Cow genome map
| Conread name: | ruio32_f18.y1 |
| Conread position: | 1-327 |
| Cow position: | chr19:20678479-20678802 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 210, 201 |
| Conread position: | 1-353 |
| Cow position: | chr19:14940684-14941036 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-477 |
| Cow position: | chr19:23614632-23615108 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 345, 365 |
| Conread position: | 1-556 |
| Cow position: | chr19:23614548-23615103 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 1-593 |
| Cow position: | chr19:14959949-14959373 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 375 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 105, 112 |
| Conread position: | 1-637 |
| Cow position: | chr19:14940264-14940900 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 375 |
| Conread position: | 1-638 |
| Cow position: | chr19:14940096-14940733 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 50 |
| Conread position: | 1-638 |
| Cow position: | chr19:14940180-14940817 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 38 |
| Conread position: | 1-638 |
| Cow position: | chr19:14940348-14940985 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 104 |
| Conread position: | 1-638 |
| Cow position: | chr19:14960033-14959412 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 1-638 |
| Cow position: | chr19:23613876-23614513 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 182 |
| Conread position: | 1-638 |
| Cow position: | chr19:23614044-23614681 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 195 |
| Conread position: | 1-638 |
| Cow position: | chr19:23614296-23614933 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 365 |
| Conread position: | 1-638 |
| Cow position: | chr19:23614380-23615017 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 88 |
| Conread position: | 1-638 |
| Cow position: | chr19:23649746-23650383 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 6-636 |
| Cow position: | chr19:23613629-23614259 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 255 |
| Conread position: | 6-638 |
| Cow position: | chr19:23614469-23615101 (view UCSC Genome Browser custom track) |
| Alignm length: | 637 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 108 |
| Conread position: | 7-395 |
| Cow position: | chr19:43570025-43569642 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 371, 7 |
| Conread position: | 7-514 |
| Cow position: | chr19:23650005-23650509 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-595 |
| Cow position: | chr19:23613799-23614386 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 12 |
| Conread position: | 7-637 |
| Cow position: | chr19:23614135-23614764 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 28 |
| Conread position: | 7-638 |
| Cow position: | chr19:23613715-23614345 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 7 |
| Conread position: | 21-607 |
| Cow position: | chr19:14915842-14916420 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 368 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 57, 67 |
| Conread position: | 30-314 |
| Cow position: | chr19:14959111-14958827 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 262, 247 |
| Conread position: | 30-638 |
| Cow position: | chr19:14960422-14959816 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 32 |
| Conread position: | 35-409 |
| Cow position: | chr19:23597339-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 87, 93 |
| Conread position: | 35-524 |
| Cow position: | chr19:43570166-43569681 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 433, 0 |
| Conread position: | 35-600 |
| Cow position: | chr19:23613490-23614055 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 312, 331 |
| Conread position: | 35-636 |
| Cow position: | chr19:23649864-23650465 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 84 |
| Conread position: | 35-638 |
| Cow position: | chr19:14940466-14941069 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 501, 488 |
| Conread position: | 35-638 |
| Cow position: | chr19:14959677-14959091 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 29 |
| Conread position: | 39-627 |
| Cow position: | chr19:23613410-23613998 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 144 |
| Conread position: | 41-637 |
| Cow position: | chr19:23649366-23649962 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-638 |
| Cow position: | chr19:23649450-23650047 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 327 |
| Conread position: | 42-498 |
| Cow position: | chr19:23597262-23597718 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 42-608 |
| Cow position: | chr19:14960326-14959764 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 42-625 |
| Cow position: | chr19:23614253-23614836 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 209 |
| Conread position: | 45-347 |
| Cow position: | chr19:14948315-14948013 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 45-564 |
| Cow position: | chr19:14940560-14941079 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 472, 486 |
| Conread position: | 45-636 |
| Cow position: | chr19:43570240-43569653 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 145 |
| Conread position: | 45-638 |
| Cow position: | chr19:23597097-23597690 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 60 |
| Conread position: | 46-448 |
| Cow position: | chr19:14948398-14947996 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 127 |
| Conread position: | 46-482 |
| Cow position: | chr19:14959257-14958827 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 62 |
| Conread position: | 46-638 |
| Cow position: | chr19:23649707-23650299 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 47-506 |
| Cow position: | chr19:20635479-20635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 323 |
| Conread position: | 47-633 |
| Cow position: | chr19:20677685-20678271 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 71 |
| Conread position: | 48-521 |
| Cow position: | chr19:20678274-20678745 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 66 |
| Conread position: | 48-635 |
| Cow position: | chr19:43570395-43569818 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 125 |
| Conread position: | 49-599 |
| Cow position: | chr19:14940060-14940610 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 482, 477 |
| Conread position: | 49-599 |
| Cow position: | chr19:20635645-20635095 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 81 |
| Conread position: | 49-623 |
| Cow position: | chr19:20677939-20678513 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 91 |
| Conread position: | 49-638 |
| Cow position: | chr19:23614008-23614597 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 56 |
| Conread position: | 61-517 |
| Cow position: | chr19:14948467-14948011 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 7, 63 |
| Conread position: | 64-582 |
| Cow position: | chr19:14959804-14959300 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 329 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 197, 92 |
| Conread position: | 64-590 |
| Cow position: | chr19:20635546-20635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 217 |
| Conread position: | 64-624 |
| Cow position: | chr19:20678038-20678598 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 305 |
| Conread position: | 64-632 |
| Cow position: | chr19:20677534-20678102 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 64-638 |
| Cow position: | chr19:23613351-23613925 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 64-638 |
| Cow position: | chr19:23649305-23649879 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 299 |
| Conread position: | 64-638 |
| Cow position: | chr19:23649557-23650131 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 285 |
| Conread position: | 64-638 |
| Cow position: | chr19:23649641-23650215 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-562 |
| Cow position: | chr19:23597203-23597698 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 47 |
| Conread position: | 67-599 |
| Cow position: | chr19:20677453-20677985 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 132 |
| Conread position: | 73-607 |
| Cow position: | chr19:20678215-20678746 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 74-638 |
| Cow position: | chr19:43570452-43569899 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 43 |
| Conread position: | 88-608 |
| Cow position: | chr19:20677642-20678162 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 24 |
| Conread position: | 90-566 |
| Cow position: | chr19:14959297-14958827 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 90 |
| Conread position: | 94-638 |
| Cow position: | chr19:23597062-23597606 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 95 |
| Conread position: | 113-637 |
| Cow position: | chr19:23613316-23613840 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 113-638 |
| Cow position: | chr19:14960423-14959900 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 69 |
| Conread position: | 126-637 |
| Cow position: | chr19:23649283-23649794 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 313 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-638 |
| Cow position: | chr19:14960490-14959984 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 233 |
| Conread position: | 139-608 |
| Cow position: | chr19:20635639-20635170 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 139-608 |
| Cow position: | chr19:20677441-20677910 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 148-637 |
| Cow position: | chr19:14939991-14940480 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 136 |
| Conread position: | 174-638 |
| Cow position: | chr19:14939933-14940397 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 41 |
| Conread position: | 195-608 |
| Cow position: | chr19:20677332-20677742 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 185, 27 |
| Conread position: | 211-638 |
| Cow position: | chr19:14948484-14948058 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 216-608 |
| Cow position: | chr19:20635646-20635254 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 258 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 303, 320 |
| Conread position: | 384-624 |
| Cow position: | chr19:20635646-20635406 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.