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Cow genome map

           
Conread name:
           
ruio20_a11.y1
        

               
Conread position:
               
232-478
               

               
Cow position:
               
chr5:72846032-72845787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
275-507
               

               
Cow position:
               
chr5:34463803-34463556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
279-506
               

               
Cow position:
               
chr5:24996437-24996201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
279-513
               

               
Cow position:
               
chr5:30487035-30487269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
279-513
               

               
Cow position:
               
chr5:41523006-41522774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
282-463
               

               
Cow position:
               
chr5:4322204-4322387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 122
               

               
Conread position:
               
282-516
               

               
Cow position:
               
chr5:37645871-37646105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
284-506
               

               
Cow position:
               
chr5:62995641-62995868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
286-484
               

               
Cow position:
               
chr5:57591489-57591695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
291-512
               

               
Cow position:
               
chr5:34624771-34624985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 113
               

               
Conread position:
               
295-462
               

               
Cow position:
               
chr5:71158457-71158284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
48, 90
               

               
Conread position:
               
295-463
               

               
Cow position:
               
chr5:74610885-74610714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
295-512
               

               
Cow position:
               
chr5:74858380-74858601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 108
               

               
Conread position:
               
296-464
               

               
Cow position:
               
chr5:48154666-48154493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 34
               

               
Conread position:
               
296-488
               

               
Cow position:
               
chr5:4507154-4506949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
297-462
               

               
Cow position:
               
chr5:61656415-61656582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
297-495
               

               
Cow position:
               
chr5:61488304-61488097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
297-503
               

               
Cow position:
               
chr5:12709694-12709906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
297-512
               

               
Cow position:
               
chr5:56523982-56524200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
297-513
               

               
Cow position:
               
chr5:29353321-29353098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
59, 22
               

               
Conread position:
               
297-513
               

               
Cow position:
               
chr5:37377684-37377891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
298-435
               

               
Cow position:
               
chr5:14703157-14703016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
298-451
               

               
Cow position:
               
chr5:37814433-37814588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 78
               

               
Conread position:
               
298-454
               

               
Cow position:
               
chr5:63917601-63917441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
298-455
               

               
Cow position:
               
chr5:16938198-16938037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
298-455
               

               
Cow position:
               
chr5:28229967-28230124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
98, 114
               

               
Conread position:
               
298-455
               

               
Cow position:
               
chr5:44054228-44054065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
298-455
               

               
Cow position:
               
chr5:50870351-50870516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr5:18702403-18702231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 134
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr5:20554940-20554769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr5:21524974-21525149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr5:28330522-28330355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
104, 62
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr5:33661664-33661835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
298-463
               

               
Cow position:
               
chr5:40889474-40889307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
298-466
               

               
Cow position:
               
chr5:63388604-63388775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
298-469
               

               
Cow position:
               
chr5:47601626-47601803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 108
               

               
Conread position:
               
298-470
               

               
Cow position:
               
chr5:56467510-56467685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
298-472
               

               
Cow position:
               
chr5:72007043-72006867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
298-473
               

               
Cow position:
               
chr5:3492011-3492183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
106, 52
               

               
Conread position:
               
298-473
               

               
Cow position:
               
chr5:61600222-61600407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
298-477
               

               
Cow position:
               
chr5:57271455-57271273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
298-478
               

               
Cow position:
               
chr5:1027882-1027698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
298-478
               

               
Cow position:
               
chr5:45036831-45037014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
123, 114
               

               
Conread position:
               
298-480
               

               
Cow position:
               
chr5:5201726-5201907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 19
               

               
Conread position:
               
298-480
               

               
Cow position:
               
chr5:45705857-45706041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
298-480
               

               
Cow position:
               
chr5:56518400-56518215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
298-483
               

               
Cow position:
               
chr5:32963820-32963633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
298-483
               

               
Cow position:
               
chr5:65933118-65932930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
298-486
               

               
Cow position:
               
chr5:59326019-59325833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 62
               

               
Conread position:
               
298-487
               

               
Cow position:
               
chr5:30816525-30816722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 91
               

               
Conread position:
               
298-487
               

               
Cow position:
               
chr5:35145162-35145351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
298-488
               

               
Cow position:
               
chr5:15426335-15426532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 106
               

               
Conread position:
               
