Cow genome map

Conread name: uFN-UNL-P-FN-cm-g-03-0-UNL.s1

Conread position: 431-574
Cow position: chr18:38669634-38669785 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 7, 28

Conread position: 432-578
Cow position: chr18:16313564-16313418 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 91

Conread position: 434-570
Cow position: chr18:3212066-3211925 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 436-574
Cow position: chr18:1399169-1399312 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 16

Conread position: 439-575
Cow position: chr18:24022796-24022660 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 21

Conread position: 439-578
Cow position: chr18:47824594-47824734 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 13

Conread position: 440-548
Cow position: chr18:20226303-20226191 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 440-578
Cow position: chr18:50004526-50004666 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 440-633
Cow position: chr18:18520624-18520810 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 11

Conread position: 443-578
Cow position: chr18:46048932-46048791 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 445-578
Cow position: chr18:5072242-5072371 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 62, 81

Conread position: 447-570
Cow position: chr18:51757268-51757140 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 448-567
Cow position: chr18:44909224-44909103 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 448-568
Cow position: chr18:30295437-30295557 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 73

Conread position: 448-570
Cow position: chr18:12584672-12584792 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 448-570
Cow position: chr18:17195174-17195298 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 448-570
Cow position: chr18:49602870-49602996 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 448-570
Cow position: chr18:52251682-52251810 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 110
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 448-575
Cow position: chr18:24719481-24719355 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 84

Conread position: 448-575
Cow position: chr18:55692990-55692858 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 448-578
Cow position: chr18:5632437-5632307 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 75

Conread position: 448-578
Cow position: chr18:7487407-7487271 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 448-578
Cow position: chr18:8208252-8208386 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 10

Conread position: 448-578
Cow position: chr18:9974158-9974289 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 104

Conread position: 448-578
Cow position: chr18:22180609-22180738 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 74

Conread position: 448-578
Cow position: chr18:23649098-23648961 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 448-578
Cow position: chr18:26647731-26647598 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 10

Conread position: 448-578
Cow position: chr18:34444565-34444697 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 448-578
Cow position: chr18:36500909-36501039 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 80

Conread position: 448-578
Cow position: chr18:49280891-49281024 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 26

Conread position: 448-580
Cow position: chr18:45573553-45573417 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 448-581
Cow position: chr18:10214019-10214154 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 112

Conread position: 448-585
Cow position: chr18:51643197-51643333 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 74

Conread position: 449-570
Cow position: chr18:34490452-34490328 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 449-570
Cow position: chr18:38211330-38211203 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 449-575
Cow position: chr18:19809512-19809640 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 449-578
Cow position: chr18:3180581-3180450 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 449-578
Cow position: chr18:4851314-4851444 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 37

Conread position: 449-578
Cow position: chr18:11867509-11867379 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 59, 91

Conread position: 449-578
Cow position: chr18:12059165-12059036 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 87

Conread position: 449-578
Cow position: chr18:17756770-17756906 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 450-575
Cow position: chr18:5647978-5647855 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 76

Conread position: 450-575
Cow position: chr18:18918793-18918918 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 58, 69

Conread position: 451-570
Cow position: chr18:33364379-33364259 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 72

Conread position: 451-572
Cow position: chr18:32960248-32960122 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 451-575
Cow position: chr18:56181288-56181414 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 89

Conread position: 452-578
Cow position: chr18:641147-641274 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 56, 109

Conread position: 453-570
Cow position: chr18:37690318-37690197 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 453-570
Cow position: chr18:52387051-52387173 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 453-573
Cow position: chr18:2108415-2108291 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 59

Conread position: 453-574
Cow position: chr18:41703001-41702877 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 453-578
Cow position: chr18:4530722-4530598 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 81, 49

Conread position: 453-578
Cow position: chr18:10117903-10117779 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 81

Conread position: 453-578
Cow position: chr18:50359492-50359371 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 73

Conread position: 453-585
Cow position: chr18:43283589-43283724 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 118

Conread position: 454-578
Cow position: chr18:3709397-3709269 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 109

Conread position: 454-578
Cow position: chr18:5189525-5189654 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 454-578
Cow position: chr18:18844177-18844055 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 454-578
Cow position: chr18:22045245-22045375 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 454-578
Cow position: chr18:31159106-31159234 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 42

Conread position: 454-584
Cow position: chr18:33757180-33757050 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 69

Conread position: 455-578
Cow position: chr18:697054-697183 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 53, 109

Conread position: 456-578
Cow position: chr18:31556993-31557121 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 108

Conread position: 458-578
Cow position: chr18:10757895-10758016 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 68

Conread position: 458-578
Cow position: chr18:35857762-35857885 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 465-578
Cow position: chr18:43014715-43014828 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 43, 73

Show alignments to all cow chromosomes.