Cow genome map

Conread name: ruio32_f18.y1

Conread position: 1-353
Cow position:
Alignm length: 358
Alignm identity: 230
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 105, 58

Conread position: 1-405
Cow position:
Alignm length: 406
Alignm identity: 254
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 255, 251

Conread position: 1-562
Cow position:
Alignm length: 568
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 181

Conread position: 1-562
Cow position:
Alignm length: 566
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 32

Conread position: 1-588
Cow position:
Alignm length: 593
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 31

Conread position: 1-638
Cow position:
Alignm length: 642
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 280

Conread position: 1-638
Cow position:
Alignm length: 643
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 32

Conread position: 1-638
Cow position:
Alignm length: 640
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 514, 535

Conread position: 2-638
Cow position:
Alignm length: 642
Alignm identity: 391
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 7, 30

Conread position: 3-638
Cow position:
Alignm length: 638
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 278

Conread position: 30-518
Cow position:
Alignm length: 491
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 72

Conread position: 30-584
Cow position:
Alignm length: 559
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 80

Conread position: 37-324
Cow position:
Alignm length: 288
Alignm identity: 189
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 37-509
Cow position:
Alignm length: 473
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 37-638
Cow position:
Alignm length: 603
Alignm identity: 373
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 561, 107

Conread position: 39-322
Cow position:
Alignm length: 286
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 153, 139

Conread position: 41-599
Cow position:
Alignm length: 563
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 42-353
Cow position:
Alignm length: 312
Alignm identity: 192
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 206, 0

Conread position: 42-395
Cow position:
Alignm length: 355
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 64

Conread position: 42-560
Cow position:
Alignm length: 526
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 140

Conread position: 42-599
Cow position:
Alignm length: 562
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 66

Conread position: 43-599
Cow position:
Alignm length: 563
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 135

Conread position: 45-489
Cow position:
Alignm length: 445
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 45-521
Cow position:
Alignm length: 481
Alignm identity: 304
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 20, 14

Conread position: 49-638
Cow position:
Alignm length: 591
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 208

Conread position: 52-348
Cow position:
Alignm length: 301
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 60

Conread position: 61-638
Cow position:
Alignm length: 582
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 46

Conread position: 62-638
Cow position:
Alignm length: 581
Alignm identity: 352
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 65, 102

Conread position: 63-455
Cow position:
Alignm length: 396
Alignm identity: 240
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 50

Conread position: 64-515
Cow position:
Alignm length: 456
Alignm identity: 286
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 121, 114

Conread position: 64-638
Cow position:
Alignm length: 578
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 67

Conread position: 64-638
Cow position:
Alignm length: 582
Alignm identity: 364
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 61, 46

Conread position: 66-638
Cow position:
Alignm length: 574
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 463

Conread position: 67-637
Cow position:
Alignm length: 575
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 71-599
Cow position:
Alignm length: 535
Alignm identity: 316
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 203, 213

Conread position: 74-638
Cow position:
Alignm length: 568
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 277, 292

Conread position: 88-638
Cow position:
Alignm length: 554
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 107

Conread position: 127-623
Cow position:
Alignm length: 503
Alignm identity: 301
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 95, 73

Conread position: 132-599
Cow position:
Alignm length: 472
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 240

Conread position: 132-638
Cow position:
Alignm length: 510
Alignm identity: 300
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 356, 152

Conread position: 145-515
Cow position:
Alignm length: 373
Alignm identity: 239
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 219, 224

Conread position: 168-600
Cow position:
Alignm length: 439
Alignm identity: 274
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 260, 268

Conread position: 194-608
Cow position:
Alignm length: 425
Alignm identity: 284
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 90, 50

Conread position: 211-608
Cow position:
Alignm length: 398
Alignm identity: 240
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 215-638
Cow position:
Alignm length: 427
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 42

Conread position: 233-608
Cow position:
Alignm length: 378
Alignm identity: 227
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 138

Conread position: 295-632
Cow position:
Alignm length: 345
Alignm identity: 225
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 84, 36

Conread position: 315-638
Cow position:
Alignm length: 326
Alignm identity: 207
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 54

Conread position: 371-638
Cow position:
Alignm length: 270
Alignm identity: 186
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 144, 47

Conread position: 424-638
Cow position:
Alignm length: 216
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 190, 21

Show alignments to all cow chromosomes.