Cow genome map
| Conread name: | ruio32_f18.y1 |
| Conread position: | 1-246 |
| Cow position: | chr7:1015212-1015457 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-316 |
| Cow position: | chr7:11600746-11600430 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 105, 117 |
| Conread position: | 1-405 |
| Cow position: | chr7:3180474-3180877 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 262 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 210, 206 |
| Conread position: | 1-521 |
| Cow position: | chr7:18390267-18390787 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-523 |
| Cow position: | chr7:1439746-1440265 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 20 |
| Conread position: | 1-599 |
| Cow position: | chr7:8324838-8325436 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 112 |
| Conread position: | 1-625 |
| Cow position: | chr7:1014792-1015416 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 202 |
| Conread position: | 1-626 |
| Cow position: | chr7:3180054-3180679 (view UCSC Genome Browser custom track) |
| Alignm length: | 628 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 104 |
| Conread position: | 1-638 |
| Cow position: | chr7:3179970-3180607 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 112 |
| Conread position: | 2-608 |
| Cow position: | chr7:8242821-8243426 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 117 |
| Conread position: | 2-614 |
| Cow position: | chr7:8277618-8278231 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 118 |
| Conread position: | 5-636 |
| Cow position: | chr7:42879335-42878704 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 341, 361 |
| Conread position: | 30-489 |
| Cow position: | chr7:42878722-42878263 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 84 |
| Conread position: | 33-560 |
| Cow position: | chr7:1014077-1014601 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 336 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 32, 7 |
| Conread position: | 35-599 |
| Cow position: | chr7:42879053-42878489 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 330 |
| Conread position: | 35-608 |
| Cow position: | chr7:1014412-1014979 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 232 |
| Conread position: | 35-632 |
| Cow position: | chr7:11601132-11600535 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 79 |
| Conread position: | 35-638 |
| Cow position: | chr7:3180256-3180858 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 148 |
| Conread position: | 35-638 |
| Cow position: | chr7:11601048-11600445 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 505, 489 |
| Conread position: | 35-638 |
| Cow position: | chr7:18390049-18390652 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 82 |
| Conread position: | 41-600 |
| Cow position: | chr7:8325382-8325941 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 64 |
| Conread position: | 41-618 |
| Cow position: | chr7:8277405-8277980 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 42-312 |
| Cow position: | chr7:8325887-8326160 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 42-450 |
| Cow position: | chr7:1438311-1438719 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 113, 124 |
| Conread position: | 42-521 |
| Cow position: | chr7:8325635-8326114 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 62 |
| Conread position: | 42-583 |
| Cow position: | chr7:8277910-8278451 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 343 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 89, 63 |
| Conread position: | 42-596 |
| Cow position: | chr7:8324795-8325349 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 154 |
| Conread position: | 42-599 |
| Cow position: | chr7:3179927-3180484 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 481, 496 |
| Conread position: | 42-600 |
| Cow position: | chr7:8243448-8244005 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 168 |
| Conread position: | 42-600 |
| Cow position: | chr7:8243700-8244239 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 352 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 88 |
| Conread position: | 42-632 |
| Cow position: | chr7:1014335-1014919 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 477, 310 |
| Conread position: | 42-638 |
| Cow position: | chr7:1014587-1015177 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 64 |
| Conread position: | 42-638 |
| Cow position: | chr7:3179759-3180355 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 376 |
| Conread position: | 42-638 |
| Cow position: | chr7:42878878-42878282 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 325 |
| Conread position: | 42-638 |
| Cow position: | chr7:42879130-42878534 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 322 |
| Conread position: | 42-638 |
| Cow position: | chr7:42879214-42878618 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 325 |
| Conread position: | 45-521 |
| Cow position: | chr7:1015004-1015482 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 232 |
| Conread position: | 45-607 |
| Cow position: | chr7:18390227-18390790 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 64 |
| Conread position: | 45-638 |
| Cow position: | chr7:1014668-1015261 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 45-638 |
| Cow position: | chr7:1439535-1440128 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 68 |
| Conread position: | 46-638 |
| Cow position: | chr7:1014753-1015345 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 144 |
| Conread position: | 46-638 |
| Cow position: | chr7:3180183-3180775 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 550, 559 |
| Conread position: | 47-329 |
| Cow position: | chr7:11434504-11434222 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 59 |
| Conread position: | 47-479 |
| Cow position: | chr7:11434665-11434240 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 272 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 47-599 |
| Cow position: | chr7:8324968-8325520 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 362 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 47-608 |
| Cow position: | chr7:8242950-8243510 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 72 |
| Conread position: | 47-608 |
| Cow position: | chr7:8325304-8325865 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 49-484 |
| Cow position: | chr7:11600866-11600430 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 318 |
| Conread position: | 49-637 |
| Cow position: | chr7:18390147-18390735 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 49-638 |
| Cow position: | chr7:3179850-3180439 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 307 |
| Conread position: | 49-638 |
| Cow position: | chr7:11601202-11600613 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 149 |
| Conread position: | 59-624 |
| Cow position: | chr7:8277255-8277820 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 64-599 |
| Cow position: | chr7:8325573-8326108 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 124 |
| Conread position: | 64-608 |
| Cow position: | chr7:8243219-8243762 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 347 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 52, 61 |
| Conread position: | 64-608 |
| Cow position: | chr7:11434816-11434279 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 337 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 64-618 |
| Cow position: | chr7:8243386-8243940 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 350 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 42, 63 |
| Conread position: | 64-632 |
| Cow position: | chr7:1014273-1014835 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 302 |
| Conread position: | 69-608 |
| Cow position: | chr7:8242804-8243343 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 342 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 88-355 |
| Cow position: | chr7:1438441-1438708 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 103-638 |
| Cow position: | chr7:1439425-1439961 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 78 |
| Conread position: | 118-638 |
| Cow position: | chr7:3179751-3180271 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-523 |
| Cow position: | chr7:1438305-1438708 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 149, 163 |
| Conread position: | 126-593 |
| Cow position: | chr7:8277910-8278377 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 57 |
| Conread position: | 132-638 |
| Cow position: | chr7:1014257-1014757 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 388, 0 |
| Conread position: | 194-638 |
| Cow position: | chr7:3179659-3180103 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 206-638 |
| Cow position: | chr7:11601213-11600781 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 163 |
| Conread position: | 210-618 |
| Cow position: | chr7:1438311-1438719 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 41, 45 |
| Conread position: | 212-638 |
| Cow position: | chr7:42879296-42878870 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 144 |
| Conread position: | 233-638 |
| Cow position: | chr7:18389995-18390400 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 38 |
| Conread position: | 234-608 |
| Cow position: | chr7:8324735-8325109 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 83, 40 |
| Conread position: | 321-625 |
| Cow position: | chr7:8242804-8243108 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 58, 38 |
Show alignments to all cow chromosomes.