Cow genome map
| Conread name: | uFN-UNL-P-FN-db-c-11-0-UNL.s1 |
| Conread position: | 214-355 |
| Cow position: | chr3:24773230-24773082 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 91, 24 |
| Conread position: | 214-412 |
| Cow position: | chr3:60067840-60067626 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 215-412 |
| Cow position: | chr3:49850002-49850200 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 160 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 134, 120 |
| Conread position: | 218-354 |
| Cow position: | chr3:28724767-28724626 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 220-375 |
| Cow position: | chr3:48095268-48095426 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 221-334 |
| Cow position: | chr3:36780707-36780822 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 68 |
| Conread position: | 221-355 |
| Cow position: | chr3:34868327-34868191 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 88, 28 |
| Conread position: | 221-376 |
| Cow position: | chr3:48573325-48573165 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 221-376 |
| Cow position: | chr3:78548834-78548991 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 88, 78 |
| Conread position: | 221-376 |
| Cow position: | chr3:81387242-81387083 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 221-377 |
| Cow position: | chr3:6645525-6645369 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 34, 38 |
| Conread position: | 221-377 |
| Cow position: | chr3:14296294-14296136 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 73 |
| Conread position: | 221-379 |
| Cow position: | chr3:74711255-74711093 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 88, 109 |
| Conread position: | 221-405 |
| Cow position: | chr3:5619334-5619156 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 101 |
| Conread position: | 221-405 |
| Cow position: | chr3:23846752-23846568 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 221-406 |
| Cow position: | chr3:85150039-85149848 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 115 |
| Conread position: | 221-407 |
| Cow position: | chr3:84919283-84919095 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 91, 29 |
| Conread position: | 221-412 |
| Cow position: | chr3:7809896-7809712 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 89, 107 |
| Conread position: | 221-412 |
| Cow position: | chr3:7812704-7812522 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 89, 62 |
| Conread position: | 221-412 |
| Cow position: | chr3:10687961-10688156 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 221-412 |
| Cow position: | chr3:22699125-22698941 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 89, 107 |
| Conread position: | 221-412 |
| Cow position: | chr3:28207766-28207584 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 221-412 |
| Cow position: | chr3:28485494-28485312 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 89, 31 |
| Conread position: | 221-412 |
| Cow position: | chr3:33020549-33020740 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 88, 40 |
| Conread position: | 221-412 |
| Cow position: | chr3:56308283-56308469 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 129, 98 |
| Conread position: | 221-412 |
| Cow position: | chr3:58306933-58306743 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 105 |
| Conread position: | 221-412 |
| Cow position: | chr3:59205546-59205352 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 221-412 |
| Cow position: | chr3:65526013-65526202 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 221-412 |
| Cow position: | chr3:77332910-77333091 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 89, 36 |
| Conread position: | 221-413 |
| Cow position: | chr3:6049582-6049388 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 154 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 88, 179 |
| Conread position: | 221-413 |
| Cow position: | chr3:11952632-11952826 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 88, 179 |
| Conread position: | 221-423 |
| Cow position: | chr3:31360188-31360386 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 105 |
| Conread position: | 221-552 |
| Cow position: | chr3:3251540-3251217 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 73, 88 |
| Conread position: | 222-409 |
| Cow position: | chr3:1839709-1839518 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 87, 177 |
| Conread position: | 224-348 |
| Cow position: | chr3:9194971-9195098 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 224-355 |
| Cow position: | chr3:7830463-7830597 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 224-355 |
| Cow position: | chr3:11030376-11030508 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 126 |
| Conread position: | 224-407 |
| Cow position: | chr3:6762323-6762518 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 224-412 |
| Cow position: | chr3:7810270-7810453 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 135 |
| Conread position: | 225-377 |
| Cow position: | chr3:28443778-28443623 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 225-377 |
| Cow position: | chr3:32168384-32168231 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 128 |
| Conread position: | 225-408 |
| Cow position: | chr3:28464657-28464842 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 37, 133 |
| Conread position: | 225-412 |
| Cow position: | chr3:6190274-6190085 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 69, 28 |
| Conread position: | 225-412 |
| Cow position: | chr3:48091115-48091296 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 69 |
| Conread position: | 226-377 |
| Cow position: | chr3:3253753-3253907 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 226-412 |
| Cow position: | chr3:22696760-22696949 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 124, 93 |
| Conread position: | 228-327 |
| Cow position: | chr3:44437857-44437959 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 228-412 |
| Cow position: | chr3:49006241-49006057 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 122, 91 |
| Conread position: | 231-423 |
| Cow position: | chr3:77943901-77943712 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 76, 130 |
| Conread position: | 232-412 |
| Cow position: | chr3:83785629-83785817 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 235-400 |
| Cow position: | chr3:36783448-36783613 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 74, 107 |
| Conread position: | 236-406 |
| Cow position: | chr3:25899182-25899357 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 236-412 |
| Cow position: | chr3:14933233-14933055 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 58, 78 |
| Conread position: | 236-423 |
| Cow position: | chr3:45838909-45838713 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 244-412 |
| Cow position: | chr3:42257321-42257144 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 52, 69 |
| Conread position: | 248-423 |
| Cow position: | chr3:28692183-28692357 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 101, 79 |
| Conread position: | 251-413 |
| Cow position: | chr3:82515718-82515881 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 256-412 |
| Cow position: | chr3:28593208-28593364 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 70 |
| Conread position: | 258-412 |
| Cow position: | chr3:82508320-82508478 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 51, 112 |
| Conread position: | 265-405 |
| Cow position: | chr3:10215652-10215512 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 45, 61 |
Show alignments to all cow chromosomes.