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Cow genome map

           
Conread name:
           
ruio32_f18.y1
        

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:43053435-43053194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr18:42959696-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr18:42744105-42743789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr18:43174744-43174431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
206, 199
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr18:51874332-51874656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr18:51400892-51401226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr18:43119795-43119434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 301
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr18:42744189-42743793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 366
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr18:44397911-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr18:43048704-43048273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
363, 355
               

               
Conread position:
               
1-477
               

               
Cow position:
               
chr18:43093226-43092752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
113, 107
               

               
Conread position:
               
1-478
               

               
Cow position:
               
chr18:42674877-42674400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 113
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr18:53635348-53634860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
113, 104
               

               
Conread position:
               
1-501
               

               
Cow position:
               
chr18:43174996-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 115
               

               
Conread position:
               
1-522
               

               
Cow position:
               
chr18:44253208-44252698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr18:40324440-40323917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
518, 492
               

               
Conread position:
               
1-525
               

               
Cow position:
               
chr18:33092830-33092311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
281, 272
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr18:44398079-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
522, 534
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr18:55066918-55066359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 114
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:42985032-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 23
               

               
Conread position:
               
1-565
               

               
Cow position:
               
chr18:44240285-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 113
               

               
Conread position:
               
1-566
               

               
Cow position:
               
chr18:42837660-42837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 32
               

               
Conread position:
               
1-572
               

               
Cow position:
               
chr18:43022543-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 115
               

               
Conread position:
               
1-574
               

               
Cow position:
               
chr18:41198187-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 109
               

               
Conread position:
               
1-577
               

               
Cow position:
               
chr18:41948904-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 366
               

               
Conread position:
               
1-580
               

               
Cow position:
               
chr18:44184526-44183947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 113
               

               
Conread position:
               
1-582
               

               
Cow position:
               
chr18:33064158-33063576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
1-582
               

               
Cow position:
               
chr18:53560286-53560855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 104
               

               
Conread position:
               
1-586
               

               
Cow position:
               
chr18:55523752-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 103
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr18:52433594-52434185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
585, 0
               

               
Conread position:
               
1-595
               

               
Cow position:
               
chr18:44154259-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
1-599
               

               
Cow position:
               
chr18:33064410-33063812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 127
               

               
Conread position:
               
1-599
               

               
Cow position:
               
chr18:41197851-41198449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 109
               

               
Conread position:
               
1-599
               

               
Cow position:
               
chr18:44154007-44153428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 30
               

               
Conread position:
               
1-606
               

               
Cow position:
               
chr18:33064914-33064309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 106
               

               
Conread position:
               
1-606
               

               
Cow position:
               
chr18:42837744-42837139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 112
               

               
Conread position:
               
1-606
               

               
Cow position:
               
chr18:51765554-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
1-607
               

               
Cow position:
               
chr18:40324860-40324254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
1-607
               

               
Cow position:
               
chr18:51367906-51367301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
1-607
               

               
Cow position:
               
chr18:51368326-51367721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 278
               

               
Conread position:
               
1-607
               

               
Cow position:
               
chr18:54967812-54968416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
27, 39
               

               
Conread position:
               
1-608
               

               
Cow position:
               
chr18:41197599-41198206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 109
               

               
Conread position:
               
1-608
               

               
Cow position:
               
chr18:43175164-43174557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 115
               

               
Conread position:
               
1-608
               

               
Cow position:
               
chr18:44253447-44252861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr18:40086072-40085459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 66
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr18:51789533-51788916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 104
               

               
Conread position:
               
1-618
               

               
Cow position:
               
chr18:51812692-51812075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 211
               

               
Conread position:
               
1-628
               

               
Cow position:
               
chr18:41197935-41198562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 112
               

               
Conread position:
               
1-632
               

               
Cow position:
               
chr18:40086912-40086279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 113
               

               
Conread position:
               
1-632
               

               
Cow position:
               
chr18:42744525-42743894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 112
               

               
Conread position:
               
1-633
               

               
Cow position:
               
chr18:56493868-56494500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
1-635
               

               
Cow position:
               
chr18:52427573-52428207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
1-635
               

               
Cow position:
               
chr18:52428161-52428795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
1-635
               

               
Cow position:
               
chr18:52433174-52433808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 104
               

               
Conread position:
               
1-635
               

               
Cow position:
               
chr18:52433342-52433976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:42744441-42743806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 182
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:44239865-44240500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 110
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:56330079-56329444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 127
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chr18:56433911-56434536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 27
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:42790988-42791624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 187
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:42791576-42792212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 104
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:43175500-43174864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 115
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:44253783-44253160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:51368579-51367942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 524
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:53560118-53560754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 105
               

               
Conread position:
               
1-637
               

               
Cow position:
               
chr18:53586807-53586171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 198
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:40086828-40086191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:40306193-40306830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 105
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:40306277-40306914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
113, 107
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:40324692-40324055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 366
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:41197683-41198320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
531, 522
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:41948988-41948351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
518, 530
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:41949072-41948435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:41949240-41948603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
526, 538
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:42675129-42674492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 357
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:42960191-42959563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:42985284-42984647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:42985368-42984731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
516, 531
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:42985452-42984815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 441
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43022711-43022074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43022795-43022158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
618, 610
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43022963-43022326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 113
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43023047-43022410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 370
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43093478-43092841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 284
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43093970-43093345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 113
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43120215-43119578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43120383-43119746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
598
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43175248-43174611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 367
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43175332-43174695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 366
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:43175584-43174947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 31
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:44184778-44184141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 200
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:44184862-44184225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:44240033-44240670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 366
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:44240117-44240754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:44398247-44397610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:56316157-56316794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 113
               

               
Conread position:
               
1-638
               

               
Cow position:
               
chr18:56330163-56329526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 179
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr18:42674792-42674393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
2-595
               

               
Cow position:
               
chr18:44253291-44252709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 112
               

               
Conread position:
               
2-599
               

               
Cow position:
               
chr18:41198020-41198617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
2-599
               

               
Cow position:
               
chr18:44253946-44253354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
2-600
               

               
Cow position:
               
chr18:43120046-43119448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
590, 584
               

