Cow genome map
| Conread name: | ruio32_f18.y1 |
| Conread position: | 1-582 |
| Cow position: | chr17:22452190-22451609 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 346, 364 |
| Conread position: | 1-584 |
| Cow position: | chr17:22552073-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 1-588 |
| Cow position: | chr17:22499120-22498533 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 58 |
| Conread position: | 1-606 |
| Cow position: | chr17:22590247-22589642 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 366, 355 |
| Conread position: | 1-637 |
| Cow position: | chr17:22499288-22498652 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 58 |
| Conread position: | 1-638 |
| Cow position: | chr17:22552241-22551604 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 1-638 |
| Cow position: | chr17:22552745-22552108 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 32 |
| Conread position: | 2-606 |
| Cow position: | chr17:22552996-22552392 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 365 |
| Conread position: | 6-638 |
| Cow position: | chr17:22473278-22473910 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 113 |
| Conread position: | 7-492 |
| Cow position: | chr17:22589652-22589170 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 35-626 |
| Cow position: | chr17:22452324-22451733 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 69 |
| Conread position: | 42-632 |
| Cow position: | chr17:22499331-22498741 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 316, 326 |
| Conread position: | 42-638 |
| Cow position: | chr17:22452401-22451805 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 141 |
| Conread position: | 42-638 |
| Cow position: | chr17:22552536-22551940 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 497, 488 |
| Conread position: | 42-638 |
| Cow position: | chr17:22553040-22552444 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 314 |
| Conread position: | 45-521 |
| Cow position: | chr17:22589699-22589223 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 46-599 |
| Cow position: | chr17:22589950-22589397 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 321 |
| Conread position: | 46-599 |
| Cow position: | chr17:22590286-22589733 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 46-638 |
| Cow position: | chr17:22499159-22498567 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 68 |
| Conread position: | 46-638 |
| Cow position: | chr17:22589866-22589274 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 48-595 |
| Cow position: | chr17:22473404-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 318 |
| Conread position: | 64-624 |
| Cow position: | chr17:22589764-22589204 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 303 |
| Conread position: | 64-638 |
| Cow position: | chr17:22499393-22498819 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 305 |
| Conread position: | 64-638 |
| Cow position: | chr17:22552346-22551772 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 307 |
| Conread position: | 64-638 |
| Cow position: | chr17:22552766-22552192 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 307 |
| Conread position: | 66-638 |
| Cow position: | chr17:22552596-22552024 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 229 |
| Conread position: | 67-638 |
| Cow position: | chr17:22590013-22589442 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 470 |
| Conread position: | 74-625 |
| Cow position: | chr17:22473262-22473813 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 70 |
| Conread position: | 125-638 |
| Cow position: | chr17:22452402-22451889 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 136 |
| Conread position: | 148-608 |
| Cow position: | chr17:22553102-22552642 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 291 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 199, 218 |
| Conread position: | 162-623 |
| Cow position: | chr17:22590254-22589793 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 195 |
| Conread position: | 196-608 |
| Cow position: | chr17:22553138-22552726 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 270 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 229, 216 |
| Conread position: | 196-638 |
| Cow position: | chr17:22590304-22589862 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 155, 148 |
| Conread position: | 199-638 |
| Cow position: | chr17:22452412-22451973 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 172 |
| Conread position: | 210-638 |
| Cow position: | chr17:22499331-22498903 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 320 |
| Conread position: | 218-637 |
| Cow position: | chr17:22499409-22498988 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 302-638 |
| Cow position: | chr17:22499409-22499071 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 5, 0 |
Show alignments to all cow chromosomes.