Cow genome map

Conread name: uFN-UNL-P-FN-cm-g-03-0-UNL.s1

Conread position: 424-575
Cow position: chr5:53055303-53055460 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 427-573
Cow position: chr5:45845439-45845584 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 30

Conread position: 428-578
Cow position: chr5:24995972-24996125 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 91, 18

Conread position: 430-578
Cow position: chr5:43839747-43839901 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 79, 137

Conread position: 433-578
Cow position: chr5:19052544-19052694 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 434-551
Cow position: chr5:28719327-28719205 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 74, 53

Conread position: 439-575
Cow position: chr5:50703806-50703948 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 439-580
Cow position: chr5:52853207-52853067 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 70, 19

Conread position: 440-570
Cow position: chr5:63763905-63763770 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 38

Conread position: 440-578
Cow position: chr5:44847787-44847923 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 68, 82

Conread position: 440-578
Cow position: chr5:46479007-46479144 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 69, 41

Conread position: 440-578
Cow position: chr5:66972670-66972527 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 66

Conread position: 442-570
Cow position: chr5:31648653-31648525 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 66, 80

Conread position: 442-583
Cow position: chr5:17987655-17987802 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 443-571
Cow position: chr5:24108821-24108955 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 444-578
Cow position: chr5:35459060-35459195 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 64, 82

Conread position: 446-568
Cow position: chr5:7675922-7676047 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 108
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 78

Conread position: 446-570
Cow position: chr5:40740091-40740223 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 446-578
Cow position: chr5:51053414-51053551 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 446-578
Cow position: chr5:55956145-55956011 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 104

Conread position: 446-578
Cow position: chr5:64061247-64061117 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 80

Conread position: 447-562
Cow position: chr5:20387388-20387267 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 447-578
Cow position: chr5:4280678-4280546 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 77

Conread position: 447-578
Cow position: chr5:12504561-12504692 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 448-552
Cow position: chr5:41757845-41757735 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 448-561
Cow position: chr5:17253996-17254109 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 59, 74

Conread position: 448-565
Cow position: chr5:21374884-21375003 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 448-566
Cow position: chr5:45337188-45337311 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 60, 107

Conread position: 448-567
Cow position: chr5:35208495-35208370 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 448-570
Cow position: chr5:43434770-43434898 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 448-570
Cow position: chr5:43611931-43611804 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 36

Conread position: 448-570
Cow position: chr5:50723279-50723152 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 57, 10

Conread position: 448-570
Cow position: chr5:57526695-57526823 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 448-570
Cow position: chr5:58401797-58401675 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 87

Conread position: 448-571
Cow position: chr5:56624282-56624412 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 448-573
Cow position: chr5:51012232-51012103 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 114

Conread position: 448-574
Cow position: chr5:36038772-36038899 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 54

Conread position: 448-575
Cow position: chr5:50101146-50101273 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 60, 74

Conread position: 448-578
Cow position: chr5:5016655-5016523 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 77

Conread position: 448-578
Cow position: chr5:6876733-6876868 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 448-578
Cow position: chr5:15770220-15770358 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 448-578
Cow position: chr5:16937802-16937931 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 75

Conread position: 448-578
Cow position: chr5:18289351-18289220 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 75

Conread position: 448-578
Cow position: chr5:26548912-26549042 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 10

Conread position: 448-578
Cow position: chr5:33273930-33273791 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 448-578
Cow position: chr5:35235456-35235591 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 10

Conread position: 448-578
Cow position: chr5:35246875-35247012 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 448-578
Cow position: chr5:42064439-42064303 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 448-578
Cow position: chr5:43858186-43858322 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 448-578
Cow position: chr5:44796502-44796635 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 448-578
Cow position: chr5:44868587-44868455 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 448-578
Cow position: chr5:57101294-57101425 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 104

Conread position: 448-578
Cow position: chr5:57497194-57497326 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 448-578
Cow position: chr5:61049565-61049430 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 10

Conread position: 448-578
Cow position: chr5:65941018-65941152 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 43, 107

Conread position: 448-580
Cow position: chr5:20127141-20127005 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 35

Conread position: 448-582
Cow position: chr5:71387431-71387301 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 78

Conread position: 448-585
Cow position: chr5:58697-58842 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 448-585
Cow position: chr5:28660463-28660321 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 448-663
Cow position: chr5:44836767-44836562 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 15

Conread position: 449-570
Cow position: chr5:7057166-7057296 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 449-570
Cow position: chr5:19752532-19752408 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 449-570
Cow position: chr5:58487604-58487481 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 449-578
Cow position: chr5:6245434-6245565 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 449-579
Cow position: chr5:14000871-14000742 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 37

Conread position: 451-566
Cow position: chr5:5030668-5030551 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 451-567
Cow position: chr5:8149080-8149197 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 58, 101

Conread position: 452-570
Cow position: chr5:45854729-45854603 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 452-575
Cow position: chr5:56643296-56643168 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 452-576
Cow position: chr5:66294225-66294101 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 452-578
Cow position: chr5:14419789-14419912 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 110
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 56, 69

Conread position: 452-578
Cow position: chr5:22210848-22210974 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 67

Conread position: 452-578
Cow position: chr5:47602036-47601910 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 452-578
Cow position: chr5:65552493-65552619 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 36

Conread position: 452-581
Cow position: chr5:41935427-41935562 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 453-570
Cow position: chr5:12902146-12902023 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 453-574
Cow position: chr5:19079470-19079351 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 453-578
Cow position: chr5:12562533-12562657 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 55, 69

Conread position: 453-579
Cow position: chr5:74050051-74049921 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 454-567
Cow position: chr5:47870828-47870943 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 52

Conread position: 454-570
Cow position: chr5:55949452-55949573 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 454-570
Cow position: chr5:57399025-57399147 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 454-570
Cow position: chr5:74690026-74690148 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 454-574
Cow position: chr5:67340107-67339985 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 454-578
Cow position: chr5:4728295-4728172 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 65

Conread position: 454-578
Cow position: chr5:17105071-17104948 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 68

Conread position: 454-578
Cow position: chr5:34288028-34288155 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 454-578
Cow position: chr5:60207931-60207806 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 53, 93

Conread position: 454-581
Cow position: chr5:59335999-59335865 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 455-569
Cow position: chr5:57447439-57447559 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 53, 109

Conread position: 455-578
Cow position: chr5:3772067-3771944 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 77

Conread position: 458-564
Cow position: chr5:41885136-41885028 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 458-578
Cow position: chr5:60523949-60523830 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 72

Conread position: 459-578
Cow position: chr5:22667291-22667169 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 459-578
Cow position: chr5:44734506-44734627 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 465-578
Cow position: chr5:16668908-16668795 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 44, 72

Conread position: 466-578
Cow position: chr5:65745554-65745667 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 98

Show alignments to all cow chromosomes.