               
Conread position:
               
2-600
               

               
Cow position:
               
chr18:56248134-56247526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 231
               

               
Conread position:
               
2-605
               

               
Cow position:
               
chr18:42790905-42791508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
2-606
               

               
Cow position:
               
chr18:43120130-43119527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 18
               

               
Conread position:
               
2-606
               

               
Cow position:
               
chr18:54993433-54994033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
103, 112
               

               
Conread position:
               
2-638
               

               
Cow position:
               
chr18:42744692-42744056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 112
               

               
Conread position:
               
2-638
               

               
Cow position:
               
chr18:42791997-42792633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
346, 364
               

               
Conread position:
               
3-508
               

               
Cow position:
               
chr18:14453262-14452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr18:51969535-51970043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
3-573
               

               
Cow position:
               
chr18:42744355-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 120
               

               
Conread position:
               
3-599
               

               
Cow position:
               
chr18:54993350-54993944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 105
               

               
Conread position:
               
3-607
               

               
Cow position:
               
chr18:51969367-51969960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 247
               

               
Conread position:
               
3-635
               

               
Cow position:
               
chr18:52427911-52428543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 193
               

               
Conread position:
               
3-638
               

               
Cow position:
               
chr18:42837910-42837275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
640
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
3-638
               

               
Cow position:
               
chr18:42985198-42984563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 109
               

               
Conread position:
               
3-638
               

               
Cow position:
               
chr18:44239951-44240586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
465
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 272
               

               
Conread position:
               
6-476
               

               
Cow position:
               
chr18:43168073-43168543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
341, 363
               

               
Conread position:
               
6-607
               

               
Cow position:
               
chr18:51765885-51765284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 155
               

               
Conread position:
               
6-635
               

               
Cow position:
               
chr18:52446885-52447514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
340, 355
               

               
Conread position:
               
6-638
               

               
Cow position:
               
chr18:40086151-40085513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 145
               

               
Conread position:
               
6-638
               

               
Cow position:
               
chr18:41197520-41198152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 10
               

               
Conread position:
               
6-638
               

               
Cow position:
               
chr18:51765717-51765085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 24
               

               
Conread position:
               
7-486
               

               
Cow position:
               
chr18:44397988-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
420, 7
               

               
Conread position:
               
7-607
               

               
Cow position:
               
chr18:42960016-42959426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
7-625
               

               
Cow position:
               
chr18:1417865-1418482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 12
               

               
Conread position:
               
7-632
               

               
Cow position:
               
chr18:53559789-53560413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 33
               

               
Conread position:
               
7-637
               

               
Cow position:
               
chr18:44254024-44253399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 30
               

               
Conread position:
               
7-638
               

               
Cow position:
               
chr18:33064571-33063941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 7
               

               
Conread position:
               
7-638
               

               
Cow position:
               
chr18:42791079-42791709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 7
               

               
Conread position:
               
7-638
               

               
Cow position:
               
chr18:44184687-44184057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
7-638
               

               
Cow position:
               
chr18:44239788-44240418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
456, 7
               

               
Conread position:
               
9-525
               

               
Cow position:
               
chr18:51367730-51367215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
9-638
               

               
Cow position:
               
chr18:43167488-43168117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
14-638
               

               
Cow position:
               
chr18:42675200-42674576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
522, 514
               

               
Conread position:
               
14-638
               

               
Cow position:
               
chr18:43120286-43119662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
441, 421
               

               
Conread position:
               
15-636
               

               
Cow position:
               
chr18:52432937-52433557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
16-624
               

               
Cow position:
               
chr18:51812929-51812321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
16-637
               

               
Cow position:
               
chr18:42675030-42674409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 103
               

               
Conread position:
               
27-342
               

               
Cow position:
               
chr18:44153580-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
267, 0
               

               
Conread position:
               
30-607
               

               
Cow position:
               
chr18:42792109-42792686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
349, 322
               

               
Conread position:
               
30-635
               

               
Cow position:
               
chr18:51789756-51789151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 89
               

               
Conread position:
               
30-636
               

               
Cow position:
               
chr18:41949127-41948521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
489, 507
               

               
Conread position:
               
30-638
               

               
Cow position:
               
chr18:43022850-43022242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
425, 420
               

               
Conread position:
               
31-418
               

               
Cow position:
               
chr18:1418224-1418611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
316, 339
               

               
Conread position:
               
31-637
               

               
Cow position:
               
chr18:33064297-33063690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
32-593
               

               
Cow position:
               
chr18:50059316-50058755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
314, 324
               

               
Conread position:
               
32-608
               

               
Cow position:
               
chr18:44154313-44153743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 325
               

               
Conread position:
               
32-624
               

               
Cow position:
               
chr18:51969078-51969650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
32-635
               

               
Cow position:
               
chr18:42960244-42959650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 27
               

               
Conread position:
               
32-637
               

               
Cow position:
               
chr18:33065051-33064446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 82
               

               
Conread position:
               
32-638
               

               
Cow position:
               
chr18:14453965-14453359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
34-638
               

               
Cow position:
               
chr18:42744576-42743972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 73
               

               
Conread position:
               
35-328
               

               
Cow position:
               
chr18:43053483-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
35-338
               

               
Cow position:
               
chr18:56247343-56247043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
35-415
               

               
Cow position:
               
chr18:52448006-52448387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 0
               

               
Conread position:
               
35-522
               

               
Cow position:
               
chr18:51812406-51811919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 54
               

               
Conread position:
               
35-572
               

               
Cow position:
               
chr18:40075165-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 164
               

               
Conread position:
               
35-581
               

               
Cow position:
               
chr18:42792366-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 87
               

               
Conread position:
               
35-593
               

               
Cow position:
               
chr18:52428447-52429004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
551, 0
               

               
Conread position:
               
35-599
               

               
Cow position:
               
chr18:50099705-50100269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 166
               

               
Conread position:
               
35-599
               

               
Cow position:
               
chr18:50245799-50246363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
35-599
               

               
Cow position:
               
chr18:50250895-50251453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 24
               

               
Conread position:
               
35-600
               

               
Cow position:
               
chr18:50048997-50048431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
35-600
               

