Cow position:
               
chr25:20060251-20060050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 170
               

               
Conread position:
               
297-513
               

               
Cow position:
               
chr25:12204251-12204475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 72
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr25:17712316-17712487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
298-472
               

               
Cow position:
               
chr25:2046771-2046599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
298-473
               

               
Cow position:
               
chr25:26112056-26112228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 70
               

               
Conread position:
               
298-478
               

               
Cow position:
               
chr25:2110865-2111033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
298-478
               

               
Cow position:
               
chr25:14467303-14467114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
298-480
               

               
Cow position:
               
chr25:6256156-6255969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
298-484
               

               
Cow position:
               
chr25:13333205-13333396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
298-486
               

               
Cow position:
               
chr25:5837184-5836993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
298-486
               

               
Cow position:
               
chr25:10365970-10365780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 153
               

               
Conread position:
               
298-486
               

               
Cow position:
               
chr25:24727005-24726809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
58, 180
               

               
Conread position:
               
298-487
               

               
Cow position:
               
chr25:395137-395327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
298-487
               

               
Cow position:
               
chr25:6891737-6891552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
115, 50
               

               
Conread position:
               
298-490
               

               
Cow position:
               
chr25:15286758-15286565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
298-490
               

               
Cow position:
               
chr25:40321511-40321320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
58, 113
               

               
Conread position:
               
298-491
               

               
Cow position:
               
chr25:21193162-21192958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 179
               

               
Conread position:
               
298-493
               

               
Cow position:
               
chr25:11662038-11661835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
298-496
               

               
Cow position:
               
chr25:22297235-22297035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
298-500
               

               
Cow position:
               
chr25:20394984-20395178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
298-500
               

               
Cow position:
               
chr25:36026789-36026994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 198
               

               
Conread position:
               
298-501
               

               
Cow position:
               
chr25:25754215-25754011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr25:7800918-7801129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr25:10012267-10012056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr25:30319667-30319458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
106, 191
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr25:2136133-2136348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
89, 108
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr25:8347291-8347500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
298-504
               

               
Cow position:
               
chr25:8918496-8918286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
298-504
               

               
Cow position:
               
chr25:24452388-24452185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
298-507
               

               
Cow position:
               
chr25:12817154-12817369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
53, 190
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr25:1762889-1763086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr25:33550287-33550504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
60, 110
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr25:20348640-20348865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr25:5514788-5515011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr25:5847025-5846812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr25:6470438-6470217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr25:16064678-16064889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr25:18564277-18564484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 65
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:4002578-4002800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:6961368-6961155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:8560651-8560867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:11585300-11585516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 109
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:14791534-14791755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:15377115-15377325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:16001738-16001527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 62
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:20069502-20069719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:20785802-20785588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
123, 95
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:21245825-21245606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 184
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:21895104-21894886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 109
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:24669649-24669440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 76
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:25051602-25051380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr25:35612515-35612315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
176, 45
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:61439-61649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
104, 149
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:1838021-1838236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:5792025-5791801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 171
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:9957250-9957039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:10137880-10138093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 102
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:10643528-10643310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
53, 152
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:13380834-13380610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:14196638-14196860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:14225014-14224804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
121, 62
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:14512897-14513113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:18265945-18266162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:25827244-25827470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:26087297-26087518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 174
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:26654688-26654910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:26700820-26701029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:28188167-28187946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 211
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:29215607-29215388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:31732954-31732735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:33978419-33978214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
106, 39
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:37594196-37594405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
180, 70
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr25:40957205-40956985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
298-515
               

               
Cow position:
               
chr25:9990308-9990095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
184, 54
               

               
Conread position:
               
298-515
               

               
Cow position:
               
chr25:36081655-36081878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
298-515
               

               
Cow position:
               
chr25:38425147-38425362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 74
               

               
Conread position:
               
