Cow genome map
| Conread name: | uFN-UNL-P-FN-db-c-11-0-UNL.s1 |
| Conread position: | 214-412 |
| Cow position: | chr1:6968583-6968784 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 95, 29 |
| Conread position: | 215-366 |
| Cow position: | chr1:80175047-80174893 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 215-405 |
| Cow position: | chr1:57562807-57562999 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 215-406 |
| Cow position: | chr1:93391842-93392033 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 161 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 99, 120 |
| Conread position: | 215-408 |
| Cow position: | chr1:13313915-13314114 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 215-412 |
| Cow position: | chr1:23086548-23086354 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 156 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 125, 110 |
| Conread position: | 215-412 |
| Cow position: | chr1:61554236-61554038 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 47, 120 |
| Conread position: | 215-412 |
| Cow position: | chr1:81491304-81491499 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 135, 46 |
| Conread position: | 218-378 |
| Cow position: | chr1:94761502-94761341 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 138 |
| Conread position: | 220-412 |
| Cow position: | chr1:85000909-85000717 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 74, 86 |
| Conread position: | 221-342 |
| Cow position: | chr1:83390745-83390621 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 221-349 |
| Cow position: | chr1:70178138-70178269 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 221-355 |
| Cow position: | chr1:86643193-86643059 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 74 |
| Conread position: | 221-360 |
| Cow position: | chr1:33914333-33914192 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 89, 40 |
| Conread position: | 221-361 |
| Cow position: | chr1:80968817-80968673 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 221-377 |
| Cow position: | chr1:70171639-70171480 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 57 |
| Conread position: | 221-379 |
| Cow position: | chr1:57893286-57893449 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 221-385 |
| Cow position: | chr1:8142839-8143009 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 221-404 |
| Cow position: | chr1:94409168-94408996 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 88, 111 |
| Conread position: | 221-412 |
| Cow position: | chr1:4279776-4279586 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 88, 139 |
| Conread position: | 221-412 |
| Cow position: | chr1:20264708-20264513 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 88, 117 |
| Conread position: | 221-412 |
| Cow position: | chr1:20807149-20806960 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 73, 105 |
| Conread position: | 221-412 |
| Cow position: | chr1:31126996-31126804 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 89, 132 |
| Conread position: | 221-412 |
| Cow position: | chr1:40377960-40378148 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 152, 93 |
| Conread position: | 221-412 |
| Cow position: | chr1:43588495-43588677 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 89, 107 |
| Conread position: | 221-412 |
| Cow position: | chr1:55114532-55114721 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 90, 107 |
| Conread position: | 221-412 |
| Cow position: | chr1:71086877-71087064 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 89, 159 |
| Conread position: | 221-412 |
| Cow position: | chr1:83321674-83321477 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 221-412 |
| Cow position: | chr1:89915719-89915911 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 155 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 88, 139 |
| Conread position: | 221-412 |
| Cow position: | chr1:90845557-90845369 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 221-412 |
| Cow position: | chr1:92708985-92709179 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 87, 151 |
| Conread position: | 221-412 |
| Cow position: | chr1:94744715-94744901 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 89, 144 |
| Conread position: | 221-413 |
| Cow position: | chr1:57854344-57854539 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 92, 40 |
| Conread position: | 222-407 |
| Cow position: | chr1:13681137-13680947 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 223-377 |
| Cow position: | chr1:94390589-94390745 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 88, 47 |
| Conread position: | 224-355 |
| Cow position: | chr1:4264774-4264640 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 224-377 |
| Cow position: | chr1:100045938-100046090 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 224-390 |
| Cow position: | chr1:81454409-81454579 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 224-409 |
| Cow position: | chr1:31979100-31978914 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 224-409 |
| Cow position: | chr1:35544514-35544332 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 86, 155 |
| Conread position: | 224-409 |
| Cow position: | chr1:60860100-60860287 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 153 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 90, 42 |
| Conread position: | 224-412 |
| Cow position: | chr1:13992422-13992610 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 85, 104 |
| Conread position: | 224-412 |
| Cow position: | chr1:14383180-14382991 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 224-412 |
| Cow position: | chr1:17092259-17092448 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 224-412 |
| Cow position: | chr1:57357242-57357437 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 86, 46 |
| Conread position: | 224-412 |
| Cow position: | chr1:65187627-65187817 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 43, 97 |
| Conread position: | 225-372 |
| Cow position: | chr1:97447307-97447457 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 225-377 |
| Cow position: | chr1:7489325-7489170 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 225-377 |
| Cow position: | chr1:24763999-24763844 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 225-377 |
| Cow position: | chr1:46389163-46389318 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 225-377 |
| Cow position: | chr1:61606469-61606623 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 86, 74 |
| Conread position: | 225-377 |
| Cow position: | chr1:67902296-67902141 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 225-412 |
| Cow position: | chr1:24684493-24684309 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 85, 155 |
| Conread position: | 225-412 |
| Cow position: | chr1:100397423-100397601 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 226-412 |
| Cow position: | chr1:15983874-15983696 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 84, 106 |
| Conread position: | 227-377 |
| Cow position: | chr1:6309454-6309301 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 231-409 |
| Cow position: | chr1:39638892-39638714 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 64, 99 |
| Conread position: | 233-405 |
| Cow position: | chr1:24509468-24509640 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 76, 95 |
| Conread position: | 233-412 |
| Cow position: | chr1:84760718-84760532 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 238-405 |
| Cow position: | chr1:64753277-64753450 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 246-408 |
| Cow position: | chr1:93244690-93244853 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 78 |
| Conread position: | 257-412 |
| Cow position: | chr1:69702969-69703129 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 263-412 |
| Cow position: | chr1:13738112-13737960 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.