               
Cow position:
               
chr18:50246219-50246785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 251
               

               
Conread position:
               
35-605
               

               
Cow position:
               
chr18:40306563-40307133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 93
               

               
Conread position:
               
35-605
               

               
Cow position:
               
chr18:52012467-52011899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 20
               

               
Conread position:
               
35-635
               

               
Cow position:
               
chr18:52447166-52447766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
35-636
               

               
Cow position:
               
chr18:52447418-52448019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
496, 489
               

               
Conread position:
               
35-636
               

               
Cow position:
               
chr18:53636070-53635469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-636
               

               
Cow position:
               
chr18:56128095-56128696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 87
               

               
Conread position:
               
35-637
               

               
Cow position:
               
chr18:43167934-43168536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
35-637
               

               
Cow position:
               
chr18:52447754-52448357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 331
               

               
Conread position:
               
35-637
               

               
Cow position:
               
chr18:53509380-53509982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 173
               

               
Conread position:
               
35-637
               

               
Cow position:
               
chr18:53525834-53526436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 166
               

               
Conread position:
               
35-637
               

               
Cow position:
               
chr18:53587109-53586507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:41949290-41948687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:42675347-42674744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
574, 582
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:42675431-42674828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:42744740-42744140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:42985502-42984899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 242
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:43120676-43120082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:44184576-44183973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 334
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:44184912-44184309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 334
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:44239731-44240334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 413
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:44254081-44253482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 81
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:44398129-44397526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:44398381-44397778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 252
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:49022620-49023223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:49032652-49032049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
582, 574
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:52428279-52428882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 327
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:52428363-52428966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 327
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:52433460-52434063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 327
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:52433544-52434147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 327
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:52447082-52447685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 277
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:52447334-52447937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:52447502-52448105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
607
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
504, 489
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:52447586-52448189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 78
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:52447670-52448273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
609
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 321
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:53498027-53498633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
618
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
35-638
               

               
Cow position:
               
chr18:53509296-53509899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
610
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 72
               

               
Conread position:
               
36-621
               

               
Cow position:
               
chr18:50059732-50059146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 330
               

               
Conread position:
               
36-638
               

               
Cow position:
               
chr18:33064795-33064193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 176
               

               
Conread position:
               
37-566
               

               
Cow position:
               
chr18:56329371-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
37-576
               

               
Cow position:
               
chr18:50271605-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 329
               

               
Conread position:
               
37-599
               

               
Cow position:
               
chr18:50030925-50030361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
37-607
               

               
Cow position:
               
chr18:51812824-51812254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 314
               

               
Conread position:
               
37-607
               

               
Cow position:
               
chr18:52427777-52428347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 333
               

               
Conread position:
               
37-624
               

               
Cow position:
               
chr18:51400340-51400927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
37-624
               

               
Cow position:
               
chr18:51789665-51789078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 248
               

               
Conread position:
               
37-635
               

               
Cow position:
               
chr18:40306733-40307331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
37-635
               

               
Cow position:
               
chr18:51812992-51812394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
37-635
               

               
Cow position:
               
chr18:52433126-52433724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 325
               

               
Conread position:
               
37-638
               

               
Cow position:
               
chr18:41949372-41948771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 77
               

               
Conread position:
               
37-638
               

               
Cow position:
               
chr18:50022259-50021652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
139, 145
               

               
Conread position:
               
37-638
               

               
Cow position:
               
chr18:50049079-50048478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
39-418
               

               
Cow position:
               
chr18:53586265-53585886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
67, 77
               

               
Conread position:
               
39-600
               

               
Cow position:
               
chr18:49033320-49032759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 87
               

               
Conread position:
               
39-605
               

               
Cow position:
               
chr18:33092960-33092400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
496, 485
               

               
Conread position:
               
39-617
               

               
Cow position:
               
chr18:40075001-40075579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 331
               

               
Conread position:
               
39-637
               

               
Cow position:
               
chr18:42960069-42959480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 0
               

               
Conread position:
               
39-638
               

               
Cow position:
               
chr18:40086284-40085694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 67
               

               
Conread position:
               
39-638
               

               
Cow position:
               
chr18:42837958-42837359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
500, 485
               

               
Conread position:
               
39-638
               

               
Cow position:
               
chr18:44398293-44397694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
496, 487
               

               
Conread position:
               
40-392
               

               
Cow position:
               
chr18:50021747-50021394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
41-521
               

               
Cow position:
               
chr18:50083766-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 165
               

               
Conread position:
               
41-521
               

               
Cow position:
               
chr18:55008877-55009353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
41-521
               

               
Cow position:
               
chr18:56247581-56247111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
41-604
               

               
Cow position:
               
chr18:50246057-50246620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
328, 308
               

               
Conread position:
               
41-609
               

               
Cow position:
               
chr18:43023091-43022523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
478, 489
               

               
Conread position:
               
41-624
               

               
Cow position:
               
chr18:54979540-54980123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
41-627
               

               
Cow position:
               
chr18:55018112-55018699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
41-637
               

               
Cow position:
               
chr18:42791448-42792044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 64
               

               
Conread position:
               
41-637
               

               
Cow position:
               
chr18:44253336-44252751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
41-638
               

               
Cow position:
               
chr18:51368706-51368109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
41-638
               

               
Cow position:
               
chr18:54967015-54967612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
477, 494
               

               
Conread position:
               
41-638
               

               
Cow position:
               
chr18:54979792-54980389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 65
               

               
Conread position:
               
42-437
               

               
Cow position:
               
chr18:50251148-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
218, 243
               

               
Conread position:
               
42-489
               

               
Cow position:
               
chr18:50295421-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 68
               

               
Conread position:
               
42-498
               

               
Cow position:
               
chr18:50099880-50100335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
42-509
               

               
Cow position:
               
chr18:50048654-50048193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
85, 81
               

               
Conread position:
               
42-515
               

               
Cow position:
               
chr18:51839328-51838855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
42-521
               

               
Cow position:
               
chr18:51789156-51788677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 147
               

               
Conread position:
               
42-560
               

               
Cow position:
               
chr18:22634705-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
162, 147
               

               
Conread position:
               
