Cow genome map
| Conread name: | uFN-UNL-P-FN-cm-g-03-0-UNL.s1 |
| Conread position: | 417-584 |
| Cow position: | chr11:41278406-41278234 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 422-578 |
| Cow position: | chr11:43641599-43641441 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 423-585 |
| Cow position: | chr11:12555091-12555258 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 35 |
| Conread position: | 429-570 |
| Cow position: | chr11:15772505-15772651 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 79, 134 |
| Conread position: | 429-572 |
| Cow position: | chr11:49568028-49568171 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 432-575 |
| Cow position: | chr11:21843930-21844081 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 433-582 |
| Cow position: | chr11:85262720-85262567 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 435-578 |
| Cow position: | chr11:66041475-66041333 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 437-578 |
| Cow position: | chr11:58186071-58185937 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 439-578 |
| Cow position: | chr11:30708702-30708556 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 69, 19 |
| Conread position: | 440-570 |
| Cow position: | chr11:69417600-69417464 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 440-578 |
| Cow position: | chr11:1485037-1485172 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 68, 86 |
| Conread position: | 442-570 |
| Cow position: | chr11:64781283-64781149 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 442-585 |
| Cow position: | chr11:26057452-26057602 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 66, 136 |
| Conread position: | 443-663 |
| Cow position: | chr11:6154762-6154544 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 135 |
| Conread position: | 444-570 |
| Cow position: | chr11:17889533-17889666 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 444-578 |
| Cow position: | chr11:2830849-2830711 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 446-578 |
| Cow position: | chr11:32586937-32587069 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 446-578 |
| Cow position: | chr11:70756666-70756532 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 447-578 |
| Cow position: | chr11:66188130-66188262 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 448-568 |
| Cow position: | chr11:70273650-70273525 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 448-570 |
| Cow position: | chr11:25620201-25620328 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-572 |
| Cow position: | chr11:31525468-31525591 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 448-573 |
| Cow position: | chr11:13940376-13940246 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 128 |
| Conread position: | 448-575 |
| Cow position: | chr11:16315063-16314930 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 118 |
| Conread position: | 448-575 |
| Cow position: | chr11:25968664-25968797 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-575 |
| Cow position: | chr11:32800816-32800683 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-575 |
| Cow position: | chr11:49153129-49153006 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-575 |
| Cow position: | chr11:62811485-62811354 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-578 |
| Cow position: | chr11:15366788-15366918 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 77 |
| Conread position: | 448-578 |
| Cow position: | chr11:19147953-19148082 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 448-578 |
| Cow position: | chr11:35732894-35733029 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-578 |
| Cow position: | chr11:39462808-39462678 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 448-578 |
| Cow position: | chr11:47784968-47784829 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 448-578 |
| Cow position: | chr11:57767379-57767244 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 448-578 |
| Cow position: | chr11:62102257-62102393 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-578 |
| Cow position: | chr11:62620565-62620431 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-578 |
| Cow position: | chr11:63849761-63849897 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 448-578 |
| Cow position: | chr11:63977244-63977112 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-578 |
| Cow position: | chr11:65495155-65495285 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 448-578 |
| Cow position: | chr11:75388186-75388318 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 8, 74 |
| Conread position: | 448-578 |
| Cow position: | chr11:77241890-77241759 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 61, 10 |
| Conread position: | 448-580 |
| Cow position: | chr11:3715011-3714873 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 448-585 |
| Cow position: | chr11:28078678-28078541 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 448-585 |
| Cow position: | chr11:68592208-68592065 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-587 |
| Cow position: | chr11:65939673-65939817 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 61, 47 |
| Conread position: | 449-578 |
| Cow position: | chr11:49396337-49396471 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 449-578 |
| Cow position: | chr11:81175786-81175652 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 450-578 |
| Cow position: | chr11:27248674-27248545 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 450-578 |
| Cow position: | chr11:57873995-57873863 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 451-570 |
| Cow position: | chr11:37565055-37564936 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 71 |
| Conread position: | 452-568 |
| Cow position: | chr11:36286889-36286776 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 452-578 |
| Cow position: | chr11:2937487-2937609 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 452-578 |
| Cow position: | chr11:36092734-36092861 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 452-578 |
| Cow position: | chr11:82732965-82733095 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 453-553 |
| Cow position: | chr11:41295039-41295144 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 91 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 453-578 |
| Cow position: | chr11:26535968-26535840 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 453-578 |
| Cow position: | chr11:41985864-41985991 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 453-578 |
| Cow position: | chr11:62742464-62742591 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 453-578 |
| Cow position: | chr11:63498947-63499075 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 454-570 |
| Cow position: | chr11:24551574-24551451 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 454-570 |
| Cow position: | chr11:33271612-33271493 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 454-574 |
| Cow position: | chr11:1842140-1842022 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 68 |
| Conread position: | 454-574 |
| Cow position: | chr11:6784388-6784267 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 109 |
| Conread position: | 454-574 |
| Cow position: | chr11:30986819-30986697 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 454-578 |
| Cow position: | chr11:3896515-3896646 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 454-578 |
| Cow position: | chr11:17369709-17369585 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 454-578 |
| Cow position: | chr11:48296208-48296085 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 56, 43 |
| Conread position: | 457-570 |
| Cow position: | chr11:62889712-62889831 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 457-578 |
| Cow position: | chr11:33369332-33369205 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 458-575 |
| Cow position: | chr11:30638773-30638892 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 458-578 |
| Cow position: | chr11:63485111-63484992 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 458-578 |
| Cow position: | chr11:66104214-66104334 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 463-578 |
| Cow position: | chr11:2310241-2310130 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 465-574 |
| Cow position: | chr11:13042976-13043087 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 468-575 |
| Cow position: | chr11:63435691-63435578 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.