Cow genome map
| Conread name: | uFN-UNL-P-FN-cm-g-03-0-UNL.s1 |
| Conread position: | 415-578 |
| Cow position: | chr24:44987156-44987327 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 27, 9 |
| Conread position: | 423-575 |
| Cow position: | chr24:43371446-43371295 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 433-578 |
| Cow position: | chr24:43445815-43445966 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 435-575 |
| Cow position: | chr24:19763336-19763480 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 440-578 |
| Cow position: | chr24:16510163-16510025 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 443-578 |
| Cow position: | chr24:36554515-36554650 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 79 |
| Conread position: | 443-584 |
| Cow position: | chr24:13586805-13586949 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 65, 106 |
| Conread position: | 446-578 |
| Cow position: | chr24:30483761-30483893 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 76 |
| Conread position: | 448-566 |
| Cow position: | chr24:27040231-27040107 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 116 |
| Conread position: | 448-568 |
| Cow position: | chr24:7917198-7917324 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-570 |
| Cow position: | chr24:38693696-38693823 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 45 |
| Conread position: | 448-571 |
| Cow position: | chr24:21606495-21606624 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-574 |
| Cow position: | chr24:38006531-38006666 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-575 |
| Cow position: | chr24:11035331-11035459 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 75 |
| Conread position: | 448-575 |
| Cow position: | chr24:12121080-12120947 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-575 |
| Cow position: | chr24:15861409-15861543 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 448-577 |
| Cow position: | chr24:5152707-5152573 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 128 |
| Conread position: | 448-578 |
| Cow position: | chr24:230461-230331 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 64 |
| Conread position: | 448-578 |
| Cow position: | chr24:250354-250490 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 116 |
| Conread position: | 448-578 |
| Cow position: | chr24:14550971-14550842 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 110, 87 |
| Conread position: | 448-578 |
| Cow position: | chr24:18750891-18750755 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-578 |
| Cow position: | chr24:18811013-18810879 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 448-578 |
| Cow position: | chr24:19187113-19186985 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 448-578 |
| Cow position: | chr24:22420143-22420008 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 448-578 |
| Cow position: | chr24:25970903-25971028 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 448-578 |
| Cow position: | chr24:27906619-27906487 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 71, 58 |
| Conread position: | 448-578 |
| Cow position: | chr24:39910850-39910985 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 122 |
| Conread position: | 448-583 |
| Cow position: | chr24:17308960-17309095 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 448-583 |
| Cow position: | chr24:35210239-35210097 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 448-584 |
| Cow position: | chr24:31383289-31383157 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 449-568 |
| Cow position: | chr24:18405099-18405223 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 114 |
| Conread position: | 449-570 |
| Cow position: | chr24:18702580-18702454 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 107 |
| Conread position: | 449-570 |
| Cow position: | chr24:19801019-19800898 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 449-575 |
| Cow position: | chr24:22567286-22567154 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 449-575 |
| Cow position: | chr24:31160862-31160987 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 86 |
| Conread position: | 449-578 |
| Cow position: | chr24:3193091-3193225 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 449-578 |
| Cow position: | chr24:33098292-33098425 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 449-578 |
| Cow position: | chr24:34301857-34301991 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 449-579 |
| Cow position: | chr24:25947679-25947814 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 59, 128 |
| Conread position: | 450-578 |
| Cow position: | chr24:26588397-26588268 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 87 |
| Conread position: | 450-578 |
| Cow position: | chr24:27810328-27810205 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 450-580 |
| Cow position: | chr24:36286747-36286615 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 451-567 |
| Cow position: | chr24:27149560-27149442 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 69, 37 |
| Conread position: | 451-578 |
| Cow position: | chr24:37252335-37252205 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 451-581 |
| Cow position: | chr24:28722055-28721929 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 452-575 |
| Cow position: | chr24:27719353-27719476 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 452-578 |
| Cow position: | chr24:2992703-2992833 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 114 |
| Conread position: | 452-578 |
| Cow position: | chr24:3494058-3493932 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 452-578 |
| Cow position: | chr24:32890868-32890996 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 76 |
| Conread position: | 453-559 |
| Cow position: | chr24:10031750-10031640 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 453-573 |
| Cow position: | chr24:34896525-34896648 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 453-578 |
| Cow position: | chr24:37823700-37823575 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 55, 93 |
| Conread position: | 454-578 |
| Cow position: | chr24:27553275-27553142 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 454-579 |
| Cow position: | chr24:39523275-39523402 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 455-573 |
| Cow position: | chr24:41565926-41566049 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 456-567 |
| Cow position: | chr24:28566166-28566275 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 66 |
| Conread position: | 456-577 |
| Cow position: | chr24:33944579-33944450 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 457-578 |
| Cow position: | chr24:4634993-4635120 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 458-578 |
| Cow position: | chr24:44896212-44896086 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.