42-560
               

               
Cow position:
               
chr18:53635391-53634875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 358
               

               
Conread position:
               
42-575
               

               
Cow position:
               
chr18:1418067-1418600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 343
               

               
Conread position:
               
42-599
               

               
Cow position:
               
chr18:43093521-43092964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 141
               

               
Conread position:
               
42-599
               

               
Cow position:
               
chr18:50059138-50058581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
481, 491
               

               
Conread position:
               
42-599
               

               
Cow position:
               
chr18:50099124-50099681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 243
               

               
Conread position:
               
42-599
               

               
Cow position:
               
chr18:50099544-50100101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
42-606
               

               
Cow position:
               
chr18:50021999-50021429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
145, 153
               

               
Conread position:
               
42-606
               

               
Cow position:
               
chr18:50099628-50100195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 17
               

               
Conread position:
               
42-606
               

               
Cow position:
               
chr18:55018029-55018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 73
               

               
Conread position:
               
42-607
               

               
Cow position:
               
chr18:33064621-33064056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 322
               

               
Conread position:
               
42-607
               

               
Cow position:
               
chr18:50848484-50849049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
497, 478
               

               
Conread position:
               
42-607
               

               
Cow position:
               
chr18:54967184-54967745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
42-608
               

               
Cow position:
               
chr18:33093041-33092475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
42-608
               

               
Cow position:
               
chr18:41197808-41198374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
42-608
               

               
Cow position:
               
chr18:55008708-55009274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
42-610
               

               
Cow position:
               
chr18:51367782-51367214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 158
               

               
Conread position:
               
42-632
               

               
Cow position:
               
chr18:53559991-53560581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 64
               

               
Conread position:
               
42-635
               

               
Cow position:
               
chr18:51766017-51765424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
42-636
               

               
Cow position:
               
chr18:44240242-44240836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
42-636
               

               
Cow position:
               
chr18:50049160-50048564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
42-636
               

               
Cow position:
               
chr18:56128354-56128948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
42-637
               

               
Cow position:
               
chr18:40075088-40075683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 241
               

               
Conread position:
               
42-637
               

               
Cow position:
               
chr18:42985075-42984480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 325
               

               
Conread position:
               
42-637
               

               
Cow position:
               
chr18:43022586-43021991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 325
               

               
Conread position:
               
42-637
               

               
Cow position:
               
chr18:43167857-43168452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 219
               

               
Conread position:
               
42-637
               

               
Cow position:
               
chr18:50848820-50849415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 313
               

               
Conread position:
               
42-637
               

               
Cow position:
               
chr18:51367949-51367355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 81
               

               
Conread position:
               
42-638
               

               
Cow position:
               
chr18:42675589-42674996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 20
               

               
Conread position:
               
44-596
               

               
Cow position:
               
chr18:33093123-33092571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 319
               

               
Conread position:
               
45-438
               

               
Cow position:
               
chr18:54980300-54980691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
63, 73
               

               
Conread position:
               
45-440
               

               
Cow position:
               
chr18:51969659-51970045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
45-465
               

               
Cow position:
               
chr18:50849075-50849495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
45-479
               

               
Cow position:
               
chr18:49022882-49023316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
45-493
               

               
Cow position:
               
chr18:50021828-50021377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
93, 324
               

               
Conread position:
               
45-507
               

               
Cow position:
               
chr18:51839241-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
45-512
               

               
Cow position:
               
chr18:56316369-56316836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
69, 64
               

               
Conread position:
               
45-521
               

               
Cow position:
               
chr18:42827472-42827953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 310
               

               
Conread position:
               
45-521
               

               
Cow position:
               
chr18:50848991-50849468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
69, 60
               

               
Conread position:
               
45-524
               

               
Cow position:
               
chr18:14454036-14453557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 418
               

               
Conread position:
               
45-530
               

               
Cow position:
               
chr18:51838551-51838075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
45-596
               

               
Cow position:
               
chr18:54993308-54993859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 322
               

               
Conread position:
               
45-599
               

               
Cow position:
               
chr18:22634624-22635178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
45-599
               

               
Cow position:
               
chr18:42960315-42959761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
45-599
               

               
Cow position:
               
chr18:50083350-50083904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
45-599
               

               
Cow position:
               
chr18:50271445-50271999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 156
               

               
Conread position:
               
45-599
               

               
Cow position:
               
chr18:51789237-51788683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
45-599
               

               
Cow position:
               
chr18:51812480-51811926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
45-599
               

               
Cow position:
               
chr18:56434113-56434668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
247, 220
               

               
Conread position:
               
45-600
               

               
Cow position:
               
chr18:56316117-56316672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 69
               

               
Conread position:
               
45-605
               

               
Cow position:
               
chr18:50083266-50083826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
83, 78
               

               
Conread position:
               
45-605
               

               
Cow position:
               
chr18:50271529-50272090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
45-606
               

               
Cow position:
               
chr18:50099043-50099604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
45-606
               

               
Cow position:
               
chr18:51752099-51751537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
517, 527
               

               
Conread position:
               
45-606
               

               
Cow position:
               
chr18:51752183-51751622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 144
               

               
Conread position:
               
45-607
               

               
Cow position:
               
chr18:42791368-42791930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
478, 491
               

               
Conread position:
               
45-607
               

               
Cow position:
               
chr18:44154470-44153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 155
               

               
Conread position:
               
45-607
               

               
Cow position:
               
chr18:51789573-51789011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 306
               

               
Conread position:
               
45-608
               

               
Cow position:
               
chr18:40324480-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
45-608
               

               
Cow position:
               
chr18:54966935-54967498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
82, 74
               

               
Conread position:
               
45-618
               

               
Cow position:
               
chr18:51789405-51788832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 167
               

               
Conread position:
               
45-623
               

               
Cow position:
               
chr18:50059555-50058977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 236
               

               
Conread position:
               
45-624
               

               
Cow position:
               
chr18:51812732-51812153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
45-625
               

               
Cow position:
               
chr18:44153886-44153318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 145
               

               
Conread position:
               
45-629
               

               
Cow position:
               
chr18:51874131-51874708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
45-629
               