298-490
               

               
Cow position:
               
chr5:18090537-18090729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
120, 43
               

               
Conread position:
               
298-491
               

               
Cow position:
               
chr5:11427432-11427233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 177
               

               
Conread position:
               
298-491
               

               
Cow position:
               
chr5:45226014-45225816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
298-492
               

               
Cow position:
               
chr5:40357060-40356858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
298-492
               

               
Cow position:
               
chr5:53835524-53835720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
120, 104
               

               
Conread position:
               
298-493
               

               
Cow position:
               
chr5:29680888-29681090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
298-493
               

               
Cow position:
               
chr5:59298149-59297951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
298-495
               

               
Cow position:
               
chr5:43738142-43737946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
298-498
               

               
Cow position:
               
chr5:27419911-27419717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
187, 64
               

               
Conread position:
               
298-498
               

               
Cow position:
               
chr5:55176696-55176903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
298-499
               

               
Cow position:
               
chr5:28324155-28324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
298-500
               

               
Cow position:
               
chr5:39094363-39094571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
298-501
               

               
Cow position:
               
chr5:34885346-34885148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 128
               

               
Conread position:
               
298-501
               

               
Cow position:
               
chr5:36855022-36855219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
298-501
               

               
Cow position:
               
chr5:41951275-41951078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
183, 131
               

               
Conread position:
               
298-501
               

               
Cow position:
               
chr5:42667579-42667372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr5:360137-359927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 190
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr5:17063284-17063069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 109
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr5:37941983-37941777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 163
               

               
Conread position:
               
298-502
               

               
Cow position:
               
chr5:74019961-74019754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
298-503
               

               
Cow position:
               
chr5:44752501-44752296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
181, 105
               

               
Conread position:
               
298-504
               

               
Cow position:
               
chr5:43923340-43923134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
298-504
               

               
Cow position:
               
chr5:45409135-45409341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
298-504
               

               
Cow position:
               
chr5:46510057-46509847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
71, 106
               

               
Conread position:
               
298-504
               

               
Cow position:
               
chr5:58005053-58005264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 180
               

               
Conread position:
               
298-506
               

               
Cow position:
               
chr5:20974634-20974425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
298-506
               

               
Cow position:
               
chr5:42845791-42845572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
100, 76
               

               
Conread position:
               
298-506
               

               
Cow position:
               
chr5:47317160-47316953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
108, 71
               

               
Conread position:
               
298-506
               

               
Cow position:
               
chr5:64392964-64393177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
53, 178
               

               
Conread position:
               
298-506
               

               
Cow position:
               
chr5:65887205-65886987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 183
               

               
Conread position:
               
298-506
               

               
Cow position:
               
chr5:75437087-75436865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
298-507
               

               
Cow position:
               
chr5:14550776-14550562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
48, 188
               

               
Conread position:
               
298-507
               

               
Cow position:
               
chr5:47313283-47313497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
52, 39
               

               
Conread position:
               
298-507
               

               
Cow position:
               
chr5:62870227-62870020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
298-508
               

               
Cow position:
               
chr5:5111267-5111052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 88
               

               
Conread position:
               
298-508
               

               
Cow position:
               
chr5:40109311-40109515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
68, 29
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr5:6504070-6503858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
104, 129
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr5:16025651-16025437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr5:21944191-21944421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr5:34506116-34505903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
104, 149
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr5:35208071-35208287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
53, 107
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr5:63964363-63964146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
49, 162
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr5:65776576-65776362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 112
               

               
Conread position:
               
298-509
               

               
Cow position:
               
chr5:66815766-66815548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:3281641-3281859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
53, 172
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:14420535-14420316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 133
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:21828674-21828892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:27154832-27155048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:31640237-31640449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 106
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:32153506-32153295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 165
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:34049919-34050142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
58, 181
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:50533573-50533360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
123, 50
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:51490944-51490732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
298-510
               

               
Cow position:
               
chr5:56433608-56433833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 111
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:3204645-3204859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
92, 22
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:9859909-9859686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
53, 111
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:10261429-10261208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
53, 133
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:28926378-28926155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
58, 179
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:30639043-30638838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:32975742-32975528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
109, 71
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:44583309-44583107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:50483052-50482841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
120, 83
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:50950363-50950579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:53855513-53855725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:54350551-54350336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
106, 70
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:57736924-57737124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:58855913-58856128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 105
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:59443442-59443223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:72150061-72150275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
121, 49
               

