Cow genome map
Conread name: | uFN-UNL-P-FN-cm-g-03-0-UNL.s1 |
Conread position: | 406-575 |
Cow position: | chr27:22171006-22171181 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 15, 118 |
Conread position: | 435-578 |
Cow position: | chr27:11145622-11145763 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 114 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 73, 17 |
Conread position: | 437-578 |
Cow position: | chr27:7412133-7412277 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 437-585 |
Cow position: | chr27:31248865-31248718 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 112 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 72, 9 |
Conread position: | 439-578 |
Cow position: | chr27:23760236-23760097 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 70, 84 |
Conread position: | 440-578 |
Cow position: | chr27:19653834-19653687 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 441-578 |
Cow position: | chr27:29458074-29458216 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 443-578 |
Cow position: | chr27:15865356-15865491 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 64, 79 |
Conread position: | 443-578 |
Cow position: | chr27:28896624-28896765 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 445-570 |
Cow position: | chr27:13940802-13940681 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 446-578 |
Cow position: | chr27:26112168-26112031 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 66, 12 |
Conread position: | 447-578 |
Cow position: | chr27:19576573-19576439 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 447-578 |
Cow position: | chr27:20561339-20561466 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 108 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 62, 12 |
Conread position: | 448-559 |
Cow position: | chr27:26315389-26315276 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 93 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 448-566 |
Cow position: | chr27:29614793-29614914 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 448-569 |
Cow position: | chr27:26437369-26437246 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 102 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 448-570 |
Cow position: | chr27:672415-672544 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 448-570 |
Cow position: | chr27:6660857-6660980 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 99 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 60, 80 |
Conread position: | 448-570 |
Cow position: | chr27:11982897-11982769 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 106 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 448-570 |
Cow position: | chr27:20484484-20484606 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 59, 74 |
Conread position: | 448-570 |
Cow position: | chr27:26245795-26245667 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 448-574 |
Cow position: | chr27:27450132-27450005 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 60, 83 |
Conread position: | 448-575 |
Cow position: | chr27:20055775-20055901 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 105, 61 |
Conread position: | 448-575 |
Cow position: | chr27:30914757-30914891 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 108 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 448-578 |
Cow position: | chr27:6541386-6541516 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 60, 74 |
Conread position: | 448-578 |
Cow position: | chr27:7935404-7935273 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 61, 26 |
Conread position: | 448-578 |
Cow position: | chr27:8062603-8062466 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 111 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 7, 115 |
Conread position: | 448-578 |
Cow position: | chr27:10581287-10581419 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 61, 14 |
Conread position: | 448-578 |
Cow position: | chr27:11133839-11133971 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 448-578 |
Cow position: | chr27:15867144-15867274 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 60, 78 |
Conread position: | 448-578 |
Cow position: | chr27:16965326-16965461 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 449-578 |
Cow position: | chr27:16512415-16512287 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 451-559 |
Cow position: | chr27:31479028-31479142 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 57, 106 |
Conread position: | 451-570 |
Cow position: | chr27:11208803-11208678 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 451-570 |
Cow position: | chr27:20048391-20048510 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 102 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 57, 71 |
Conread position: | 451-570 |
Cow position: | chr27:27012450-27012575 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 103 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 451-575 |
Cow position: | chr27:26983917-26984042 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 57, 71 |
Conread position: | 451-577 |
Cow position: | chr27:6751932-6752063 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 104 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 58, 126 |
Conread position: | 451-578 |
Cow position: | chr27:2592291-2592426 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 451-578 |
Cow position: | chr27:31386876-31386747 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 103 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 452-578 |
Cow position: | chr27:8790987-8790859 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 452-578 |
Cow position: | chr27:18435375-18435249 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 107 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 56, 83 |
Conread position: | 452-578 |
Cow position: | chr27:19991904-19992033 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 101 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 56, 65 |
Conread position: | 452-578 |
Cow position: | chr27:26226533-26226406 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 56, 112 |
Conread position: | 453-578 |
Cow position: | chr27:24952196-24952070 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 56, 39 |
Conread position: | 453-582 |
Cow position: | chr27:16246564-16246690 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 55, 17 |
Conread position: | 454-569 |
Cow position: | chr27:16505149-16505035 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 97 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 60, 67 |
Conread position: | 454-575 |
Cow position: | chr27:178620-178744 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 454-575 |
Cow position: | chr27:16103568-16103693 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 454-578 |
Cow position: | chr27:29399365-29399488 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 54, 68 |
Conread position: | 454-578 |
Cow position: | chr27:31373215-31373085 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 458-575 |
Cow position: | chr27:17102661-17102778 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 95 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 50, 64 |
Conread position: | 458-578 |
Cow position: | chr27:21951219-21951094 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 463-578 |
Cow position: | chr27:16705019-16705135 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 99 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 46, 61 |
Conread position: | 463-578 |
Cow position: | chr27:26909822-26909707 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 95 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 46, 62 |
Conread position: | 467-578 |
Cow position: | chr27:26188597-26188714 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 96 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 491-578 |
Cow position: | chr27:18491352-18491440 (view UCSC Genome Browser custom track) |
Alignm length: | 90 |
Alignm identity: | 80 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 18, 60 |
Show alignments to all cow chromosomes.