               
Cow position:
               
chr18:55018284-55018870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 156
               

               
Conread position:
               
45-632
               

               
Cow position:
               
chr18:42675253-42674666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 318
               

               
Conread position:
               
45-636
               

               
Cow position:
               
chr18:54967940-54968529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 74
               

               
Conread position:
               
45-637
               

               
Cow position:
               
chr18:56247661-56247079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
551, 160
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:33064450-33063857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:42791788-42792381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:42792292-42792885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
418, 412
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:42960393-42959806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:42985576-42984983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
577, 565
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:49032810-49032217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 138
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:53559910-53560503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 60
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:54992972-54993565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 79
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:54993140-54993733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
45-638
               

               
Cow position:
               
chr18:56434197-56434789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
162, 167
               

               
Conread position:
               
46-417
               

               
Cow position:
               
chr18:53586342-53585971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-479
               

               
Cow position:
               
chr18:53498545-53498979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
46-480
               

               
Cow position:
               
chr18:49032473-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 77
               

               
Conread position:
               
46-481
               

               
Cow position:
               
chr18:55066789-55066354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
66, 73
               

               
Conread position:
               
46-521
               

               
Cow position:
               
chr18:50058882-50058409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 241
               

               
Conread position:
               
46-582
               

               
Cow position:
               
chr18:50848908-50849444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 282
               

               
Conread position:
               
46-599
               

               
Cow position:
               
chr18:50083687-50084240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 239
               

               
Conread position:
               
46-599
               

               
Cow position:
               
chr18:50098960-50099513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 314
               

               
Conread position:
               
46-599
               

               
Cow position:
               
chr18:50099464-50100017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 239
               

               
Conread position:
               
46-599
               

               
Cow position:
               
chr18:55523545-55524098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
46-605
               

               
Cow position:
               
chr18:50848236-50848795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
301, 319
               

               
Conread position:
               
46-607
               

               
Cow position:
               
chr18:54967773-54968332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
46-608
               

               
Cow position:
               
chr18:53525929-53526489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
46-635
               

               
Cow position:
               
chr18:55067041-55066452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
46-636
               

               
Cow position:
               
chr18:40074924-40075514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 66
               

               
Conread position:
               
46-636
               

               
Cow position:
               
chr18:49033145-49032555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
46-637
               

               
Cow position:
               
chr18:42792209-42792800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
492, 478
               

               
Conread position:
               
46-637
               

               
Cow position:
               
chr18:49032725-49032134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
46-637
               

               
Cow position:
               
chr18:53587014-53586423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
46-637
               

               
Cow position:
               
chr18:55066957-55066366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
46-638
               

               
Cow position:
               
chr18:42694063-42693471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
68, 61
               

               
Conread position:
               
46-638
               

               
Cow position:
               
chr18:43175698-43175115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 112
               

               
Conread position:
               
46-638
               

               
Cow position:
               
chr18:50295257-50295849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 96
               

               
Conread position:
               
46-638
               

               
Cow position:
               
chr18:53586846-53586254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
47-637
               

               
Cow position:
               
chr18:43094091-43093514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 66
               

               
Conread position:
               
47-638
               

               
Cow position:
               
chr18:50022078-50021484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
48-636
               

               
Cow position:
               
chr18:40086949-40086359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 60
               

               
Conread position:
               
48-638
               

               
Cow position:
               
chr18:44154380-44153797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 66
               

               
Conread position:
               
48-638
               

               
Cow position:
               
chr18:55008630-55009220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
49-348
               

               
Cow position:
               
chr18:52011867-52011568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 56
               

               
Conread position:
               
49-419
               

               
Cow position:
               
chr18:51970411-51970774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
241, 134
               

               
Conread position:
               
49-479
               

               
Cow position:
               
chr18:40306913-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
49-494
               

               
Cow position:
               
chr18:56316457-56316902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
318, 301
               

               
Conread position:
               
49-523
               

               
Cow position:
               
chr18:43048740-43048267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
49-562
               

               
Cow position:
               
chr18:49022802-49023315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
49-571
               

               
Cow position:
               
chr18:56434453-56434975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
49-599
               

               
Cow position:
               
chr18:41198151-41198701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
49-599
               

               
Cow position:
               
chr18:50295175-50295726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 301
               

               
Conread position:
               
49-608
               

               
Cow position:
               
chr18:1417990-1418549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 179
               

               
Conread position:
               
49-608
               

               
Cow position:
               
chr18:53560082-53560641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
49-618
               

               
Cow position:
               
chr18:54992892-54993461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 234
               

               
Conread position:
               
49-624
               

               
Cow position:
               
chr18:51752263-51751688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 10
               

               
Conread position:
               
49-632
               

               
Cow position:
               
chr18:51368362-51367780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 307
               

               
Conread position:
               
49-635
               

               
Cow position:
               
chr18:51765926-51765340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
468, 484
               

               
Conread position:
               
49-635
               

               
Cow position:
               
chr18:52432886-52433472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
49-636
               

               
Cow position:
               
chr18:52427537-52428124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
470, 489
               

               
Conread position:
               
49-636
               

               
Cow position:
               
chr18:54979632-54980219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
49-637
               

               
Cow position:
               
chr18:55523380-55523968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 238
               

               
Conread position:
               
49-638
               

               
Cow position:
               
chr18:33064194-33063605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
49-638
               

               
Cow position:
               
chr18:51400604-51401193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 150
               

               
Conread position:
               
49-638
               

               
Cow position:
               
chr18:53586675-53586086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 98
               

               
Conread position:
               
49-638
               

               
Cow position:
               
chr18:54967443-54968029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 254
               

               
Conread position:
               
49-638
               

               
Cow position:
               
chr18:55018204-55018794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 65
               

               
Conread position:
               
50-560
               

               
Cow position:
               
chr18:50021907-50021394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 61
               

               
Conread position:
               
50-600
               

               
Cow position:
               
chr18:52012118-52011568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
50-635
               

               
Cow position:
               
chr18:52447265-52447850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 65
               

               
Conread position:
               
51-607
               

               
Cow position:
               
chr18:51839487-51838931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
51-625
               