298-515
               

               
Cow position:
               
chr25:41364197-41363981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
120, 50
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:788051-788266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
124, 16
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:1735534-1735318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 168
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:6474317-6474085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
52, 111
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:7581646-7581429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:7641672-7641448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:9349475-9349279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:9396232-9396447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
99, 152
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:10504553-10504335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:14570151-14570377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:20076275-20076499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 80
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:24405954-24405731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
115, 105
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:35344820-35345033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
187, 102
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:35625392-35625182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
122, 6
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:36033218-36033440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 78
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr25:36761888-36762107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
118, 146
               

               
Conread position:
               
299-473
               

               
Cow position:
               
chr25:16400467-16400302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
299-485
               

               
Cow position:
               
chr25:6424805-6424615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
299-510
               

               
Cow position:
               
chr25:12239365-12239151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
99, 180
               

               
Conread position:
               
299-510
               

               
Cow position:
               
chr25:17566370-17566583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
299-510
               

               
Cow position:
               
chr25:21289123-21289342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
52, 180
               

               
Conread position:
               
299-512
               

               
Cow position:
               
chr25:11437019-11436809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
157, 76
               

               
Conread position:
               
299-513
               

               
Cow position:
               
chr25:13569384-13569173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
299-513
               

               
Cow position:
               
chr25:13642533-13642313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
42, 189
               

               
Conread position:
               
299-516
               

               
Cow position:
               
chr25:20007930-20008134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
122, 44
               

               
Conread position:
               
299-516
               

               
Cow position:
               
chr25:37448220-37448436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 44
               

               
Conread position:
               
299-516
               

               
Cow position:
               
chr25:38135531-38135752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
300-460
               

               
Cow position:
               
chr25:2595962-2596133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
300-490
               

               
Cow position:
               
chr25:19679126-19679320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
56, 107
               

               
Conread position:
               
300-504
               

               
Cow position:
               
chr25:12840934-12840733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
300-506
               

               
Cow position:
               
chr25:23829333-23829135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
187, 7
               

               
Conread position:
               
300-511
               

               
Cow position:
               
chr25:9961394-9961176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
27, 191
               

               
Conread position:
               
300-512
               

               
Cow position:
               
chr25:36036996-36036781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 100
               

               
Conread position:
               
300-513
               

               
Cow position:
               
chr25:7216612-7216831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
300-513
               

               
Cow position:
               
chr25:8225881-8226103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
51, 109
               

               
Conread position:
               
300-515
               

               
Cow position:
               
chr25:7306082-7306306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
301-509
               

               
Cow position:
               
chr25:38981895-38982093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
301-516
               

               
Cow position:
               
chr25:12319553-12319341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
302-459
               

               
Cow position:
               
chr25:24008391-24008228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
302-513
               

               
Cow position:
               
chr25:36535649-36535434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 14
               

               
Conread position:
               
303-513
               

               
Cow position:
               
chr25:41384295-41384081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
306-463
               

               
Cow position:
               
chr25:12261107-12260944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
306-513
               

               
Cow position:
               
chr25:36779282-36779500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
306-516
               

               
Cow position:
               
chr25:8512305-8512085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 204
               

               
Conread position:
               
307-506
               

               
Cow position:
               
chr25:12824223-12824024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
96, 53
               

               
Conread position:
               
307-513
               

               
Cow position:
               
chr25:13736520-13736314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 121
               

               
Conread position:
               
308-511
               

               
Cow position:
               
chr25:26270142-26269940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 117
               

               
Conread position:
               
310-512
               

               
Cow position:
               
chr25:13272363-13272567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
311-516
               

               
Cow position:
               
chr25:8157715-8157501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
311-516
               

               
Cow position:
               
chr25:17144227-17144431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 32
               

               
Conread position:
               
312-513
               

               
Cow position:
               
chr25:18905677-18905884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
39, 176
               

               
Conread position:
               
312-516
               

               
Cow position:
               
chr25:17704545-17704746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
313-504
               

               
Cow position:
               
chr25:20133518-20133324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
315-493
               

