Cow genome map
| Conread name: | uFN-UNL-P-FN-cm-g-03-0-UNL.s1 |
| Conread position: | 413-578 |
| Cow position: | chr8:41466171-41466344 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 18 |
| Conread position: | 414-578 |
| Cow position: | chr8:24419034-24419194 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 110 |
| Conread position: | 418-578 |
| Cow position: | chr8:40280932-40280765 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 422-575 |
| Cow position: | chr8:21600698-21600532 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 429-578 |
| Cow position: | chr8:53552900-53552758 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 6 |
| Conread position: | 434-578 |
| Cow position: | chr8:27954922-27955068 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 40, 130 |
| Conread position: | 436-570 |
| Cow position: | chr8:27662087-27661952 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 88 |
| Conread position: | 438-578 |
| Cow position: | chr8:55885196-55885056 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 439-578 |
| Cow position: | chr8:33664123-33663986 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 440-578 |
| Cow position: | chr8:2968803-2968659 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 440-578 |
| Cow position: | chr8:12058948-12058805 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 68, 24 |
| Conread position: | 440-578 |
| Cow position: | chr8:61277940-61278079 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 68, 97 |
| Conread position: | 441-578 |
| Cow position: | chr8:34556391-34556248 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 442-578 |
| Cow position: | chr8:20582463-20582605 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 442-578 |
| Cow position: | chr8:47667753-47667894 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 10, 123 |
| Conread position: | 444-570 |
| Cow position: | chr8:54032094-54031970 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 446-578 |
| Cow position: | chr8:4992768-4992631 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 447-575 |
| Cow position: | chr8:61848510-61848641 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 101 |
| Conread position: | 447-578 |
| Cow position: | chr8:61541804-61541669 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 447-585 |
| Cow position: | chr8:633454-633599 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 118 |
| Conread position: | 448-549 |
| Cow position: | chr8:39116348-39116241 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-549 |
| Cow position: | chr8:49560429-49560531 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 81 |
| Conread position: | 448-568 |
| Cow position: | chr8:26009100-26008974 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 448-568 |
| Cow position: | chr8:28506740-28506855 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 448-568 |
| Cow position: | chr8:52197240-52197366 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-570 |
| Cow position: | chr8:3057059-3056931 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-570 |
| Cow position: | chr8:10194283-10194155 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-570 |
| Cow position: | chr8:20112650-20112522 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 40 |
| Conread position: | 448-570 |
| Cow position: | chr8:32332255-32332383 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-570 |
| Cow position: | chr8:48182720-48182593 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 59, 104 |
| Conread position: | 448-571 |
| Cow position: | chr8:45352029-45352161 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 448-575 |
| Cow position: | chr8:17199214-17199346 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 60, 117 |
| Conread position: | 448-575 |
| Cow position: | chr8:31767821-31767949 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 10, 75 |
| Conread position: | 448-575 |
| Cow position: | chr8:36912315-36912450 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 448-575 |
| Cow position: | chr8:39556348-39556215 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 8, 121 |
| Conread position: | 448-575 |
| Cow position: | chr8:53492543-53492415 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 448-578 |
| Cow position: | chr8:8323651-8323787 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 448-578 |
| Cow position: | chr8:16061289-16061151 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 448-578 |
| Cow position: | chr8:20327636-20327772 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-578 |
| Cow position: | chr8:20783045-20783181 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 448-578 |
| Cow position: | chr8:24406426-24406558 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 124 |
| Conread position: | 448-578 |
| Cow position: | chr8:31290770-31290636 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 448-578 |
| Cow position: | chr8:38852309-38852171 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 448-578 |
| Cow position: | chr8:39968065-39968199 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 448-578 |
| Cow position: | chr8:43112635-43112763 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 448-578 |
| Cow position: | chr8:46684640-46684513 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 60, 73 |
| Conread position: | 448-578 |
| Cow position: | chr8:47679720-47679591 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 10 |
| Conread position: | 448-579 |
| Cow position: | chr8:26626087-26625951 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 116 |
| Conread position: | 448-580 |
| Cow position: | chr8:21826525-21826657 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 61, 75 |
| Conread position: | 448-584 |
| Cow position: | chr8:35816902-35817042 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 448-585 |
| Cow position: | chr8:38993946-38993808 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 74 |
| Conread position: | 449-570 |
| Cow position: | chr8:28382869-28382996 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 449-570 |
| Cow position: | chr8:57389010-57388888 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 449-571 |
| Cow position: | chr8:42378681-42378807 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 449-575 |
| Cow position: | chr8:16053907-16053779 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 449-575 |
| Cow position: | chr8:38696179-38696309 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 83, 115 |
| Conread position: | 449-580 |
| Cow position: | chr8:54306568-54306435 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 450-570 |
| Cow position: | chr8:19642681-19642559 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 450-578 |
| Cow position: | chr8:5730244-5730115 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 58, 85 |
| Conread position: | 450-578 |
| Cow position: | chr8:19785072-19784941 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 451-578 |
| Cow position: | chr8:5477641-5477768 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 57, 71 |
| Conread position: | 451-578 |
| Cow position: | chr8:6194195-6194060 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 451-578 |
| Cow position: | chr8:34092984-34092846 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 451-578 |
| Cow position: | chr8:38996869-38996738 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 452-565 |
| Cow position: | chr8:41721979-41722098 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 452-578 |
| Cow position: | chr8:31265699-31265827 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 452-578 |
| Cow position: | chr8:42762223-42762348 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 452-578 |
| Cow position: | chr8:54177501-54177632 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 453-570 |
| Cow position: | chr8:5385471-5385594 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 453-578 |
| Cow position: | chr8:11216647-11216772 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 69 |
| Conread position: | 453-578 |
| Cow position: | chr8:32243807-32243679 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 453-578 |
| Cow position: | chr8:38711798-38711676 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 453-584 |
| Cow position: | chr8:32457999-32457868 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 454-568 |
| Cow position: | chr8:11555245-11555357 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 454-570 |
| Cow position: | chr8:47225786-47225908 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 454-583 |
| Cow position: | chr8:34035883-34035754 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 457-578 |
| Cow position: | chr8:16144340-16144213 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 458-578 |
| Cow position: | chr8:1188119-1187999 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 65 |
Show alignments to all cow chromosomes.