               
Cow position:
               
chr18:43093596-43093022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
51-638
               

               
Cow position:
               
chr18:43120576-43119998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
52-408
               

               
Cow position:
               
chr18:56128952-56129306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 54
               

               
Conread position:
               
52-598
               

               
Cow position:
               
chr18:54993063-54993609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 65
               

               
Conread position:
               
52-610
               

               
Cow position:
               
chr18:40306412-40306970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
52-633
               

               
Cow position:
               
chr18:53636137-53635556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
467, 485
               

               
Conread position:
               
52-633
               

               
Cow position:
               
chr18:56128028-56128609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
158, 153
               

               
Conread position:
               
52-633
               

               
Cow position:
               
chr18:56128280-56128861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
75, 63
               

               
Conread position:
               
52-638
               

               
Cow position:
               
chr18:49022303-49022887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
94, 98
               

               
Conread position:
               
53-607
               

               
Cow position:
               
chr18:54980056-54980609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 61
               

               
Conread position:
               
53-608
               

               
Cow position:
               
chr18:53509230-53509785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
53-608
               

               
Cow position:
               
chr18:53525684-53526239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 56
               

               
Conread position:
               
53-632
               

               
Cow position:
               
chr18:40306161-40306740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
54-490
               

               
Cow position:
               
chr18:14453295-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 56
               

               
Conread position:
               
54-625
               

               
Cow position:
               
chr18:53610558-53609987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 7
               

               
Conread position:
               
55-638
               

               
Cow position:
               
chr18:51368020-51367438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 128
               

               
Conread position:
               
55-638
               

               
Cow position:
               
chr18:53498305-53498888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
57-638
               

               
Cow position:
               
chr18:43120411-43119830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 480
               

               
Conread position:
               
59-638
               

               
Cow position:
               
chr18:40324886-40324307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
460, 472
               

               
Conread position:
               
60-605
               

               
Cow position:
               
chr18:51400531-51401076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 223
               

               
Conread position:
               
60-632
               

               
Cow position:
               
chr18:53498136-53498711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
61-606
               

               
Cow position:
               
chr18:51766082-51765537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
61-638
               

               
Cow position:
               
chr18:44398440-44397862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
61-638
               

               
Cow position:
               
chr18:56315964-56316542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
62-608
               

               
Cow position:
               
chr18:52012190-52011644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
57, 49
               

               
Conread position:
               
62-636
               

               
Cow position:
               
chr18:56329850-56329276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 53
               

               
Conread position:
               
63-600
               

               
Cow position:
               
chr18:49022732-49023270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 187
               

               
Conread position:
               
63-607
               

               
Cow position:
               
chr18:50281675-50282220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
64-489
               

               
Cow position:
               
chr18:49021738-49022164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 55
               

               
Conread position:
               
64-521
               

               
Cow position:
               
chr18:50048800-50048343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
64-521
               

               
Cow position:
               
chr18:50246332-50246789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
133, 139
               

               
Conread position:
               
64-553
               

               
Cow position:
               
chr18:56128796-56129283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
336, 0
               

               
Conread position:
               
64-560
               

               
Cow position:
               
chr18:53610044-53609544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
64-579
               

               
Cow position:
               
chr18:42827407-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 43
               

               
Conread position:
               
64-591
               

               
Cow position:
               
chr18:14453849-14453319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
64-599
               

               
Cow position:
               
chr18:50059452-50058917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 95
               

               
Conread position:
               
64-599
               

               
Cow position:
               
chr18:50099230-50099765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
64-608
               

               
Cow position:
               
chr18:51838783-51838244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
290, 198
               

               
Conread position:
               
64-612
               

               
Cow position:
               
chr18:50251005-50251549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
61, 48
               

               
Conread position:
               
64-636
               

               
Cow position:
               
chr18:53635789-53635217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 46
               

               
Conread position:
               
64-637
               

               
Cow position:
               
chr18:49032959-49032386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-637
               

               
Cow position:
               
chr18:49033211-49032638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
64-637
               

               
Cow position:
               
chr18:50281761-50282334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:33064935-33064361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 216
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:42693709-42693136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
284, 292
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:43167795-43168369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 292
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:50245996-50246570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 48
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:53525779-53526353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:53610296-53609722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:53635621-53635047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 219
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:56128544-56129118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 298
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:56329428-56328854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 221
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:56329680-56329106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
471, 464
               

               
Conread position:
               
64-638
               

               
Cow position:
               
chr18:56330184-56329610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
210, 221
               

               
Conread position:
               
67-481
               

               
Cow position:
               
chr18:51765320-51764906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 284
               

               
Conread position:
               
67-524
               

               
Cow position:
               
chr18:51765404-51764947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 187
               

               
Conread position:
               
67-635
               

               
Cow position:
               
chr18:52447030-52447598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
67-636
               

               
Cow position:
               
chr18:50031060-50030489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 42
               

               
Conread position:
               
67-638
               

               
Cow position:
               
chr18:49021327-49021892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
130, 113
               

               
Conread position:
               
68-638
               

               
Cow position:
               
chr18:56247808-56247244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
70-608
               

               
Cow position:
               
chr18:51789884-51789346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
70-623
               

               
Cow position:
               
chr18:51813043-51812490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
70-638
               

               
Cow position:
               
chr18:56329590-56329022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
70-638
               

               
Cow position:
               
chr18:56493853-56494421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
71-638
               

               
Cow position:
               
chr18:50022564-50021991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
73-638
               

               
Cow position:
               
chr18:55008571-55009136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 33
               

               
Conread position:
               
73-638
               

               
Cow position:
               
chr18:55017892-55018457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
74-638
               

               
Cow position:
               
chr18:50848099-50848660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 38
               

               
Conread position:
               
74-638
               

               
Cow position:
               
chr18:56248225-56247656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
281, 33
               

               
Conread position:
               
76-638
               

               
Cow position:
               
chr18:1417849-1418411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
437, 460
               

               
Conread position:
               
77-635
               

               
Cow position:
               
chr18:52427733-52428291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 200
               

               
Conread position:
               
77-635
               

               
Cow position:
               
chr18:52433082-52433640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 200
               

               
Conread position:
               
