Cow genome map
| Conread name: | uFN-UNL-P-FN-cm-g-03-0-UNL.s1 |
| Conread position: | 420-571 |
| Cow position: | chr19:7558769-7558611 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 422-578 |
| Cow position: | chr19:25041025-25041186 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 54 |
| Conread position: | 426-578 |
| Cow position: | chr19:5521941-5522094 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 97 |
| Conread position: | 428-578 |
| Cow position: | chr19:3811808-3811958 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 434-568 |
| Cow position: | chr19:15969883-15969742 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 435-575 |
| Cow position: | chr19:52356458-52356316 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 437-578 |
| Cow position: | chr19:11211068-11211217 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 439-555 |
| Cow position: | chr19:13267004-13267119 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 439-570 |
| Cow position: | chr19:12497210-12497072 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 439-571 |
| Cow position: | chr19:35870991-35870855 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 439-578 |
| Cow position: | chr19:2220867-2221014 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 439-578 |
| Cow position: | chr19:39378095-39378230 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 440-578 |
| Cow position: | chr19:30384895-30385032 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 69, 84 |
| Conread position: | 442-575 |
| Cow position: | chr19:49221423-49221557 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 10 |
| Conread position: | 442-578 |
| Cow position: | chr19:19174717-19174579 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 18, 46 |
| Conread position: | 443-574 |
| Cow position: | chr19:15853123-15852992 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 14 |
| Conread position: | 444-578 |
| Cow position: | chr19:41347567-41347436 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 447-578 |
| Cow position: | chr19:16686787-16686923 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 447-578 |
| Cow position: | chr19:41946916-41946781 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 447-578 |
| Cow position: | chr19:46822904-46822770 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 127 |
| Conread position: | 448-570 |
| Cow position: | chr19:12760906-12761034 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-570 |
| Cow position: | chr19:13439668-13439540 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 448-570 |
| Cow position: | chr19:38411063-38410937 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 41 |
| Conread position: | 448-574 |
| Cow position: | chr19:28810122-28810251 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 448-574 |
| Cow position: | chr19:38732332-38732204 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 448-575 |
| Cow position: | chr19:4328679-4328811 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 448-575 |
| Cow position: | chr19:11194569-11194698 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 76 |
| Conread position: | 448-575 |
| Cow position: | chr19:24068087-24068220 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-575 |
| Cow position: | chr19:39795383-39795254 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 448-575 |
| Cow position: | chr19:40126971-40127102 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-575 |
| Cow position: | chr19:48729037-48729169 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 448-578 |
| Cow position: | chr19:729554-729686 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 61, 37 |
| Conread position: | 448-578 |
| Cow position: | chr19:2137634-2137764 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 448-578 |
| Cow position: | chr19:2589709-2589576 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 40 |
| Conread position: | 448-578 |
| Cow position: | chr19:3621623-3621491 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 448-578 |
| Cow position: | chr19:8185399-8185264 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-578 |
| Cow position: | chr19:10172524-10172398 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 76 |
| Conread position: | 448-578 |
| Cow position: | chr19:11816529-11816662 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 70 |
| Conread position: | 448-578 |
| Cow position: | chr19:13121092-13121222 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 448-578 |
| Cow position: | chr19:14581553-14581423 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 448-578 |
| Cow position: | chr19:23304295-23304429 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 448-578 |
| Cow position: | chr19:37466867-37467000 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-578 |
| Cow position: | chr19:43292527-43292394 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 112 |
| Conread position: | 448-578 |
| Cow position: | chr19:43413974-43413844 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 87 |
| Conread position: | 448-578 |
| Cow position: | chr19:49683670-49683804 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 448-580 |
| Cow position: | chr19:12714296-12714159 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-585 |
| Cow position: | chr19:7594962-7595098 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 448-585 |
| Cow position: | chr19:34166562-34166421 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 48 |
| Conread position: | 448-585 |
| Cow position: | chr19:54105650-54105507 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 449-580 |
| Cow position: | chr19:41188029-41187898 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 450-570 |
| Cow position: | chr19:25582494-25582374 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 73 |
| Conread position: | 451-575 |
| Cow position: | chr19:5912766-5912896 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 452-573 |
| Cow position: | chr19:31268803-31268688 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 452-573 |
| Cow position: | chr19:31269025-31268910 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 452-574 |
| Cow position: | chr19:22414077-22414201 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 452-578 |
| Cow position: | chr19:4485958-4486089 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 452-578 |
| Cow position: | chr19:10238926-10238798 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 452-578 |
| Cow position: | chr19:11191431-11191559 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 452-578 |
| Cow position: | chr19:15887126-15887259 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 452-578 |
| Cow position: | chr19:30471167-30471293 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 87, 57 |
| Conread position: | 452-578 |
| Cow position: | chr19:49959060-49958931 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 453-570 |
| Cow position: | chr19:38637595-38637718 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 453-578 |
| Cow position: | chr19:4602507-4602633 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 453-578 |
| Cow position: | chr19:49290269-49290396 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 454-568 |
| Cow position: | chr19:35246133-35246013 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 454-570 |
| Cow position: | chr19:10755489-10755371 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 454-574 |
| Cow position: | chr19:27968506-27968631 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 454-575 |
| Cow position: | chr19:33610078-33609953 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 454-578 |
| Cow position: | chr19:17355047-17354919 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 54, 102 |
| Conread position: | 454-578 |
| Cow position: | chr19:29139393-29139263 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 454-578 |
| Cow position: | chr19:41388948-41388823 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 54, 98 |
| Conread position: | 454-578 |
| Cow position: | chr19:47727234-47727362 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 455-578 |
| Cow position: | chr19:30227709-30227581 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 458-578 |
| Cow position: | chr19:35623577-35623448 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 460-572 |
| Cow position: | chr19:26975889-26976000 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 62 |
| Conread position: | 463-578 |
| Cow position: | chr19:24220327-24220446 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.