Cow genome map
| Conread name: | uFN-UNL-P-FN-br-e-07-0-UNL.s1 |
| Conread position: | 53-452 |
| Cow position: | chr18:42744980-42744590 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 53-453 |
| Cow position: | chr18:43120916-43120522 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 247, 56 |
| Conread position: | 53-455 |
| Cow position: | chr18:43053731-43053329 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 54 |
| Conread position: | 53-458 |
| Cow position: | chr18:42985829-42985427 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 45 |
| Conread position: | 58-451 |
| Cow position: | chr18:42960798-42960419 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 59-456 |
| Cow position: | chr18:44239494-44239888 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 48 |
| Conread position: | 70-439 |
| Cow position: | chr18:43176088-43175731 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 245 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 126, 27 |
| Conread position: | 72-460 |
| Cow position: | chr18:43023309-43022935 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 258 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 184-452 |
| Cow position: | chr18:41949492-41949221 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 230-452 |
| Cow position: | chr18:42838031-42837809 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 261-452 |
| Cow position: | chr18:44154263-44154072 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 262-451 |
| Cow position: | chr18:43175251-43175062 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 265-451 |
| Cow position: | chr18:42985536-42985350 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 265-452 |
| Cow position: | chr18:44184694-44184507 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 265-453 |
| Cow position: | chr18:42985452-42985264 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 119, 104 |
| Conread position: | 265-454 |
| Cow position: | chr18:43022291-43022102 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 265-458 |
| Cow position: | chr18:43022375-43022182 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-452 |
| Cow position: | chr18:42985188-42985013 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-458 |
| Cow position: | chr18:43175320-43175139 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-458 |
| Cow position: | chr18:44253771-44253590 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 277-460 |
| Cow position: | chr18:44240129-44240312 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-449 |
| Cow position: | chr18:42985271-42985100 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-451 |
| Cow position: | chr18:42837899-42837726 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 278-452 |
| Cow position: | chr18:44184429-44184255 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 12, 24 |
| Conread position: | 278-452 |
| Cow position: | chr18:44184849-44184675 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 105, 97 |
| Conread position: | 278-455 |
| Cow position: | chr18:44184513-44184336 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 114, 107 |
| Conread position: | 278-457 |
| Cow position: | chr18:41948891-41948712 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-451 |
| Cow position: | chr18:42959597-42959426 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 11, 22 |
| Conread position: | 280-452 |
| Cow position: | chr18:43119696-43119524 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 287-452 |
| Cow position: | chr18:44184924-44184759 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-452 |
| Cow position: | chr18:41948786-41948633 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-454 |
| Cow position: | chr18:42984746-42984591 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-455 |
| Cow position: | chr18:42984662-42984506 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-455 |
| Cow position: | chr18:43022173-43022017 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-457 |
| Cow position: | chr18:44240655-44240813 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-450 |
| Cow position: | chr18:42960152-42960006 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-455 |
| Cow position: | chr18:43119754-43119605 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-456 |
| Cow position: | chr18:41197724-41197874 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-450 |
| Cow position: | chr18:44240075-44240218 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-454 |
| Cow position: | chr18:43022417-43022270 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-457 |
| Cow position: | chr18:42984906-42984756 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-455 |
| Cow position: | chr18:44184558-44184420 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 328-452 |
| Cow position: | chr18:43175017-43174893 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-451 |
| Cow position: | chr18:41948907-41948802 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.