               
Conread position:
               
298-511
               

               
Cow position:
               
chr5:73080022-73080228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
119, 18
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:6045097-6045320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:9090214-9089997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:14314331-14314548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:22242976-22242746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:23169009-23168800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
186, 50
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:28927783-28927560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:32697003-32696796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:34288660-34288442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:34300736-34300945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:39447721-39447509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
74, 106
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:41164898-41165114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:44994228-44994014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 105
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:50637639-50637852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:50975695-50975928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:55967073-55966854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:57935304-57935082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
36, 110
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:58793805-58793581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
53, 81
               

               
Conread position:
               
298-512
               

               
Cow position:
               
chr5:74643852-74643649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:458291-458516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
52, 195
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:2309754-2309529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:2500379-2500152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:3771656-3771877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
101, 76
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:4032179-4031962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
106, 40
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:4617183-4617395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:5257487-5257261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:7140295-7140079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:9390345-9390580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:16184899-16185115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 50
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:16508905-16509127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
52, 21
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:17999685-17999465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
100, 183
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:18573980-18574202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
103, 119
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:21040164-21039951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
99, 48
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:24485616-24485407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
122, 45
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:26595295-26595076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:26990203-26990423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:33414598-33414381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:34441982-34441761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:34528371-34528578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
80, 106
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:35235899-35235682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 186
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:42064012-42064232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 45
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:45940796-45940582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:51053838-51053626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
124, 105
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:54086345-54086568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:54311143-54311363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:54405086-54404862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 79
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:55756630-55756393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:56135159-56134937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:58144794-58144574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 183
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:61839996-61840215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
115, 186
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:62826944-62826725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
298-513
               

               
Cow position:
               
chr5:67932652-67932439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
38, 50
               

               
Conread position:
               
298-514
               

               
Cow position:
               
chr5:55145553-55145340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
298-515
               

               
Cow position:
               
chr5:42777574-42777794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
298-515
               

               
Cow position:
               
chr5:43395328-43395120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:4220790-4221010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:6130162-6130384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:8994756-8994535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 105
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:17027904-17028125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:18898793-18899006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
119, 52
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:20779572-20779365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
188, 62
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:21617265-21617488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:22643408-22643196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:24348921-24349137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
120, 62
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:26262864-26262644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:26561963-26562188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:28946249-28946029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:29212758-29212974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:29504919-29505142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:29827863-29828076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
119, 62
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:31918464-31918673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:32956282-32956064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:34115472-34115683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
124, 47
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:35209667-35209445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:37425552-37425773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:37646741-37646513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
41, 88
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:37714095-37713864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:40039961-40039738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 80
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:43992135-43992354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:44796909-44796703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
124, 54
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:44848207-44847994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 43
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:49685471-49685241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:49820952-49821170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:50821598-50821813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:50900715-50900928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:52000028-52000253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 109
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:52165373-52165147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:52645266-52645050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:53842098-53842311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 50
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:58320652-58320438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
126, 67
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:63987638-63987415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
16, 51
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:64758954-64758737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:72287102-72286885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
298-516
               

               
Cow position:
               
chr5:72564571-72564794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
102, 71
               

               
Conread position:
               
299-464
               

               
Cow position:
               
chr5:19278881-19278721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
119, 33
               

               
Conread position:
               
299-492
               

               
Cow position:
               
chr5:55821177-55821380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
72, 196
               

               
Conread position:
               
299-493
               

               
Cow position:
               
chr5:60519977-60520170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
299-509
               

               
Cow position:
               
chr5:1766533-1766326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 104
               

               
Conread position:
               
299-509
               

               
Cow position:
               
chr5:37064904-37065115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
51, 112
               

               
Conread position:
               
299-510
               

               
Cow position:
               
chr5:47704323-47704102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 177
               

               
Conread position:
               
299-510
               

               
Cow position:
               
chr5:53146075-53145859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 6
               

               
Conread position:
               
299-511
               

               
Cow position:
               
chr5:28456600-28456382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 120
               

               
Conread position:
               
299-511
               

               
Cow position:
               
chr5:28459902-28459683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 181
               

               
Conread position:
               
