Cow genome map
| Conread name: | uFN-UNL-P-FN-cm-g-03-0-UNL.s1 |
| Conread position: | 406-570 |
| Cow position: | chr25:26087765-26087599 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 422-568 |
| Cow position: | chr25:17725265-17725113 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 423-576 |
| Cow position: | chr25:18201702-18201857 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 86, 23 |
| Conread position: | 431-548 |
| Cow position: | chr25:32666473-32666352 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 431-575 |
| Cow position: | chr25:33663689-33663832 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 77, 93 |
| Conread position: | 433-572 |
| Cow position: | chr25:24115098-24115240 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 434-578 |
| Cow position: | chr25:9494928-9494775 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 440-565 |
| Cow position: | chr25:16491309-16491181 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 440-578 |
| Cow position: | chr25:13272782-13272639 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 440-578 |
| Cow position: | chr25:28939928-28940071 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 442-592 |
| Cow position: | chr25:6940283-6940433 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 443-578 |
| Cow position: | chr25:18288562-18288699 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 443-578 |
| Cow position: | chr25:33555816-33555675 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 444-578 |
| Cow position: | chr25:37648989-37648851 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 446-575 |
| Cow position: | chr25:21893541-21893411 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 91 |
| Conread position: | 446-578 |
| Cow position: | chr25:8410828-8410964 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 62, 116 |
| Conread position: | 446-578 |
| Cow position: | chr25:26989405-26989267 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 15 |
| Conread position: | 447-585 |
| Cow position: | chr25:20019773-20019908 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 88 |
| Conread position: | 448-552 |
| Cow position: | chr25:20018349-20018239 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 26, 31 |
| Conread position: | 448-570 |
| Cow position: | chr25:7311191-7311318 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 448-570 |
| Cow position: | chr25:33100775-33100653 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 448-575 |
| Cow position: | chr25:1838446-1838314 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 448-575 |
| Cow position: | chr25:5922511-5922634 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 448-575 |
| Cow position: | chr25:18720924-18721047 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 448-578 |
| Cow position: | chr25:20008339-20008203 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 448-578 |
| Cow position: | chr25:21082203-21082337 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-578 |
| Cow position: | chr25:22642476-22642334 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 448-578 |
| Cow position: | chr25:36370024-36369888 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-578 |
| Cow position: | chr25:36375715-36375579 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-578 |
| Cow position: | chr25:36872852-36872986 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-585 |
| Cow position: | chr25:11957008-11956867 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 449-574 |
| Cow position: | chr25:9573933-9574060 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 449-578 |
| Cow position: | chr25:16921591-16921727 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 449-578 |
| Cow position: | chr25:22731027-22730898 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 29 |
| Conread position: | 449-585 |
| Cow position: | chr25:20523036-20523171 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 39 |
| Conread position: | 450-578 |
| Cow position: | chr25:22315406-22315275 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 451-567 |
| Cow position: | chr25:28856638-28856519 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 452-578 |
| Cow position: | chr25:14791953-14791824 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 452-578 |
| Cow position: | chr25:15349710-15349838 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 452-578 |
| Cow position: | chr25:15999351-15999482 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 55, 104 |
| Conread position: | 452-578 |
| Cow position: | chr25:24669253-24669379 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 453-570 |
| Cow position: | chr25:1763282-1763165 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 453-574 |
| Cow position: | chr25:7306488-7306366 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 99 |
| Conread position: | 453-575 |
| Cow position: | chr25:2662592-2662468 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 453-578 |
| Cow position: | chr25:4157049-4157176 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 454-578 |
| Cow position: | chr25:2414994-2414867 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 454-578 |
| Cow position: | chr25:7864528-7864403 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 98 |
| Conread position: | 454-578 |
| Cow position: | chr25:12223761-12223641 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 456-578 |
| Cow position: | chr25:17704935-17704814 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 456-578 |
| Cow position: | chr25:26679422-26679296 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 457-570 |
| Cow position: | chr25:31514378-31514259 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 458-575 |
| Cow position: | chr25:9269533-9269416 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 463-578 |
| Cow position: | chr25:7380650-7380769 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 24 |
| Conread position: | 470-578 |
| Cow position: | chr25:11855366-11855480 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.