Cow genome map
| Conread name: | ruio32_f18.y1 |
| Conread position: | 1-477 |
| Cow position: | chr8:6958059-6957586 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 1-560 |
| Cow position: | chr8:45201627-45202176 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 347 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 249, 255 |
| Conread position: | 1-572 |
| Cow position: | chr8:48406853-48406280 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 181 |
| Conread position: | 1-607 |
| Cow position: | chr8:46816738-46817344 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 355 |
| Conread position: | 1-626 |
| Cow position: | chr8:55581095-55581720 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 511, 530 |
| Conread position: | 1-636 |
| Cow position: | chr8:48407105-48406470 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 392, 385 |
| Conread position: | 1-637 |
| Cow position: | chr8:46816234-46816870 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 103 |
| Conread position: | 1-637 |
| Cow position: | chr8:46816654-46817290 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 1-638 |
| Cow position: | chr8:45200787-45201424 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 143 |
| Conread position: | 1-638 |
| Cow position: | chr8:46816402-46817039 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 537, 522 |
| Conread position: | 1-638 |
| Cow position: | chr8:48407525-48406888 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 350, 370 |
| Conread position: | 2-600 |
| Cow position: | chr8:55580844-55581443 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 595, 0 |
| Conread position: | 28-590 |
| Cow position: | chr8:48407332-48406768 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 35-476 |
| Cow position: | chr8:55581297-55581738 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-606 |
| Cow position: | chr8:46816184-46816754 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 331 |
| Conread position: | 35-638 |
| Cow position: | chr8:48406987-48406384 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 35-638 |
| Cow position: | chr8:48407407-48406804 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 37-635 |
| Cow position: | chr8:55580963-55581561 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 215 |
| Conread position: | 39-313 |
| Cow position: | chr8:46817112-46817386 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 39-638 |
| Cow position: | chr8:48407571-48406972 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 69 |
| Conread position: | 42-599 |
| Cow position: | chr8:45201416-45201973 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 497, 481 |
| Conread position: | 42-599 |
| Cow position: | chr8:46815936-46816496 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 91 |
| Conread position: | 42-637 |
| Cow position: | chr8:55581052-55581647 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 499, 481 |
| Conread position: | 42-638 |
| Cow position: | chr8:45201080-45201676 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 219 |
| Conread position: | 42-638 |
| Cow position: | chr8:45201164-45201760 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 63 |
| Conread position: | 42-638 |
| Cow position: | chr8:45201248-45201844 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 64 |
| Conread position: | 42-638 |
| Cow position: | chr8:46816527-46817123 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-638 |
| Cow position: | chr8:48407232-48406636 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 327 |
| Conread position: | 45-638 |
| Cow position: | chr8:46816110-46816703 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 493, 479 |
| Conread position: | 46-636 |
| Cow position: | chr8:46816363-46816953 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 63 |
| Conread position: | 47-638 |
| Cow position: | chr8:46816028-46816619 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 491, 476 |
| Conread position: | 72-635 |
| Cow position: | chr8:46815882-46816448 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 297 |
| Conread position: | 88-560 |
| Cow position: | chr8:6958056-6957587 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 101 |
| Conread position: | 88-638 |
| Cow position: | chr8:55580846-55581396 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 113-638 |
| Cow position: | chr8:46815680-46816199 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 318 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 236, 105 |
| Conread position: | 139-637 |
| Cow position: | chr8:46815865-46816366 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 320 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 100, 146 |
| Conread position: | 145-638 |
| Cow position: | chr8:48407633-48407140 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 378 |
| Conread position: | 160-638 |
| Cow position: | chr8:55580834-55581312 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 169-638 |
| Cow position: | chr8:6958059-6957593 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 270 |
| Conread position: | 215-638 |
| Cow position: | chr8:48407647-48407224 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 306 |
| Conread position: | 215-638 |
| Cow position: | chr8:55580805-55581228 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 280 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 20, 30 |
| Conread position: | 249-600 |
| Cow position: | chr8:6958063-6957713 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 271, 0 |
| Conread position: | 316-638 |
| Cow position: | chr8:55580737-55581060 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 8, 97 |
Show alignments to all cow chromosomes.