299-512
               

               
Cow position:
               
chr5:8024382-8024167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
120, 44
               

               
Conread position:
               
299-512
               

               
Cow position:
               
chr5:42744604-42744812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
299-512
               

               
Cow position:
               
chr5:65752667-65752886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
299-513
               

               
Cow position:
               
chr5:39936913-39937143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
299-516
               

               
Cow position:
               
chr5:20344967-20345192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 67
               

               
Conread position:
               
299-516
               

               
Cow position:
               
chr5:34638696-34638914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
299-516
               

               
Cow position:
               
chr5:56820449-56820230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
299-516
               

               
Cow position:
               
chr5:62142481-62142706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 107
               

               
Conread position:
               
300-476
               

               
Cow position:
               
chr5:26133262-26133096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
300-480
               

               
Cow position:
               
chr5:31469773-31469587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
300-504
               

               
Cow position:
               
chr5:42747968-42748176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
300-506
               

               
Cow position:
               
chr5:37190287-37190076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
300-510
               

               
Cow position:
               
chr5:44049514-44049726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
100, 47
               

               
Conread position:
               
300-510
               

               
Cow position:
               
chr5:64137063-64137280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
300-511
               

               
Cow position:
               
chr5:50215747-50215536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
51, 16
               

               
Conread position:
               
300-511
               

               
Cow position:
               
chr5:56070664-56070884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
300-512
               

               
Cow position:
               
chr5:7044899-7044679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
300-512
               

               
Cow position:
               
chr5:60126185-60126399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
300-514
               

               
Cow position:
               
chr5:1678211-1678420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
300-515
               

               
Cow position:
               
chr5:26377855-26377639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
100, 160
               

               
Conread position:
               
300-516
               

               
Cow position:
               
chr5:11229862-11229642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 108
               

               
Conread position:
               
300-516
               

               
Cow position:
               
chr5:43474659-43474875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 103
               

               
Conread position:
               
300-516
               

               
Cow position:
               
chr5:46122539-46122323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
301-511
               

               
Cow position:
               
chr5:54713924-54713706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 188
               

               
Conread position:
               
301-512
               

               
Cow position:
               
chr5:16893963-16893745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
301-512
               

               
Cow position:
               
chr5:57575578-57575797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
301-513
               

               
Cow position:
               
chr5:28224266-28224480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
301-516
               

               
Cow position:
               
chr5:49362179-49361962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
49, 132
               

               
Conread position:
               
302-443
               

               
Cow position:
               
chr5:12820131-12820271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
302-481
               

               
Cow position:
               
chr5:33467227-33467046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
101, 60
               

               
Conread position:
               
302-507
               

               
Cow position:
               
chr5:42677048-42677254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
302-512
               

               
Cow position:
               
chr5:29903708-29903497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
302-513
               

               
Cow position:
               
chr5:17644842-17644627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
303-489
               

               
Cow position:
               
chr5:55088954-55089142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
115, 57
               

               
Conread position:
               
303-511
               

               
Cow position:
               
chr5:52667841-52668055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
304-516
               

               
Cow position:
               
chr5:46512951-46512738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
52, 106
               

               
Conread position:
               
305-514
               

               
Cow position:
               
chr5:3639666-3639459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
306-453
               

               
Cow position:
               
chr5:57576031-57576184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 31
               

               
Conread position:
               
306-507
               

               
Cow position:
               
chr5:48828973-48829177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
306-513
               

               
Cow position:
               
chr5:41609117-41609317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
158, 97
               

               
Conread position:
               
306-513
               

               
Cow position:
               
chr5:47323268-47323490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
40, 194
               

               
Conread position:
               
306-516
               

               
Cow position:
               
chr5:55928760-55928974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
104, 94
               

               
Conread position:
               
307-478
               

               
Cow position:
               
chr5:39242371-39242205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 53
               

               
Conread position:
               
310-463
               

               
Cow position:
               
chr5:9024445-9024288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
310-502
               

               
Cow position:
               
chr5:44028480-44028287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 94
               

               
Conread position:
               
311-502
               

               
Cow position:
               
chr5:41452844-41452649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 66
               

               
Conread position:
               
312-513
               

               
Cow position:
               
chr5:51935006-51935217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
42, 179
               

               
Conread position:
               