79-638
               

               
Cow position:
               
chr18:53559692-53560251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 27
               

               
Conread position:
               
87-638
               

               
Cow position:
               
chr18:49022422-49022971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
88-599
               

               
Cow position:
               
chr18:51400307-51400818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 261
               

               
Conread position:
               
88-600
               

               
Cow position:
               
chr18:50059344-50058831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 0
               

               
Conread position:
               
88-605
               

               
Cow position:
               
chr18:50022376-50021856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
256, 274
               

               
Conread position:
               
88-635
               

               
Cow position:
               
chr18:43093724-43093180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
88-638
               

               
Cow position:
               
chr18:51839534-51838984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
88-638
               

               
Cow position:
               
chr18:55067083-55066533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
88-638
               

               
Cow position:
               
chr18:55523335-55523885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
108-638
               

               
Cow position:
               
chr18:41949385-41948855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
113-600
               

               
Cow position:
               
chr18:53635488-53635002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 99
               

               
Conread position:
               
113-600
               

               
Cow position:
               
chr18:56128677-56129163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
86, 97
               

               
Conread position:
               
113-638
               

               
Cow position:
               
chr18:44398552-44398030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 42
               

               
Conread position:
               
115-607
               

               
Cow position:
               
chr18:50098945-50099437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 229
               

               
Conread position:
               
118-456
               

               
Cow position:
               
chr18:42959747-42959409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
118-624
               

               
Cow position:
               
chr18:44239730-44240236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 161
               

               
Conread position:
               
118-632
               

               
Cow position:
               
chr18:44184913-44184399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 246
               

               
Conread position:
               
118-636
               

               
Cow position:
               
chr18:51874036-51874547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
118-636
               

               
Cow position:
               
chr18:56329710-56329192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 302
               

               
Conread position:
               
118-637
               

               
Cow position:
               
chr18:42985587-42985068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 324
               

               
Conread position:
               
118-638
               

               
Cow position:
               
chr18:43120677-43120166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 90
               

               
Conread position:
               
118-638
               

               
Cow position:
               
chr18:44154481-44153959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 168
               

               
Conread position:
               
118-638
               

               
Cow position:
               
chr18:52446913-52447433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 33
               

               
Conread position:
               
119-635
               

               
Cow position:
               
chr18:52427523-52428039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 163
               

               
Conread position:
               
119-635
               

               
Cow position:
               
chr18:52432872-52433388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 163
               

               
Conread position:
               
123-638
               

               
Cow position:
               
chr18:14454042-14453527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 238
               

               
Conread position:
               
124-587
               

               
Cow position:
               
chr18:51400763-51401226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 244
               

               
Conread position:
               
124-635
               

               
Cow position:
               
chr18:51752272-51751761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
126-599
               

               
Cow position:
               
chr18:50083683-50084156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 159
               

               
Conread position:
               
127-624
               

               
Cow position:
               
chr18:54966933-54967431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
240, 229
               

               
Conread position:
               
127-636
               

               
Cow position:
               
chr18:56330205-56329696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 225
               

               
Conread position:
               
127-637
               

               
Cow position:
               
chr18:40074921-40075431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 156
               

               
Conread position:
               
127-638
               

               
Cow position:
               
chr18:40086954-40086441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
127-638
               

               
Cow position:
               
chr18:42724522-42724011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
235, 217
               

               
Conread position:
               
127-638
               

               
Cow position:
               
chr18:43167774-43168285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 409
               

               
Conread position:
               
127-638
               

               
Cow position:
               
chr18:50271443-50271954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 239
               

               
Conread position:
               
127-638
               

               
Cow position:
               
chr18:54979458-54979969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
252, 232
               

               
Conread position:
               
127-638
               

               
Cow position:
               
chr18:54992718-54993229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
82, 72
               

               
Conread position:
               
128-638
               

               
Cow position:
               
chr18:22634623-22635133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 133
               

               
Conread position:
               
132-491
               

               
Cow position:
               
chr18:52011868-52011506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
164, 152
               

               
Conread position:
               
132-595
               

               
Cow position:
               
chr18:43048741-43048281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 227
               

               
Conread position:
               
135-636
               

               
Cow position:
               
chr18:33093116-33092615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
136-638
               

               
Cow position:
               
chr18:44398448-44397946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 220
               

               
Conread position:
               
137-599
               

               
Cow position:
               
chr18:42827397-42827858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 6
               

               
Conread position:
               
138-514
               

               
Cow position:
               
chr18:53610054-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
217, 233
               

               
Conread position:
               
138-611
               

               
Cow position:
               
chr18:53635379-53634908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 346
               

               
Conread position:
               
139-624
               

               
Cow position:
               
chr18:53525686-53526172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 144
               

               
Conread position:
               
139-638
               

               
Cow position:
               
chr18:55067116-55066617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 59
               

               
Conread position:
               
139-638
               

               
Cow position:
               
chr18:56329437-56328938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 225
               

               
Conread position:
               
143-581
               

               
Cow position:
               
chr18:14453290-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
144-638
               

               
Cow position:
               
chr18:43120408-43119914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
148-624
               

               
Cow position:
               
chr18:51838783-51838312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
102, 107
               

               
Conread position:
               
149-636
               

               
Cow position:
               
chr18:49033378-49032891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 227
               

               
Conread position:
               
153-455
               

               
Cow position:
               
chr18:51873708-51874010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
155-638
               

               
Cow position:
               
chr18:53559684-53560167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 42
               

               
Conread position:
               
156-625
               

               
Cow position:
               
chr18:51839550-51839081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
156-638
               

               
Cow position:
               
chr18:55523319-55523801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 193
               

               
Conread position:
               
159-636
               

               
Cow position:
               
chr18:53636114-53635637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
159-636
               

               
Cow position:
               
chr18:56128051-56128528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
160-606
               

               
Cow position:
               
chr18:41197506-41197953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
163-599
               

               
Cow position:
               
chr18:50245759-50246195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
109, 124
               

               
Conread position:
               
163-638
               

               
Cow position:
               
chr18:42693862-42693387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
108, 118
               

               
Conread position:
               
