Cow genome map
| Conread name: | ruio32_f18.y1 |
| Conread position: | 1-236 |
| Cow position: | chr3:62743197-62743432 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 1-392 |
| Cow position: | chr3:68045958-68046349 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-562 |
| Cow position: | chr3:62722136-62721575 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 107 |
| Conread position: | 1-576 |
| Cow position: | chr3:62742467-62743033 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 174 |
| Conread position: | 1-633 |
| Cow position: | chr3:68027113-68027745 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 119 |
| Conread position: | 1-636 |
| Cow position: | chr3:62722220-62721585 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 366 |
| Conread position: | 6-637 |
| Cow position: | chr3:62742804-62743413 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 25 |
| Conread position: | 30-608 |
| Cow position: | chr3:68045567-68046145 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 338, 325 |
| Conread position: | 35-489 |
| Cow position: | chr3:62722018-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 155 |
| Conread position: | 35-563 |
| Cow position: | chr3:68045824-68046352 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 81 |
| Conread position: | 35-625 |
| Cow position: | chr3:62742417-62743003 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 107 |
| Conread position: | 35-631 |
| Cow position: | chr3:62742917-62743491 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 44-608 |
| Cow position: | chr3:68026989-68027552 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 45-501 |
| Cow position: | chr3:77351009-77350564 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 294 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 45-638 |
| Cow position: | chr3:77351175-77350593 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 54 |
| Conread position: | 49-638 |
| Cow position: | chr3:62722256-62721667 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-638 |
| Cow position: | chr3:68027077-68027666 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 148 |
| Conread position: | 49-638 |
| Cow position: | chr3:68045670-68046259 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 206 |
| Conread position: | 67-638 |
| Cow position: | chr3:62722322-62721751 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 126-638 |
| Cow position: | chr3:62742257-62742763 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 139-397 |
| Cow position: | chr3:16020465-16020214 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 150-638 |
| Cow position: | chr3:62722323-62721835 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 373 |
| Conread position: | 161-638 |
| Cow position: | chr3:68027021-68027498 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 42 |
| Conread position: | 161-638 |
| Cow position: | chr3:68045614-68046091 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 171-637 |
| Cow position: | chr3:68026947-68027413 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 54 |
| Conread position: | 189-632 |
| Cow position: | chr3:68045558-68046001 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 359, 337 |
| Conread position: | 221-523 |
| Cow position: | chr3:16020467-16020176 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 375-638 |
| Cow position: | chr3:62742254-62742516 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 153, 99 |
| Conread position: | 403-638 |
| Cow position: | chr3:68045604-68045839 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 40, 51 |
Show alignments to all cow chromosomes.