315-510
               

               
Cow position:
               
chr5:39333715-39333515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
315-511
               

               
Cow position:
               
chr5:29980159-29979957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
315-511
               

               
Cow position:
               
chr5:62107668-62107467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
38, 95
               

               
Conread position:
               
316-513
               

               
Cow position:
               
chr5:21964119-21964316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
316-515
               

               
Cow position:
               
chr5:59115208-59115415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
54, 169
               

               
Conread position:
               
318-516
               

               
Cow position:
               
chr5:55955735-55955938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
319-463
               

               
Cow position:
               
chr5:61875347-61875206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 54
               

               
Conread position:
               
319-506
               

               
Cow position:
               
chr5:12866998-12866797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
31, 178
               

               
Conread position:
               
319-509
               

               
Cow position:
               
chr5:30092799-30092601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 172
               

               
Conread position:
               
320-459
               

               
Cow position:
               
chr5:44028914-44028769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
320-510
               

               
Cow position:
               
chr5:41486906-41486713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
320-515
               

               
Cow position:
               
chr5:57327624-57327822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 157
               

               
Conread position:
               
321-512
               

               
Cow position:
               
chr5:30950087-30949889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
323-513
               

               
Cow position:
               
chr5:23529442-23529251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
324-497
               

               
Cow position:
               
chr5:11540208-11540039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
324-511
               

               
Cow position:
               
chr5:14629980-14629785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
325-503
               

               
Cow position:
               
chr5:64060457-64060277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 152
               

               
Conread position:
               
325-504
               

               
Cow position:
               
chr5:3004563-3004741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
325-516
               

               
Cow position:
               
chr5:16214524-16214717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
325-516
               

               
Cow position:
               
chr5:54060110-54060308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
325-516
               

               
Cow position:
               
chr5:62985353-62985556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
33, 168
               

               
Conread position:
               
326-512
               

               
Cow position:
               
chr5:55068543-55068732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 105
               

               
Conread position:
               
326-513
               

               
Cow position:
               
chr5:21920205-21920408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
326-513
               

               
Cow position:
               
chr5:57768135-57767956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
328-504
               

               
Cow position:
               
chr5:36255420-36255239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
328-511
               

               
Cow position:
               
chr5:66581803-66581986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
77, 146
               

               
Conread position:
               
328-513
               

               
Cow position:
               
chr5:71579013-71579203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
20, 157
               

               
Conread position:
               
332-503
               

               
Cow position:
               
chr5:44849879-44849714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
333-479
               

               
Cow position:
               
chr5:51919517-51919665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
338-511
               

               
Cow position:
               
chr5:35459445-35459269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
341-511
               

               
Cow position:
               
chr5:51801117-51800947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
343-512
               

               
Cow position:
               
chr5:16206301-16206127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
343-516
               

               
Cow position:
               
chr5:39874980-39875154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
343-516
               

               
Cow position:
               
chr5:66972282-66972459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
76, 136
               

               
Conread position:
               
344-516
               

               
Cow position:
               
chr5:47721393-47721574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
346-496
               

               
Cow position:
               
chr5:19294628-19294480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 35
               

               
Conread position:
               
346-516
               

               
Cow position:
               
chr5:7921542-7921374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
349-510
               

               
Cow position:
               
chr5:19335929-19335757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
352-506
               

               
Cow position:
               
chr5:36624097-36624251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
353-513
               

               
Cow position:
               
chr5:56334543-56334714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 47
               

               
Conread position:
               
354-516
               

               
Cow position:
               
chr5:18288995-18289161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
356-510
               

               
Cow position:
               
chr5:54768042-54767884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
356-511
               

               
Cow position:
               
chr5:45273633-45273476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
359-511
               

               
Cow position:
               
chr5:56680118-56680276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
362-516
               

               
Cow position:
               
chr5:60747402-60747246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 20
               

               
Conread position:
               
369-516
               

               
Cow position:
               
chr5:16179644-16179493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
369-516
               

               
Cow position:
               
chr5:23678824-23678669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
375-513
               

               
Cow position:
               
chr5:13717684-13717541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 112
               

               
Conread position:
               
377-511
               

               
Cow position:
               
chr5:29895087-29895224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
378-516
               

               
Cow position:
               
chr5:60448105-60448246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
42, 109
               
Show alignments to all cow chromosomes.