Cow genome map

Conread name: ruio32_f18.y1

Conread position: 1-334
Cow position: chrX:29044987-29044654 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 1-494
Cow position: chrX:25324726-25324233 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 32

Conread position: 1-574
Cow position: chrX:25324810-25324237 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 370

Conread position: 1-599
Cow position: chrX:25324978-25324380 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 32

Conread position: 1-599
Cow position: chrX:25325062-25324464 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 354

Conread position: 1-638
Cow position: chrX:25309827-25310464 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 206

Conread position: 1-638
Cow position: chrX:25309911-25310548 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 348

Conread position: 2-637
Cow position: chrX:25325565-25324930 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 110

Conread position: 35-415
Cow position: chrX:29045037-29044657 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 320

Conread position: 35-509
Cow position: chrX:25310113-25310586 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 167

Conread position: 35-624
Cow position: chrX:25309777-25310366 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 503, 492

Conread position: 41-605
Cow position: chrX:25325190-25324626 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 240

Conread position: 41-608
Cow position: chrX:12627332-12627897 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 350
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 57, 78

Conread position: 42-637
Cow position: chrX:25324853-25324258 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 481, 494

Conread position: 42-637
Cow position: chrX:25325609-25325014 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 67

Conread position: 42-637
Cow position: chrX:29045282-29044687 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 42-638
Cow position: chrX:25325357-25324761 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 219

Conread position: 45-415
Cow position: chrX:25324598-25324230 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 69, 64

Conread position: 45-584
Cow position: chrX:25310039-25310578 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 241

Conread position: 45-586
Cow position: chrX:29045195-29044654 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 311

Conread position: 45-605
Cow position: chrX:25325774-25325214 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 503, 478

Conread position: 45-608
Cow position: chrX:29045762-29045220 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 359
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 143, 131

Conread position: 45-637
Cow position: chrX:25325102-25324510 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 473, 491

Conread position: 45-638
Cow position: chrX:25325270-25324677 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 324

Conread position: 45-638
Cow position: chrX:29045360-29044770 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 28

Conread position: 47-638
Cow position: chrX:25309705-25310296 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 143

Conread position: 49-637
Cow position: chrX:25325434-25324846 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 306

Conread position: 49-638
Cow position: chrX:25325856-25325265 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 57

Conread position: 62-600
Cow position: chrX:13826782-13826244 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 331
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 45, 57

Conread position: 66-468
Cow position: chrX:14181304-14180902 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 239
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 48

Conread position: 88-634
Cow position: chrX:13826924-13826378 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 319
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 115

Conread position: 118-511
Cow position: chrX:29045773-29045380 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 256
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 255, 238

Conread position: 172-512
Cow position: chrX:14181282-14180942 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 214
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 121, 111

Conread position: 202-601
Cow position: chrX:29045773-29045374 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 154

Conread position: 207-632
Cow position: chrX:25309697-25310122 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 329

Conread position: 286-632
Cow position: chrX:29045773-29045427 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 80, 63

Conread position: 287-606
Cow position: chrX:25309693-25310012 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 226
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 34, 41

Conread position: 390-638
Cow position: chrX:29045837-29045589 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 157, 138

Show alignments to all cow chromosomes.