163-638
               

               
Cow position:
               
chr18:56433734-56434202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
156, 209
               

               
Conread position:
               
165-414
               

               
Cow position:
               
chr18:43053439-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
171-624
               

               
Cow position:
               
chr18:51766137-51765687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
171-624
               

               
Cow position:
               
chr18:51789948-51789498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
171-624
               

               
Cow position:
               
chr18:51813107-51812657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
179-638
               

               
Cow position:
               
chr18:42960512-42960058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
187-638
               

               
Cow position:
               
chr18:50271419-50271870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
168, 184
               

               
Conread position:
               
194-638
               

               
Cow position:
               
chr18:50083247-50083691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
195-608
               

               
Cow position:
               
chr18:44154488-44154072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 168
               

               
Conread position:
               
195-638
               

               
Cow position:
               
chr18:44184920-44184477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 169
               

               
Conread position:
               
196-599
               

               
Cow position:
               
chr18:50098942-50099345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
149, 174
               

               
Conread position:
               
196-606
               

               
Cow position:
               
chr18:50031099-50030690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
159, 167
               

               
Conread position:
               
200-617
               

               
Cow position:
               
chr18:53498024-53498447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
273, 340
               

               
Conread position:
               
201-637
               

               
Cow position:
               
chr18:52446912-52447348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 155
               

               
Conread position:
               
202-638
               

               
Cow position:
               
chr18:54966924-54967360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
226, 252
               

               
Conread position:
               
202-638
               

               
Cow position:
               
chr18:54979449-54979885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
241, 251
               

               
Conread position:
               
203-607
               

               
Cow position:
               
chr18:51970314-51970710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
339, 63
               

               
Conread position:
               
204-638
               

               
Cow position:
               
chr18:22634533-22634965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 83
               

               
Conread position:
               
205-637
               

               
Cow position:
               
chr18:42790856-42791288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
205-637
               

               
Cow position:
               
chr18:55008453-55008883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
87, 78
               

               
Conread position:
               
206-638
               

               
Cow position:
               
chr18:42985583-42985151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 235
               

               
Conread position:
               
208-606
               

               
Cow position:
               
chr18:54979371-54979769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
49, 40
               

               
Conread position:
               
209-632
               

               
Cow position:
               
chr18:42827384-42827807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
137, 157
               

               
Conread position:
               
210-575
               

               
Cow position:
               
chr18:56264982-56264624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 40
               

               
Conread position:
               
210-637
               

               
Cow position:
               
chr18:43023090-43022663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 223
               

               
Conread position:
               
211-599
               

               
Cow position:
               
chr18:50245723-50246111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
211-638
               

               
Cow position:
               
chr18:40074921-40075348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
211-638
               

               
Cow position:
               
chr18:53587104-53586674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
211-638
               

               
Cow position:
               
chr18:55017778-55018205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
136, 158
               

               
Conread position:
               
212-607
               

               
Cow position:
               
chr18:22634623-22635018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
144, 153
               

               
Conread position:
               
214-638
               

               
Cow position:
               
chr18:53525678-53526101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
133, 7
               

               
Conread position:
               
216-635
               

               
Cow position:
               
chr18:43048741-43048322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
217-637
               

               
Cow position:
               
chr18:33093118-33092698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 13
               

               
Conread position:
               
219-485
               

               
Cow position:
               
chr18:51751344-51751082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
121, 144
               

               
Conread position:
               
222-632
               

               
Cow position:
               
chr18:14453295-14452885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
222-638
               

               
Cow position:
               
chr18:53497965-53498384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
146, 54
               

               
Conread position:
               
235-608
               

               
Cow position:
               
chr18:51969029-51969384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 45
               

               
Conread position:
               
236-638
               

               
Cow position:
               
chr18:40306175-40306578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
5, 130
               

               
Conread position:
               
238-637
               

               
Cow position:
               
chr18:41197500-41197899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 131
               

               
Conread position:
               
244-599
               

               
Cow position:
               
chr18:50098906-50099261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
103, 122
               

               
Conread position:
               
244-605
               

               
Cow position:
               
chr18:50271392-50271753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
111, 126
               

               
Conread position:
               
244-638
               

               
Cow position:
               
chr18:40074873-40075264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
254-498
               

               
Cow position:
               
chr18:43053434-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 117
               

               
Conread position:
               
256-608
               

               
Cow position:
               
chr18:50031123-50030773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 111
               

               
Conread position:
               
270-608
               

               
Cow position:
               
chr18:44239714-44240052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 242
               

               
Conread position:
               
280-638
               

               
Cow position:
               
chr18:51368803-51368445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 99
               

               
Conread position:
               
286-638
               

               
Cow position:
               
chr18:42837963-42837611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 251
               

               
Conread position:
               
286-638
               

               
Cow position:
               
chr18:54992625-54992977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
287-582
               

               
Cow position:
               
chr18:43053483-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
287-636
               

               
Cow position:
               
chr18:40086962-40086616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 75
               

               
Conread position:
               
294-638
               

               
Cow position:
               
chr18:43023090-43022746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 236
               

               
Conread position:
               
295-520
               

               
Cow position:
               
chr18:40087403-40087178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 153
               

               
Conread position:
               
300-638
               

               
Cow position:
               
chr18:43048741-43048403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 69
               

               
Conread position:
               
301-624
               

               
Cow position:
               
chr18:51873689-51874011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
301-638
               

               
Cow position:
               
chr18:33093118-33092781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
9, 13
               

               
Conread position:
               
370-638
               

               
Cow position:
               
chr18:44239730-44239998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
370-638
               

               
Cow position:
               
chr18:53587110-53586842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
374-625
               

               
Cow position:
               
chr18:51400341-51400592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-638
               

               
Cow position:
               
chr18:42827385-42827645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
161, 149
               

               
Conread position:
               
389-636
               

               
Cow position:
               
chr18:40306161-40306408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 147
               

               
Conread position:
               
390-638
               

               
Cow position:
               
chr18:14453295-14453047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
73, 69
               

               
Conread position:
               
406-638
               

               
Cow position:
               
chr18:41197500-41197732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
133, 118
               
Show alignments to all cow chromosomes.