               
Cow position:
               
chr25:17914579-17914764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr25:7750249-7750450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
315-512
               

               
Cow position:
               
chr25:14945643-14945452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
315-516
               

               
Cow position:
               
chr25:27801089-27801284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
319-510
               

               
Cow position:
               
chr25:6803357-6803542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
78, 21
               

               
Conread position:
               
319-516
               

               
Cow position:
               
chr25:22241794-22241972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
320-513
               

               
Cow position:
               
chr25:21042191-21042385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 32
               

               
Conread position:
               
320-514
               

               
Cow position:
               
chr25:25861556-25861353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
321-513
               

               
Cow position:
               
chr25:12755686-12755488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
83, 22
               

               
Conread position:
               
323-473
               

               
Cow position:
               
chr25:35110323-35110165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
323-502
               

               
Cow position:
               
chr25:3982851-3983029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr25:13672195-13672392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
323-512
               

               
Cow position:
               
chr25:12521154-12520966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 156
               

               
Conread position:
               
324-506
               

               
Cow position:
               
chr25:26133846-26134035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
74, 151
               

               
Conread position:
               
324-511
               

               
Cow position:
               
chr25:17342257-17342455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
327-512
               

               
Cow position:
               
chr25:11315722-11315902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
330-515
               

               
Cow position:
               
chr25:22332578-22332764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
74, 13
               

               
Conread position:
               
331-513
               

               
Cow position:
               
chr25:23323017-23323199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 154
               

               
Conread position:
               
334-506
               

               
Cow position:
               
chr25:36138820-36138656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
337-501
               

               
Cow position:
               
chr25:15440958-15440791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
65, 5
               

               
Conread position:
               
337-516
               

               
Cow position:
               
chr25:12081496-12081318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
338-506
               

               
Cow position:
               
chr25:24651630-24651460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
23, 147
               

               
Conread position:
               
338-516
               

               
Cow position:
               
chr25:22751187-22751005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
339-462
               

               
Cow position:
               
chr25:14931940-14931810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
339-510
               

               
Cow position:
               
chr25:6943295-6943114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 153
               

               
Conread position:
               
340-515
               

               
Cow position:
               
chr25:31704817-31705004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
343-513
               

               
Cow position:
               
chr25:21893163-21893337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
344-487
               

               
Cow position:
               
chr25:5920766-5920916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
346-512
               

               
Cow position:
               
chr25:13443579-13443413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
141, 54
               

               
Conread position:
               
346-513
               

               
Cow position:
               
chr25:36124508-36124684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
347-512
               

               
Cow position:
               
chr25:19317093-19317264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
352-515
               

               
Cow position:
               
chr25:6121931-6121768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
353-512
               

               
Cow position:
               
chr25:26679065-26679224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
354-511
               

               
Cow position:
               
chr25:9002513-9002669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
67, 115
               

               
Conread position:
               
362-513
               

               
Cow position:
               
chr25:31732488-31732337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
362-516
               

               
Cow position:
               
chr25:8961620-8961774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
364-516
               

               
Cow position:
               
chr25:30618914-30619066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 36
               

               
Conread position:
               
366-512
               

               
Cow position:
               
chr25:6687800-6687948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 27
               

               
Conread position:
               
370-512
               

               
Cow position:
               
chr25:32588025-32587880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
375-513
               

               
Cow position:
               
chr25:22730692-22730828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
375-516
               

               
Cow position:
               
chr25:12997451-12997597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
390-516
               

               
Cow position:
               
chr25:9880504-9880631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
407-513
               

               
Cow position:
               
chr25:1824201-1824098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
415-513
               

               
Cow position:
               
chr25:30816788-30816888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
419-513
               

               
Cow position:
               
chr25:30449948-30450044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
419-515
               

               
Cow position:
               
chr25:12691777-12691677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
429-516
               

               
Cow position:
               
chr25:13754478-13754565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.