Cow genome map

Conread name: ruio32_f18.y1

Conread position: 1-468
Cow position:
Alignm length: 471
Alignm identity: 291
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 210, 206

Conread position: 1-638
Cow position:
Alignm length: 640
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 348, 370

Conread position: 2-632
Cow position:
Alignm length: 632
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 543, 407

Conread position: 3-634
Cow position:
Alignm length: 637
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 103

Conread position: 7-433
Cow position:
Alignm length: 429
Alignm identity: 268
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 190, 18

Conread position: 7-453
Cow position:
Alignm length: 448
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 12

Conread position: 7-565
Cow position:
Alignm length: 565
Alignm identity: 350
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 115, 12

Conread position: 14-637
Cow position:
Alignm length: 630
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 18

Conread position: 22-348
Cow position:
Alignm length: 333
Alignm identity: 215
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 154, 10

Conread position: 32-638
Cow position:
Alignm length: 610
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 463

Conread position: 35-486
Cow position:
Alignm length: 452
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 35-517
Cow position:
Alignm length: 485
Alignm identity: 293
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 192, 24

Conread position: 35-560
Cow position:
Alignm length: 527
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 22

Conread position: 35-595
Cow position:
Alignm length: 564
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 72

Conread position: 35-637
Cow position:
Alignm length: 606
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 91

Conread position: 35-638
Cow position:
Alignm length: 605
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 93

Conread position: 37-515
Cow position:
Alignm length: 483
Alignm identity: 300
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 34

Conread position: 39-623
Cow position:
Alignm length: 589
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 151

Conread position: 39-638
Cow position:
Alignm length: 603
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 311, 327

Conread position: 39-638
Cow position:
Alignm length: 602
Alignm identity: 349
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 77

Conread position: 41-638
Cow position:
Alignm length: 607
Alignm identity: 354
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 165, 171

Conread position: 42-563
Cow position:
Alignm length: 525
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 67

Conread position: 43-599
Cow position:
Alignm length: 562
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 159

Conread position: 44-638
Cow position:
Alignm length: 599
Alignm identity: 356
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 69

Conread position: 45-632
Cow position:
Alignm length: 588
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 45-638
Cow position:
Alignm length: 595
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 69

Conread position: 45-638
Cow position:
Alignm length: 600
Alignm identity: 387
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 58, 69

Conread position: 46-320
Cow position:
Alignm length: 276
Alignm identity: 175
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 253, 258

Conread position: 46-354
Cow position:
Alignm length: 309
Alignm identity: 187
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 298, 0

Conread position: 46-605
Cow position:
Alignm length: 563
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 393, 403

Conread position: 46-605
Cow position:
Alignm length: 565
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 309, 13

Conread position: 46-632
Cow position:
Alignm length: 589
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 73

Conread position: 46-638
Cow position:
Alignm length: 597
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 62

Conread position: 47-493
Cow position:
Alignm length: 456
Alignm identity: 285
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 62, 162

Conread position: 49-263
Cow position:
Alignm length: 217
Alignm identity: 144
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 49, 64

Conread position: 49-515
Cow position:
Alignm length: 468
Alignm identity: 285
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 306, 317

Conread position: 49-520
Cow position:
Alignm length: 477
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 39

Conread position: 50-638
Cow position:
Alignm length: 591
Alignm identity: 345
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 245, 202

Conread position: 61-635
Cow position:
Alignm length: 579
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 307

Conread position: 64-318
Cow position:
Alignm length: 255
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 64-347
Cow position:
Alignm length: 284
Alignm identity: 179
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 64-418
Cow position:
Alignm length: 355
Alignm identity: 219
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 64-476
Cow position:
Alignm length: 414
Alignm identity: 258
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 283, 302

Conread position: 64-521
Cow position:
Alignm length: 464
Alignm identity: 289
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 57, 40

Conread position: 64-599
Cow position:
Alignm length: 538
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 186

Conread position: 64-605
Cow position:
Alignm length: 549
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 45

Conread position: 64-637
Cow position:
Alignm length: 576
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 474, 459

Conread position: 64-638
Cow position:
Alignm length: 579
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 54

Conread position: 64-638
Cow position:
Alignm length: 577
Alignm identity: 333
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 465, 303

Conread position: 65-563
Cow position:
Alignm length: 502
Alignm identity: 307
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 120, 113

Conread position: 66-632
Cow position:
Alignm length: 573
Alignm identity: 342
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 38, 43

Conread position: 67-605
Cow position:
Alignm length: 543
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 135

Conread position: 70-486
Cow position:
Alignm length: 420
Alignm identity: 259
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 133, 17

Conread position: 76-637
Cow position:
Alignm length: 570
Alignm identity: 352
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 196, 95

Conread position: 87-638
Cow position:
Alignm length: 554
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 19

Conread position: 88-476
Cow position:
Alignm length: 389
Alignm identity: 231
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 88-562
Cow position:
Alignm length: 475
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 88-638
Cow position:
Alignm length: 554
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 432

Conread position: 113-638
Cow position:
Alignm length: 534
Alignm identity: 325
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 143, 139

Conread position: 118-635
Cow position:
Alignm length: 519
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 246

Conread position: 123-392
Cow position:
Alignm length: 270
Alignm identity: 167
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 123-638
Cow position:
Alignm length: 517
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 24

Conread position: 138-637
Cow position:
Alignm length: 506
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 90

Conread position: 139-638
Cow position:
Alignm length: 502
Alignm identity: 311
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 117, 21

Conread position: 144-638
Cow position:
Alignm length: 497
Alignm identity: 308
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 106, 113

Conread position: 148-477
Cow position:
Alignm length: 330
Alignm identity: 203
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 158-638
Cow position:
Alignm length: 481
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 160-502
Cow position:
Alignm length: 345
Alignm identity: 216
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 213, 189

Conread position: 169-638
Cow position:
Alignm length: 473
Alignm identity: 287
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 186, 200

Conread position: 172-599
Cow position:
Alignm length: 432
Alignm identity: 257
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 198, 184

Conread position: 195-518
Cow position:
Alignm length: 328
Alignm identity: 218
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 78, 88

Conread position: 195-638
Cow position:
Alignm length: 447
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 36

Conread position: 196-427
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 61

Conread position: 221-636
Cow position:
Alignm length: 418
Alignm identity: 269
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 320, 304

Conread position: 229-638
Cow position:
Alignm length: 414
Alignm identity: 265
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 172, 165

Conread position: 233-574
Cow position:
Alignm length: 345
Alignm identity: 223
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 114, 130

Conread position: 254-638
Cow position:
Alignm length: 385
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 267-638
Cow position:
Alignm length: 376
Alignm identity: 239
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 31, 39

Conread position: 279-523
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 161, 149

Conread position: 280-596
Cow position:
Alignm length: 325
Alignm identity: 213
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 89

Conread position: 307-638
Cow position:
Alignm length: 337
Alignm identity: 218
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 62

Conread position: 316-638
Cow position:
Alignm length: 325
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 199, 226

Conread position: 361-626
Cow position:
Alignm length: 270
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 102

Conread position: 389-636
Cow position:
Alignm length: 248
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.